Etheostoma spectabile (orangethroat darter): 116703435
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Entry
116703435 CDS
T08457
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like isoform X1
Organism
esp
Etheostoma spectabile (orangethroat darter)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
116703435
NCBI-ProteinID:
XP_032394058
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Position
15:6331820..6356906
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AA seq
721 aa
AA seq
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MATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNEDYPCEGMSRHAT
FENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPDHGTDVDYACNPSLQFISPMYFVSFVL
TAQFVLINVVVAVLMKHLDDSNKEAQEEAEMDAEIELELAQGTLCCMGAPSCGGGRVEKG
LVAAGPGGTAGGRDRGGPIRERGEGVRKMRHSAGSAHPGAYSSHDSSRTLYSPAQESQWL
DSVSLLIKDTLEGEMLMIDNLSGSVFHHYSSPSPICKDCRGHPQEQIKMAEIEQASLKSE
QLSDKSSSPNLDDLSLDEHIAYQLLVREGKGRCSSDSRSSEEAGGGGSHAGGHQTQTVVQ
SQVQGSGQPCLALSTGSEVETALQEMEMQPYMRSPHCSPGGISSSSNNKERNQRGRAASG
ISPLFHLPAEFFHPAGTAIPAPPRSRSLRLSRGLRLTSPDSWASLRSPGAHSKMLCTQCP
SHSDSSLATGSSEGSLQTTLEEGLSFSISPPQNLELPLSSAPLPLVCPLPLPEDGTAISS
PVQILRPRPSPSSAPTLQATRGHQRSQSSGRGSTSPGYTRDDSIDPSDEDLGIGIGSSIG
GCGSSQAGNSEHLSETLSSLSLTSLLSPSSLVHPGGAVKKCNSTGSLDKGGMLLSSRGRE
SRREILGLELMDPQGFLANPWTGVLVDTRRGEGRVEIGDGEQGFKGKSSSQTTVGPRRKN
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaggaatgagagccctgttggatacagtggtccaagccctgcctcaggtgggt
aacctgggcctgctcttcatgctgctgtttttcatctacgccgccttaggagtagagcta
tttggagaacttgtttgcaatgaagactacccatgtgagggaatgagtcgtcacgctacc
tttgagaactttggcatggccttccttaccttgtttcaagtctccacgggcgacaactgg
aatggcatcatgaaggacacattgcgggagtgcccaccagaccatggcactgatgtggac
tatgcctgcaatcctagccttcagtttatctcgcccatgtactttgtctccttcgtgctc
accgcccagttcgtgctcatcaatgtggtggtggccgtgctgatgaagcacctggacgac
tccaacaaggaggcccaagaggaggcggagatggatgcagaaattgagctggagctggcc
cagggcaccctctgttgcatgggcgcccccagctgcggaggagggagggtggagaaagga
ctagtcgctgctggacctggaggcacagcaggggggagggacagaggaggtccgattaga
gaaaggggagaaggagtgaggaagatgcgacattcagcagggagtgcacacccaggagcg
tacagctcccacgactccagccggaccctatactcaccagcacaagagagccaatggttg
gacagcgtatctctcctgatcaaggatactttggagggggagatgctgatgatcgacaac
ctctccggttctgtcttccaccactattcctctccttcccccatctgcaaagattgcagg
ggccacccacaagagcagatcaaaatggcagagattgagcaggcatcgctgaagtcggag
caactgtcagacaagtcctcatcccccaacctagatgacctcagcctagacgaacatatt
gcctaccagctgctggtgagagaaggcaagggacggtgcagcagtgactcccgcagctct
gaggaggctggaggtggagggagtcacgcaggaggccaccagactcaaaccgtggtgcag
agtcaggtgcaggggtcgggccagccctgtctggccctgagcactggcagtgaggtggag
actgcactacaggagatggagatgcagccatatatgcgttcacctcactgtagccctggt
ggcatttccagcagcagcaacaacaaggaaagaaaccaaagaggaagagcagccagtggc
atttctcctctcttccatctgcctgcagagttcttccaccctgcaggaacagccatccca
gcacctccccgcagtaggagcttacggttgtcgaggggccttagactgacctccccagac
tcatgggcttcgctccgctccccaggagcccatagcaagatgctctgtacacagtgccca
tcccatagtgactcatcccttgctacaggcagctctgagggcagcctccagaccaccctg
gaagagggactgagcttcagcatctctccaccgcagaacttggagctgcctttgtcatca
gctcccttaccacttgtgtgcccgctcccactccctgaagacggcactgcaatttcctcc
ccagttcagatccttagaccaaggccgagcccctcatcagcccccacccttcaggccacc
aggggccaccagcggagccagagcagtggccgaggaagcaccagcccgggctacacccgt
gacgactcaattgacccttcggacgaggacctgggcataggtattggatcgtcaattggt
ggctgtggctccagccaagcgggcaacagtgaacacttgtcagagacactaagcagcttg
tcgctgacatcactgctgtcgcccagctccctggtgcacccgggaggagcagtgaagaag
tgcaacagcacaggcagcctggacaaaggggggatgctgctgtcatcccgaggcagggag
agccgcagggagattctgggcttggagcttatggacccccaaggcttcttggccaacccc
tggacaggggtattagttgatacaaggagaggagaaggaagggtggaaataggagatggc
gagcaagggtttaaaggaaaaagctcaagccaaacaacagtagggcctcgtcggaaaaac
agatga
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