Etheostoma spectabile (orangethroat darter): 116704201
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Entry
116704201 CDS
T08457
Symbol
med13l
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116704201 (med13l)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
116704201 (med13l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
116704201
NCBI-ProteinID:
XP_032395371
LinkDB
All DBs
Position
16:18480021..18553103
Genome browser
AA seq
2105 aa
AA seq
DB search
MTTTANWVANGASLEDCHSNIFSLAELTGIKWRCYSFRGSGEYGPVISAPAQDDPVLRSF
MRCVQANLLCVWRRKIKPDAKELWIFWWGEEPNLSDVIHHELEVAEEGLWECGLSYECRT
LLFKAIHNLLERCLMDKGFVRIGKWFFKPHELEEKSLGNSEHLSCSFSFFLHGESNVCTS
VEIAQHQPAYHITEHHIRLAQTSISPVQVILSPYGLSGTLTGQAYKMSDPAARKLMEEWS
YFYPIVLQQKQGIGEKEKEEASQAYNRNCHAALEVIVGGVRMTYPAALVLIAQGDLPVEQ
PPPVPAAQGLSREPNLCSVPLTPPTSPQQPCSADSGFVTSVSSVPASDSNMGVASISPKH
SAKKLTRQVVHQAWRECYLNQPQHVSNSPSDVTPKKEVPNGVTTWDFKDLGARASCSCSR
LKQQKLNLTTTSTANPQTSANPTQSSGPSLYPPSLPKHKTSDKTEKADKQSKRPAMIPFH
HRLSVTQETSLEQDSSGGPQLGGLVALEPSLEPLATLSSCKYPKSLSNGRKAPESLLHSP
MSPLPPTLSPHPRVQDPEVLDGPLDMPVCQDGASGLGLITSETAVYTALLKQRGNGASWW
RGFRTPRTNKTDYRPCELPADKLEEVKTETATEETPLKRLYTQTHKRFKISEDRLRDHIH
TLGLFQQPGVEALREPGDDPYDFKEGDIEYTFSSSKRLKAQGREPSKKAKGEEITSNGAL
SDGKDAMSIFNSAPKSDESGQDDGAAKANPSLTREKDLVVNISDLDNIFDEDEEELGTVY
PNQHSTKLPVSTEDRPLGKEGRAAVPYPSTVADLQRMFPTPPSLEQHPAFSPIMTYRDTP
SQEPPAPSGAADHLLPLASTQFIEYRMDIEEGMASPRQEDIKPQIGSSMFGPFFCLPSQS
LPPLKIPEQCYYRPSWALMPKMEHFPVMHPQNATFLRDGYTNMPSVNTLTDQEYGQMNAT
TASVGTTAGILPSPATPRFSVPTPRTPRTPRGINAASSGQGSVKQDGTELSSPVSTPSTS
LPLSSVEPLARPGPSLPEAHSLYAILLLSDSVLNVFKDRNFDSCCICACNMNVKGADVGV
YIPDSTCEDQYRCMCGFSAIVNRRLAHGTGLFLEDELDIYGRTSEVGRAAERRLALCRRD
PAIGDPRAKRPQDAAPTSPLVMILLQEHCSQPISSLASLHLPLSCSCHGRKGALLQSWMS
EKQWADGSDACVDCYNALEQGLQYVDNHTGGKVDPAVVRSTALHSWPHTNVVDMNMLSSQ
DMVRILLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGSYGSEESPEPLP
IPTVLLGYDREREFLALSPLALTFWEKLLLEPYGGQRDVAYVVLCPNSPSLLAAARAFFQ
ELSAVYETCRLGKHRPLAQVSRDGLVHVGEEVEPEKLEELDVDQWVTGPWVGQQHTDNLS
KLKLYAYACKQQLGPRLSVLPLDSNLLLPPKVQAPLNPASSTQPTSSGQPQAWGPDGEQA
PGTVSSGNASTTQGASSDIKGPSSATPSTNTPAETPELTAEQSRIGIPTVGDSMESHANP
PAIVIYIVDAFLCSSGARNEGGEEEEVDEVEASSIWLLGLLRCYTEMLQTLPETIRPALV
LQVVPCQYLLQPASGESHFYLQQLRSLSFSCYSQCRRLLPQQTHIKSLTGFGPVSTVNAV
LKSPEHPSPLQLYTPPFILGPTRPKQPEAGEIWAELPAKYNVLFVGYCLSHDQRWILVSC
