Empedobacter stercoris: HNV03_08235
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Entry
HNV03_08235 CDS
T06804
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
este
Empedobacter stercoris
Pathway
este00550
Peptidoglycan biosynthesis
este01100
Metabolic pathways
este01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
este00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HNV03_08235 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HNV03_08235 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
este01011
]
HNV03_08235 (mrdA)
Enzymes [BR:
este01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HNV03_08235 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
este01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HNV03_08235 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF2737
Chlorophyllase2
Motif
Other DBs
NCBI-ProteinID:
QNT14647
UniProt:
A0A9Q6Y748
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All DBs
Position
complement(1701240..1703225)
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AA seq
661 aa
AA seq
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MKKLMVVYALILFIVVLFIGRLAYLQLFTDRYTLNAFNTSIKQEIVYPNRGDILDRNGKL
LVSNTYSYELDVIPAKVVDKDGEVINDFDKAKFSKMVGISTKQFDSILTKITSAKDYKKL
SPYPFLKNISRENFARMQEQLYLYPAFSIIKRPERKYMVNSAGNILGYINEANQAYIKTD
STYYQPGDLVGIAGVEKSYEKDLRGVKGVKNWIVDRTMNVVGPYKNGDYDRAVKSGKTVN
LTIDFRLQELAEQMLKNKRGALVAIDPTNGEILALASAPTINPNDFLNSKLRNALINDSI
SRPTYDRALQGSYPPGSTFKVLTALAGMQMGTMTEQTTYVCKHGYRYGRMHIGCHCGMYY
APQGLERAIGKSCNNYFSEAYRDIVKKDPNNYGVGMNEWAAIMNSFGLGKFMGTDLPVGS
KGLIPTEDFYDSRFGEGVWNPYRIIFNGMGQGDINTTPLQMANFTAAIANKGYFYTPHIV
RRIDGKPLKDSTYIVKKNTLVDPKYFDIIHRGMRNVFTIGTARGFETSSFVQYGKTGTAQ
NSQGQDHSLFILFAPADKPKIAVAAIVENGHYGATWAGPMTSLVAELYLTDTIKRTPLLE
RMKNGNLQGEYRRQWIDYLKRKGLYIEPVKKDSLGTKAGELRTNKDSTKFKNESKQITKR
N
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagttgatggttgtttatgcgttaatcctgtttatagttgtactatttatagga
cgtttagcgtatttgcaattgtttacagatcgatatacgctgaatgcgtttaatacatct
atcaagcaagaaattgtatatcctaatcgtggtgatatccttgatcgtaacggaaaatta
ttggtgagtaatacttattcgtacgaattagatgttattccagccaaagttgtggacaaa
gatggagaagttataaatgattttgataaagcaaaattctctaaaatggttggtatttca
accaaacaattcgactcgattttaactaaaattacttcagccaaagattataaaaaatta
tctccatatccttttctaaaaaatatttcgcgcgaaaattttgctcgaatgcaagaacaa
ttgtacttgtatccagcatttagtatcatcaaacgtcccgaacgcaaatatatggtaaat
tctgcaggaaatatattaggttatataaacgaagcgaatcaagcatatattaaaacagat
tctacctattatcaaccaggtgatttagtaggaattgcaggtgttgagaaatcgtatgaa
aaagatttgcgtggtgtaaaaggtgtgaaaaactggattgtagatcgaacaatgaatgtt
gttggaccttataaaaatggagattacgatcgtgcagtaaaaagtggtaaaacagtaaac
ttaactatcgattttcgcttacaagaattagcagaacaaatgctcaaaaataaacgagga
gctctggttgcaattgatcctacgaatggagaaattttagctttagcttcagcgcctacc
attaatccaaatgattttttgaattctaaattaagaaatgctttaatcaatgactcaatt
tctcgtcctacctatgatagagctttacaaggttcgtatccaccaggttctacgtttaaa
gttttgactgctttagcaggaatgcaaatggggaccatgacagagcaaacgacttatgtt
tgtaagcacggttatcgatacggacgtatgcatattggttgtcactgtggaatgtattat
gcaccacaaggtttagaacgggcaataggaaaatcttgtaacaattatttttctgaagct
tatcgagatattgtcaagaaagatcccaataattatggcgttggaatgaatgaatgggca
gcgattatgaatagttttggacttggtaaattcatgggaactgatttaccagtaggtagt
aaaggtcttattccaacggaagatttttatgactctcgctttggagaaggggtttggaat
ccttatcgaattatttttaacggtatgggacaaggagatatcaatacaacgcctttgcaa
atggcaaattttacagctgcaattgcgaataaaggatatttttataccccacatattgtg
cgtagaattgatggaaaacctctgaaagattctacttacatagtaaagaaaaatacgtta
gttgatccgaaatattttgatatcattcatagaggaatgcgaaatgttttcacaatagga
acagctcgtggctttgaaacaagtagttttgttcaatatggaaaaacgggaacggcacaa
aactcgcagggacaagatcactctttgtttattctttttgcacctgctgataaaccaaaa
atagccgtagctgcaattgtcgaaaatggacattatggagcaacttgggcaggtccgatg
acgagtttagtagcagaattatatcttacagatacgattaaacgtacgcctttattagaa
cgaatgaaaaatggtaatctacaaggagaatatcgtcgtcagtggatagattatttaaag
agaaaaggtttgtatatagaaccagtgaagaaagattctttaggaacgaaagcaggtgaa
ttaagaacaaataaagattcaacaaaatttaaaaatgagtcaaaacagattactaaaagg
aattga
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