Escherichia sp. E4742: FEM44_04015
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Entry
FEM44_04015 CDS
T06276
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
esz
Escherichia sp. E4742
Pathway
esz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
esz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FEM44_04015 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esz03400
]
FEM44_04015 (recD)
Enzymes [BR:
esz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FEM44_04015 (recD)
DNA repair and recombination proteins [BR:
esz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FEM44_04015 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecD_N
AAA_19
AAA_30
Helicase_RecD
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
nSTAND3
T2SSE
MukB
PhoH
AAA_28
DEAD
UvrD_C
CbiA
FtsK_SpoIIIE
Bcl-2
SRP54
TrwB_AAD_bind
NTPase_1
AAA
ATPase
Motif
Other DBs
NCBI-ProteinID:
QCT86457
LinkDB
All DBs
Position
complement(833497..835323)
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AA seq
608 aa
AA seq
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MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLEN
NEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVA
RFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTT
VAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTL
HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQ
LASVEAGAVLGDICAYANAGFTAERAGQLSRLTGSHVPAGSGTEAASLRDSLCLLQKSYR
FGSNSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGDDYIAMLEEALAGYGRYLD
LLQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGR
PVMIARNDSALGLFNGDIGVALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHK
SQGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTERRSGL
AALFSSRG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcaaaagcaattactggaagctgtggagcacaaacagctacgcccgctggat
gtgcaatttgccctgaccgtggcgggagatgaacatcctgccgtcaccctcgcggcggca
ctgttaagtcatgatgccggagagggacacgtctgtttgccgctttcacgactggaaaat
aacgaggcgtcgcatccgctgttggcgacctgtgtcagtgaaatcggtgagctacaaaat
tgggaagaatgcttgctggcttcacaagcggtcagtcggggagatgaaccaacgccgatg
atcctctgtggcgatcgtctttatctgaatcgcatgtggtgtaacgaacgtacggtggca
cgctttttcaacgaagtgaatcatgccattgaggttgatgaagctctactggcgcaaacc
ctggacaaactttttccagtaagcgatgaaattaactggcaaaaagttgcggcggcagtg
gcgctgacgcggcggatctcggtgatttccggcggccctggcaccggtaaaacgacgacc
gtagcgaagttgctggcagcgttaattcagatggccgacggtgaacgctgccgtatccgt
ctggctgcaccaacgggtaaagctgccgcgcgcttaaccgaatctctcggcaaggctttg
cgacagttaccgctgaccgatgaacaaaagaaacgcattccggaagatgccagcaccttg
caccgcctcctgggcgcgcagccaggtagccagcgcttacgccatcatgcgggtaacccg
ctgcatcttgatgtgctggtggtggatgaagcgtcaatgatcgatctaccgatgatgtct
cggctgatcgacgccttgcccgatcatgcgcgagtgatctttctcggcgatcgcgatcaa
ctggcctccgttgaggctggagctgtgctgggcgatatctgcgcttatgccaatgcgggc
tttaccgcagagcgtgccgggcagttaagccgcctgacgggaagccacgttccggcggga
agcggcacagaagcggcatcactgcgcgatagtctctgcctgctgcaaaagagttaccgt
ttcggcagcaactctggcattggtcagcttgcggcggctattaatcgcggcgataaaacg
gcagtgaaaaccgtttttcagcaggattttactgatatcgaaaaacggcttttacagagc
ggcgatgattatattgcgatgcttgaggaagctcttgcgggttacggacgctacctggat
ctgcttcaggcacgtgccgagccggatttaatcattcaggcgttcaatgagtatcagctt
ttgtgcgccctgcgggaagggccgtttggcgtggctggactgaatgagcgaattgagcag
tttatgcaacagaagcgcaaaattcatcgtcatccgcactcgcgctggtacgaaggccgg
ccggtgatgattgcccgtaatgacagtgcgcttgggttgtttaatggtgatatcggtgtc
gctctggatcgcgggcaggggacgcgtgtctggtttgcgatgccggacggcaatatcaag
tcggtgcaaccgagtcgcctgccggagcacgaaactacgtgggcaatgacggtacataaa
tcacagggatcggagttcgaccatgcggcgttgattttaccgagccaacgcacgccggtg
gtaacacgagagctggtttacaccgcggtgacccgcgcgcgtcggcgtttgtcattgtat
gccgatgaacgcattttaagtgcggcaatcgccacgcgcaccgagcggcgtagcgggctg
gcagcgttgtttagttcgcggggataa
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