TDQQGELLETSIINIDVPNRLRRPKVSARKMGLQKLLEWCIGIIQMTSLPWRIVIGRLGR
LGHGELKDWSSLLGEHSLHSIGRQLREACRMCGISAADSPSILSACLVAMEPQGSFVIMP
DAVTMGSVFGRSTALNLQTSQLNTPQDASCTHILVFPTSATTQLAPSSYPTEDNNDDMFD
LPFPDELENDIGHDMMLITGNLHPSPNTSPVPSPGSPSGMGIGSHFQHTKSQGERLLSRD
SPPEELKQQPLALGYYVSTAQANGLPHWFWASCPQAESQCPLFLKASLHHHISIAQSDEL
VSDKTKRNPHPLDSKTTSDVLRFVLEQYNALSWLTCTPATQDRQSCLPVHLAVLIQMYNA
ILNML
NT seq
6318 nt
NT seq
+upstream
nt +downstream
nt
atgactacaacagcgaattgggtggctaacggggcaagccttgaggactgccactccaac
atcttctctctggcggagttaacgggcattaaatggcgttgctacagctttcgcggcagc
ggagaatatgggccggtgatctcggccccggcccaggacgacccagttctgcgcagcttc
atgcgctgtgtgcaagccaacctgttgtgtgtatggcgacgcaaaatcaaaccggacgcg
aaggagctgtggatcttctggtggggtgaagagcccaacctctcggatgtcatccatcat
gagctggaagtggcggaggaggggctctgggagtgcgggctgtcctacgagtgcaggacc
ctcctgttcaaggccatacacaacctgctggaaagatgtttgatggataagggatttgtg
aggattgggaagtggttctttaagccacacgaactggaagaaaagtctttgggcaacagt
gaacacctatcatgctccttctccttcttcctccacggggagagcaacgtgtgcacgagt
gtggagatcgctcagcaccagcctgcataccacatcacagaacaccacatccgcctcgca
cagacctccatctcgccagtacaagtgatcctaagtccatacggcctgagcggcactcta
acaggacaggcttacaaaatgagtgacccagcggcacggaagctgatggaggagtggagc
tacttctaccctatagtacttcagcagaaacagggaattggggaaaaggaaaaagaagaa
gcaagccaagcctacaatcgaaactgtcacgcggcactggaggtcattgtaggtggagta
aggatgacctacccagctgccttagtgctgatagcccagggggacctaccagtggagcag
cctccacctgttcctgcagctcagggcctcagcagggaaccaaacctctgcagtgtgccg
ctaacaccgccaacgtcaccgcagcagccctgctcagcggacagcggctttgtgacctcc
gtctccagtgtccccgcatcggacagcaacatgggggttgccagcatcagcccaaagcat
tctgcgaagaagctaacccgtcaggtagtccatcaggcctggagggagtgctatctcaac
cagcctcagcacgtatcaaattcgccaagtgacgtgacgcctaagaaggaagtgccaaat
ggagtaaccacgtgggactttaaagatctgggagcaagagcatcctgcagctgctccaga
ttgaagcagcagaagttgaatctgaccaccacatccactgccaacccccagactagtgcc
aaccccactcagtcctctgggccgtcattataccctccctcgctgcccaaacataagacc
agtgataagacagaaaaggctgacaaacagtccaagaggccagccatgatccccttccac
caccgtctgtcagtcacacaggagacctctctggaacaggattcctccggagggccccag
ctcgggggtcttgtggctctggagccatccttggagcctctggccactctgtcaagttgc
aagtatcccaaatctctctccaatggcagaaaagcccctgaatcccttctccattcacca
atgtctccacttccgcccacactcagcccacacccacgagtgcaggacccagaggtctta
gatggacctctggatatgcctgtctgtcaagatggggcttcagggttggggttgattacc
agcgagacagctgtgtatacagctctgcttaagcagagaggaaatggagccagctggtgg
agaggcttcaggactcccaggactaataagacggactacagaccctgtgaactccctgct
