Etheostoma spectabile (orangethroat darter): 116704339
Help
Entry
116704339 CDS
T08457
Symbol
rapgef1
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04510
Focal adhesion
esp04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116704339 (rapgef1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
116704339 (rapgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
116704339
NCBI-ProteinID:
XP_032395627
LinkDB
All DBs
Position
16:14442472..14488676
Genome browser
AA seq
1202 aa
AA seq
DB search
MSGKIESKQDSRSHLTSFTMKLMDKFHSPKIKRTPSKKGKQLQPEPAAKSTEKPANKKVS
RLEEHEKEVVSALRYFKTIVDKMVVEKKVLEMLPGSASKVLEAILPLVQVEARIQHSSAL
SSCHNRVYQSLANLIRWADQVMLDGIDLEDKENVASVTSVIKAVLDGVKELVKLTIEKQE
QPSPTSPNKPAPPATTAESVSSEMPLIDREPEVSKKPAPAATPVEAASDIPEEDVAPPKP
PLPEAKMAELRAQLSADAGQRRPSQKENPPPALPPKKRQSAPSPTRVAVVAPMSRGSSLP
CSVHRQQQDYEQEFLQRRFSGGSQSYGGDSPRLSPCSSMGKLSKSDEQLSSMEQDSGQCS
RNTSCETLDNTENYDPDYDFLHQDLSAGENLPPVPVGGCLSPLPESHSESSSPVPGQHPS
HPRFSAPPAQQQPEYWTPQPNPIQSYRVSAPPALPQKKRRSTQPFPDVGSRVLYERYPSQ
YDNLSEEELHPTPPFPLFTPISPMPQTNGGVFVTQYITSENADVPVSPPPLPEKKSRHIL
QYMQFVEDYSEPQPSVFYQMPQSESIYEQRNKRFQEVYGFNDSFSSTDSVHEPLLPPALP
PKQRQLASHSSSPSSSSSSSLSCHLQPSVAAMEEAGSGLGLSMSVSNSYLIGQASLTAPT
SLDQVALTNATILDGSGGGPNGSLAGSMGSVAVCLPSESSLTDSLHTSASESANDEGGEG
EYVNLYSSSQANGELPRSLRETITPDNVLQDPTPQMPSTNSKEALDKERPHQLXPIVFLS
CFESHPPLSNSLSFIFSNFLHLPCSLXSSQNDDGPDVRAGSGDILLVHATETDRKDLVLY
CEAFLTTYRTFITPEDLIKKLHYRYTRFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELT
EDILKQLMDLVFTLVCNGELSLARVLRKNILDKVEQRKLLRYTNSLKPLAARGVSARPGT
LHDFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRS
LIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLE
EYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIDGKVNFSKRWQQ
FNILDSMRRFQQVHYELKRNEDIVCFFNDFSDHLAEEALWELSLKIKPRNITRRKTEREE
KT
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaaaaatagagagcaagcaagactcgcggtcccatctgacctctttcaccatg
aaactgatggacaagttccactctcccaagatcaagaggactccatccaagaagggcaag
caactgcagcccgagccagcagccaagagtactgagaaacctgcgaacaagaaggttagt
cggctggaagagcacgagaaggaggtggtcagtgccctgcgctacttcaagacaatcgtg
gacaaaatggtcgtggagaagaaggtgctggagatgcttccaggttcggccagcaaggtg
cttgaagccatcctgcctctggttcaggtagaggcccggatacagcacagttcggcgcta
tcttcctgccataaccgtgtgtatcagagcctggccaaccttattcgttgggcagaccag
gtgatgctagatggtattgacttggaggacaaggagaatgtggcgtctgtcactagcgtc
atcaaagccgtgctggatggagtaaaggaattggtgaagctgaccatagagaaacaggag
caaccgtcgcccaccagcccgaacaaaccagcaccacctgctaccacagcagagagcgtg
tcatcggagatgcccttgatagatcgagagccagaggtctcgaaaaagccagctccggca
gctactcccgtggaggctgcctcagacataccagaagaggacgtggcccctccaaaaccc
ccccttcctgaagccaaaatggcagagctcagagcacagttgagtgctgacgctggccaa
aggagaccctctcagaaggagaaccctccgccagctcttccccctaagaagcgtcagtct
gccccttcgcctacacgggttgcagttgttgccccgatgagccgcggctccagcctgccc
tgcagcgtccacagacagcaacaggactatgagcaggagttccttcagaggcgtttctct
