Echinops telfairi (small Madagascar hedgehog): 101637889
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Entry
101637889 CDS
T08707
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04613
Neutrophil extracellular trap formation
etf05014
Amyotrophic lateral sclerosis
etf05034
Alcoholism
etf05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
101637889 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101637889 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101637889 (HDAC6)
09165 Substance dependence
05034 Alcoholism
101637889 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
etf01009
]
101637889 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101637889 (HDAC6)
04131 Membrane trafficking [BR:
etf04131
]
101637889 (HDAC6)
03036 Chromosome and associated proteins [BR:
etf03036
]
101637889 (HDAC6)
Enzymes [BR:
etf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101637889 (HDAC6)
Protein phosphatases and associated proteins [BR:
etf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101637889 (HDAC6)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101637889 (HDAC6)
Membrane trafficking [BR:
etf04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
101637889 (HDAC6)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
101637889 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
101637889
NCBI-ProteinID:
XP_045144246
LinkDB
All DBs
Position
Unknown
AA seq
1162 aa
AA seq
DB search
MKKGDSGARSSTGRREVGGVKGGRDLRKGVPSDPVGASVDQTMTSTGQDSTSTRQLRSRQ
PPASPPHSSSEDTTMRTVKTDAAVPSSLSLAEVKKKGRMKKLSQATGQDLISGLEELDLN
RETKALSHTGLVFDEQLNDFYCLWDDSFPESPKRLYAIKEQLTQEGLLDRCISIQARFAQ
KKELMLVHSKEYVDLMESTQHMNEAELRALADTYDSVFLHPKSYSSTCLASGSVLMLVDA
VLEAKVRNGMAIIRPPGHHAQHSRMDRYCMFNHVAVAARYAQEKYGVPRILIVDWNVHHG
QGIQFTFEEDPSVLYFSIHRYEHGQFSPHLKASNWSATGSSRGQGYNINVRWNQVGMRDA
DYIAAFLHILLPVAFEFQPELVLVAAGYDALQGDPKGKMAVTPAGFAHLTHLLMGLAGGK
LILSLEGGYNCRSLAEGVSASLHTLLGDPCPILESLGAPCISARNSISCTLIALEPFWQV
LVQAAVTLKEDEEMAKDVDPLEPAAPQILTWPVLQARTGLIYDQRMMSHYNLKDNYHPEK
PQRISRIASHLEEWGLSERCLTLPARPATDAELLTCHSAEYITHLRATEKMKPRELHREA
SNYDSIYICPSTFTCAQLATGSVCHLVEAVLAGKVLNGTAVVRPPGHHAERDAACGFCFF
NSVAVAARHAQAISGRALRILIVDWDIHHGNGTQHMFEDDPSVLYISLHRYDRGTFFPMG
NEGASNQIGQAPALGFTVNVAWNGSQIGDPDYLTAWHRLVLPIAYEFNPELVLVSAGFDA
ARGDPLGGCQVSPDGYAHLTHLLMGLANGRIILILEGGYNLTSISESMAACTRTLLGDAP
PLLARMRPPLSRALVSISETVYIHHRYWRSVQIKRVEVKEEEPSNSELITKKKQQPAIPT
SAKGMATPKANIQEADMKEATLASAVEESTPGQAKSNTTVAKLTQDQSLEAATSETVLNQ
TPSVETLGDTTLTSCTDSQTPQSSTVQGTTPHGSPSHQDESLGTLDLSQKAEEAPASPIP
EEEKLLGEAAGGQDLDDSIVVGFEDSDEATFWAVTPLPWCPHLTEVCPIPATGLDVTQPC
GVCGTLQENWVCLSCYQVCCSRYVKAHMIRHHEETGHPLVLSFVDMSTWCYHCQAYVHHQ
TLIDVKNTVYQNKFGEDMPQPH
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagggggacagtggagcccgcagctctaccggcagacgggaagttggcggcgtg
aagggggggcgggacctgagaaagggcgtgccctcggaccctgtaggggcctcagttgac
cagaccatgacctccacaggccaggattccacctcaaccagacagctaaggagtaggcag
cccccagcctcgcctccccacagctccagcgaggacaccacgatgcgaactgttaagacg
gatgctgcagttccctccagccttagtctagctgaggtaaagaagaaaggcagaatgaag
aagctcagccaagcaacagggcaggatttaatctcagggctggaagagctggatctgaac
cgtgagacaaaagcattgtctcacacaggcttggtgtttgatgagcagctcaatgacttc
tactgcctctgggatgacagtttccctgaaagccctaagcggctctacgccatcaaggag