gataaattagaggaagtcaagactgagacagcaactgaggaaactccgctaaagagacta
tacacacagacgcacaagagatttaaaatctcagaggataggttgagggaccacatccac
actttaggcctgtttcagcagccaggtgtggaggcactgcgggagcctggggatgatccc
tatgactttaaggaaggagacattgagtacactttctcctcttccaagaggttaaaggct
caaggacgagagcccagcaaaaaggccaagggagaagaaatcaccagcaatggagcactg
tcggatgggaaagatgcaatgtccatttttaactcagctccaaaatcagatgaatcaggt
caggatgacggagctgccaaagccaacccttctctgaccagagaaaaagatctggtggtc
aacatctctgatctagacaacatatttgatgaagatgaggaagagttggggactgtttac
cccaaccagcactcaaccaaactaccagtatcaacagaagatcgccctctggggaaagaa
gggagagctgcagttccttatccatcaacagtagcagaccttcagaggatgtttcccacc
ccaccttctttagagcaacacccagccttctctcccatcatgacgtatcgtgacaccccg
agccaagagcccccagcgcccagcggagcggcagaccacctgctgcctttagcctccacc
cagtttattgaatacaggatggacattgaggagggcatggccagtcccaggcaggaggat
atcaaaccacaaataggctcctccatgtttggtccattcttctgcctaccaagccagagt
ctaccaccactcaagattcctgagcaatgctattatcgtccatcctgggccctcatgccc
aaaatggagcatttcccagtcatgcatccccaaaatgctactttccttagagacggatac
acaaacatgcctagtgtcaacaccctcacggaccaggagtatggccagatgaatgccacc
actgcctctgtgggtaccactgctgggatcctcccatctcctgccacaccccgcttttct
gtccccactccacgaacacctcgtacaccacggggtattaacgctgcaagctctgggcag
ggttcggtgaagcaggatggtactgagctcagctcaccagtctccacgccttccactagc
ctgcctcttagctctgtggagcccctagctcgaccaggaccctccctgcctgaggcccac
agcctgtacgccatcctcctgctctcagactccgtcctcaatgtcttcaaggatcggaac
tttgacagttgctgtatctgtgcctgcaatatgaatgtcaaaggtgcagatgtgggggtt
tatatccctgattccacttgtgaagatcagtaccgctgtatgtgtggcttcagtgctatt
gtgaacaggcggctggcccatggcacaggcctctttctggaagatgagctggatatttac
ggtcggacttctgaggtaggccgggcggccgagaggaggctggctctttgccggcgggac
ccagctatcggtgaccccagggccaagcggccgcaggacgctgcccctacctctccgtta
gtcatgatccttctgcaggagcactgctcccaaccaatttcttccctggcgtcactgcat
ctccccctcagctgttcctgtcatggccgcaagggggcactgcttcaaagctggatgtct
gaaaagcagtgggcagatggaagtgatgcttgtgtggactgttacaatgccttggaacag
ggactgcagtatgtggataaccacacaggagggaaagtagatccagctgttgttagaagt
accgcacttcactcctggccacacacaaatgtggtggacatgaacatgttgtcgtcccag
gatatggtccgtatactgctgtctctgcagcctttcctgcaggatgctatccagaagaag
agaacaggacgaacctgggaaaacatccagcatgttcagggtccactcacctggcagcag
ttccataagatggccgggagaggctcctacggttcggaggagtcaccagagcccttgccc
attcctactgtgttactgggctatgaccgggagagggagttcttggcattgtcccctttg
gcgttaactttttgggagaagttgctgctggagccttatggcgggcagcgggatgtggca
tatgtagtactgtgtcccaatagcccctctctgctggccgcagcccgagccttcttccag