ggggggagccagtcctatgggggcgactctccacgcctgtctccatgcagcagcatgggg
aaacttagcaagtccgatgaacagctctcctccatggagcaggacagtggtcagtgttct
cgtaacacctcctgtgagacgcttgacaacacagagaattacgacccggattatgacttc
ctccaccaggatttgtcagctggggagaacctgcccccagtacccgtaggagggtgcctg
agccccttgcctgagtctcacagcgagtcctcttccccggtccctggacagcatccatca
catccccgcttcagtgctcctccagcacagcagcagccagaatactggacaccgcagccc
aatcccatacagtcctaccgcgtcagcgcgccccctgcccttccccagaagaagcgacgc
agcacccagcctttccctgatgtagggtccagggtgctgtatgagcgctacccctcccaa
tatgacaacttgtcagaagaggagctccaccctacaccgccattcccccttttcacaccc
atctcacccatgccccagacaaatgggggcgtgtttgtcacccagtatataaccagcgag
aatgcagatgtccccgttagcccgccgccgctgccagaaaagaaaagcagacacatcctc
cagtacatgcagtttgtggaagactactccgagccacaaccctcagttttctaccagatg
ccacagagcgagagcatctacgagcagcgcaacaagcgcttccaggaggtctacggcttc
aacgactccttcagcagcaccgactccgtccacgagccgctgctgcctccagcattgccg
ccgaaacaaaggcaactggcctcccactcttcctccccctcttcctcctcctcctcttct
ctctcctgccacctccagccgtctgtagcggccatggaggaggcaggctctgggctgggc
ctcagcatgtctgtttctaactcctacctgattggccaagcttccttgaccgcacccacg
agtttggaccaggttgccttgaccaatgccaccattctggatggcagcgggggtgggccc
aacggttccctggctggctcaatgggctctgtggctgtctgtcttccttctgagtcttct
ctcactgactctctccacacctcagcgagcgagagcgcaaatgatgaaggcggggagggg
gagtacgtcaacttgtactcatccagccaggccaatggggagctgcctcgctccctcaga
gaaacaatcacacccgacaatgtacttcaagaccccacccctcagatgccatccaccaac
agcaaagaggctttagacaaggaaagaccacatcaactctaaccaatcgttttcctctcc
tgctttgaatctcatcctcctctttctaactctctgtctttcattttctccaattttttg
cacctcccttgctctctttaatcttcccagaatgatgatggccctgacgttcgtgctgga
tcgggagatattctattagtccacgctacagaaacggatcgcaaagatcttgttttgtac
tgtgaagcctttctaactacgtataggacttttataacccctgaggacctcattaagaag
ctacactacagatacactaggttctgccacagcccagacaccttcaagaagcgagtcagc
aagaacacattctttgtgctggttcgtgtggtggatgaactgtgcttggtggagctgaca
gaggacatcttgaaacagctgatggacctggtgttcacgctggtgtgcaatggcgagctc
agcctcgcccgtgtgctccgaaagaacatcctggataaggtggagcagaggaagctgctg
cgctacactaactccctcaagccgctcgctgcccgaggcgtctctgcaaggcctggaact
ctccatgacttccgcagtcatgagatcgccgatcagctcactcttcttgatgctgagctc
ttctataaaattgagattcccgaggtgctgctctgggccaaggagcagaatgaggagaag
agtcccaacctgactcagttcacagagcactttaacaacatgagctattgggtccgatct
ttgataattcagcaggagaaagcccaagaccgagagaagctgcttctcaagttcatcaag
ataatgaagcacttaagaaagttgaacaatttcaactcctacctggcaatactgtctgcc
ctggactctgcccccatcaggagattggagtggcagaaacagacctcagagggattggag
gaatattgcacgttgattgacagctcctcctccttcagagcatacagagctgctctggct
gaggtggagcctccgtgcatcccgtacctgggtctcattctgcaggacctgaccttcgtg
cacctgggtaaccctgacctcattgacgggaaggtcaatttctccaaacgctggcagcag
ttcaacattctagacagcatgcggcgctttcagcaagtgcattacgagctgaagcgcaac
gaagacattgtctgtttcttcaacgacttcagcgaccacctggcagaggaggccttgtgg
gagctgtcgctgaagatcaagcccaggaacatcaccaggcgcaagacggaacgcgaggag
aagacatag
DBGET
integrated database retrieval system