cagctgacccaggaaggcctcctggatcgctgtatctccattcaggcccggtttgcccaa
aagaaggaactgatgctggttcacagcaaagaatacgttgatctgatggagtcaacccag
cacatgaatgaggcagaactccgtgccctagcagacacttatgattcagtttttctgcat
ccaaaatcatactcctctacctgcctggcctctggctctgtcctcatgctggtggatgca
gttctggaggcaaaagtccgaaatggcatggccatcatcaggcctcctggacaccacgcc
cagcacagtcgtatggatcggtattgcatgttcaaccatgtggctgtggctgctcgctac
gctcaggagaagtatggtgttccaagaatccttatcgtggattggaatgtacaccatggc
caaggaatacagttcacctttgaggaggaccccagcgtcctctatttctccatccaccgc
tatgagcatggccagttctcacctcacctgaaggcctctaactggtcagccacaggctcc
agccgaggccaaggatacaacattaatgtgcgttggaaccaggtggggatgcgggatgcc
gactacattgctgcgttcctgcacattctcctgccggtcgccttcgagttccagcctgag
ctggtcctggtggctgctggctatgatgctctccaaggggaccccaagggcaagatggcg
gtcactccagcagggttcgcccacctaacccacctgctcatgggtctggccggaggcaag
ctgatcctgtctctggagggtggctacaactgtcgctccctggctgagggtgttagtgcc
tccctccacacccttctgggagacccgtgtcctatactggagtcacttggtgccccctgc
ataagtgcccgaaattcaatctcctgcactctgatagccctggagcctttctggcaggtc
ctggtgcaagccgctgtgaccctcaaggaagacgaggagatggccaaagatgttgaccca
ttggagcctgctgccccccaaatcctgacctggccagtgctgcaggctcgcacaggacta
atctatgaccagcgcatgatgagtcactataacttaaaggacaactaccaccctgagaag
ccccagcgcatctcgagaattgccagccatctggaagagtggggcctcagtgagcgctgc
ctcaccctgcctgcgcgccctgccacagatgctgagctgctcacctgccacagtgctgag
tacatcactcatctgagggccacagagaagatgaaaccccgtgagctacaccgggaggcc
tccaactatgactccatttatatctgccccagcaccttcacctgtgcgcagctcgccact
ggctcagtctgccacctagtggaggctgtgctcgctggaaaggttctaaatggtacagct
gtggtgcgccctccaggacaccatgccgagcgggatgctgcttgtggtttctgctttttc
aattctgtggctgtggctgctcgccatgcccaggccatcagtgggcgtgctttgcggatc
ctgattgtggattgggatatccatcatggtaatggaacgcaacacatgtttgaggacgac
cccagtgtgctctatatatcacttcaccgctatgatcgtggcaccttcttccccatgggg
aatgaaggtgcaagcaaccagattggccaggcccccgctttgggcttcactgtcaacgtg
gcctggaatggatcccaaataggtgaccctgactacctgactgcctggcatcgtctagtg
cttcccattgcctatgagtttaacccagaactggtgctagtctcagctggctttgatgcc
gcccgtggagaccccttggggggctgccaggtatcccctgatggctatgctcacctcacc
catctgctgatgggccttgccaatggccgcattatcctaatcctcgagggtggctataat
ctgacgtccatctcggagtccatggcagcttgtacccgcaccctccttggggatgcacca
cccctgctggcccgtatgcgacccccgctatcaagggccctggtctcaatctcagagacc
gtctacatccatcacagatactggcgcagtgtgcagatcaaaagggtagaagtcaaggag
gaggaaccctccaattctgagttgatcaccaagaagaaacagcagccagccattcccaca
tcagccaaggggatggccacaccaaaagcaaacattcaggaagcagacatgaaggaagct
accttagcatcagctgtggaagagtccactccaggccaagctaagtcaaacacaactgtg
gccaaactcactcaagaccagtccctggaggcagccaccagtgagaccgtgctgaaccag
accccttcagtggagactcttggggacaccacgttaacttcttgtactgacagccagact
ccacagtcttcaactgtgcagggaaccactcctcacggatcccctagtcaccaggacgag
agtctcggaaccttggacttaagccagaaggctgaggaggccccagcttctccaatccca
gaagaagagaagctactaggagaggcagctggaggtcaggacctggatgattccattgtg
gtgggctttgaggacagcgacgaggccacattttgggctgtgacaccattgccctggtgt
ccccatttgacggaagtatgccccataccagcaacaggcctggatgtgacccaaccttgt
ggggtctgtggaaccctccaggagaattgggtgtgtctgtcttgctatcaggtctgctgc
agtcgttatgtcaaggcccatatgatccgtcaccatgaagaaacaggccacccgctagtc
ctcagcttcgtcgacatgtccacctggtgttaccactgccaggcctatgtccaccaccag
actctcattgatgtgaagaacacagtttaccaaaacaagtttggggaggacatgcctcag
ccacattaa
DBGET
integrated database retrieval system