gagctcagtgctgtttacgagacgtgccgtctagggaagcaccgtcctctagcccaggtg
tccagggatggccttgtgcatgtgggggaagaagtggagccagaaaagctggaggagctg
gatgtggaccagtgggtgactggaccctgggttggacagcagcacacggacaacctcagc
aaacttaaactttacgcttacgcctgcaagcagcagcttggtccccggctgtcagtctta
cctttggacagcaatcttctgttgcctcccaaagtccaggctcccttaaaccctgcatcc
tcaacccagcccacctcatccgggcagcctcaagcttggggccctgatggtgaacaagct
ccggggactgtcagttcaggaaacgcttcgacaacccaaggggcaagcagcgacattaaa
gggccttccagtgcaacaccatcaaccaacacaccagcagaaacccctgaactcactgct
gagcagtctaggatcggcatccccactgtgggtgactcaatggagagccatgccaaccca
ccagcaattgttatttatattgtggatgcttttctgtgctcaagtggagcgagaaatgaa
gggggagaggaagaagaggttgacgaggtagaggccagcagcatttggctattagggctt
cttcgctgctatacagagatgctacagactttgccggagacaataagaccggcactggtg
ctacaggtggtgccatgccaataccttcttcagccggccagtggggagagccatttctac
ctgcaacagctgcgctccctgtccttctcctgttactcccaatgcagacgtctgctgccc
caacaaacacacatcaagtccttgactggctttggaccggtttccactgtcaatgctgta
cttaagagtccagaacatcccagcccactgcagctgtacactcccccatttatccttggt
ccaacccgtccgaagcagccagaagcaggcgagatatgggcagagcttcctgccaaatat
aatgtgctctttgttggatactgcttatcacacgatcagcgctggatcctggtgtcctgc
accgaccagcagggggagctcctggagaccagcattatcaacatagatgtacccaacaga
ttgcggcgtcccaaagtttcagccaggaagatgggactacagaagctgttggaatggtgt
attggcatcatccagatgacctcactgccatggaggattgtgattggtcgattaggcaga
ctggggcacggggagctgaaagactggagctcactccttggggagcattccctccattca
ataggacgccagctgagggaggcttgtcgtatgtgtgggatatcagctgctgactctccc
agcatcctcagtgcctgcctggtagccatggagccacaaggttcctttgtgatcatgcct
gatgcagtcaccatgggctcagtgtttggccgcagcactgctctgaacttgcagacctcg
cagctgaacactcctcaggatgcttcctgtacacacatcctagtcttcccaacttctgcc
accacccagctggcacccagctcctaccctaccgaggacaataatgacgacatgttcgat
ctgccctttcctgatgaactggagaacgacattggccatgacatgatgctgataacaggg
aacctccacccttcccccaacacctctcctgtgccatcgccgggctccccatccgggatg
ggaataggatcacatttccagcacaccaagagccagggagagcgcctactgtccagggac
agtccaccagaagagctgaagcagcaaccgctggctttgggctactatgtctccactgca
caggcaaatggacttcctcactggttctgggcctcctgcccgcaggctgagagccagtgt
ccactcttcctcaaggcctccctccaccaccacatctccatagcccagtctgatgagctg
gtgtcagacaagactaagaggaaccctcaccccttagactcaaagaccacctctgatgtg
ctcaggtttgtattggagcagtacaacgccctctcctggttgacgtgcacccctgccacc
caagatcgccagtcctgcctgcctgtccacttggctgtactgatccaaatgtacaatgcc
atcctgaacatgctttag
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