Echinops telfairi (small Madagascar hedgehog): 101642443
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Entry
101642443 CDS
T08707
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101642443 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etf03036
]
101642443 (MBD4)
03400 DNA repair and recombination proteins [BR:
etf03400
]
101642443 (MBD4)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
101642443 (MBD4)
DNA repair and recombination proteins [BR:
etf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
101642443 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
101642443
NCBI-ProteinID:
XP_045145980
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MASRSLGDRGTDPAVASSELPAPGRSRDLREEDSAPASGRMREDEKQRVIKSGSECNPLL
PELIASAHLGGTAVTQCHKSIPSGWERVVKQRLSGKTAGRCDVLFISPQGLKFRSKRSLA
NYLHKTEESRLKLDDFDFAVLSERNIKSSKEALSSQVQKECVDSNWNLRTKRKPKNDVVF
LPRDSSDSTGLSNPAPIHSLLKEDEDVNDVKPRKVRKSKGKMTIMKGIQIKKTKTGCWKS
SLSGSVQRRRTRGSLYTTADVEGEPAAQESQPGTSDAPARTESPAVTDEERGPVQEKPLS
PRSHVHSGKLTSNKTEHKKCQNTFLDSEEIRNKVEVREKKHLHVDIKCDSEPDNCHSQAE
KNFTAVRIFQEDMPVPRTQIEKRKTSLYFSSKYNKEALSPPRRKAFKKWTPPRSPFNLVQ
ETLFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAEVARSADWRDVSELLKPLGLY
DLRAKAIVKFSDEYLTKKWKYPIELHGIGKYGNDSYRIFCINEWKQVHPEDHKLNKYHDW
LWENHEKLNLS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcggagcctgggggaccgcggaactgaccccgcagtcgcctctagtgagctc
cctgccccaggccgatcgcgtgaccttcgtgaggaagatagtgctccggcatcaggaaga
atgagagaagatgagaaacaaagggtgataaaaagtggcagtgaatgtaatcccctgctc
ccagaactcattgcttctgctcacttgggtggtactgcagtgacacagtgccataagtct
atcccctctggttgggaacgagttgtgaagcaaaggttatcagggaaaacggcaggaagg
tgtgatgtgctttttatcagccctcaaggactgaagttcagatccaaaaggtcacttgct
aattatcttcacaaaactgaagagagtcgtcttaaactggacgattttgattttgctgta
ctgtctgaaaggaacatcaaatcaagcaaggaagcgctctcatcccaagtgcaaaaggaa
tgtgtcgattcaaactggaacctcaggaccaaaaggaagccgaaaaatgatgtggttttt
ctcccacgtgatagttcagatagcaccggactttctaaccctgctcccattcactcattg
ttgaaagaagatgaagatgttaatgatgttaagcccagaaaggttagaaaatcgaaagga
aagatgactattatgaaaggaattcaaattaagaaaaccaaaacagggtgctggaagagt
agtctgtcgggttctgttcaaaggaggaggacaagggggtctctgtataccacagcagat
gtggaaggtgagcctgctgcacaagagagtcagcccggcacttctgatgccccagctagg
actgagagcccagctgtgactgatgaggaaaggggacctgtccaggagaagccgttatct
cccagatcacatgttcattctgggaaactaacttcaaacaagacagagcacaagaagtgt
caaaatacctttctagactctgaggaaatcagaaacaaagtagaagttagagagaagaaa
cacttacatgttgacatcaaatgtgactctgagccagacaattgccactcacaagctgag
aaaaactttactgctgtgaggatatttcaagaagacatgcctgttccacggacacaaata
gaaaaaaggaaaacaagcctatatttttccagcaaatataacaaagaagctcttagccct
cctcgacgaaaagcctttaagaagtggacacctcctcgatcaccttttaatcttgttcag
gaaacgctgtttcacgatccttggaagctcctcatcgcaactatctttctcaatcggacc
tcaggcaaaatggcaatacctgtgctttgggagtttctggagaagtacccttccgctgaa
gtagcaagaagcgctgactggagagacgtgtcagagctgctcaaacctctcggtctctat
gatcttcgagcaaaggccattgtcaagttctcagatgaatatttgacaaagaagtggaag
tatccgattgagcttcatggaattggtaaatacggcaacgactcttaccggattttttgc
atcaacgaatggaaacaggtacaccctgaagaccataagttaaataagtaccatgactgg
ctttgggaaaatcatgaaaaattaaatctatcttaa
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