Empidonax traillii (willow flycatcher): 114055977
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Entry
114055977 CDS
T05887
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03013
Nucleocytoplasmic transport
etl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114055977 (PNN)
03015 mRNA surveillance pathway
114055977 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114055977 (PNN)
03041 Spliceosome [BR:
etl03041
]
114055977 (PNN)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114055977 (PNN)
Spliceosome [BR:
etl03041
]
Complex C
Other components
EJC/TREX
114055977 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
114055977
NCBI-ProteinID:
XP_027736526
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPPQNRLLALTGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGASSRLGGERRTRRESRQESDAEDDDIKKPALPSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVAIATERQKRRQEIEQKLE
VQAEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTK
PHLFYIPGRMCPATQKLMEESQKKMNALFESRRNEFAEQINKMEARPRRQSMKEKEQQEV
QNEEKKEEQNKEQEEGKVAQQVEEMETGNQHNDVEMEEAGEEKGKIGSGHSDAEKEQEED
EQKHDVEFKVEETTEVRENDKQQDGQHEEVTIIKVESENIQPVDNEQDVAEMNEADSVEP
VENENGKEVEPETECDAQPEKVCNDPSPKKEKGIKTENKAELEEMQEKAPEAQTEAVAEA
LSQPHSEPLPQSPQLSQSTQDIEPQADKDENAVVSVKVVEAQAEQNQTPSLESKSKTRSR
SRGRAGNKTGKSHSRSSSSSSSSTSSSTTSASSSSTGSSTSRSSSTTSSTTSGSTSRDSS
SSSSSSSESRSRSRGRGHNRDRKRRRSTDRKRRDASGVDRSHKSSKGGSRDTKSSKDKSS
RSDRKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcgcgcgctgcaggagcagctggagaaggccaaggagagcctcaag
cacgtggacgagaacatccgcaagctcacgggccgggaccccaatgacgtgaggcccccc
cagaacaggttgttagccctcacaggccccggtggaggtagagggcgcgggagcttattg
ctgaggcgtggattctctgatagtggaggaggacccccagccaaacagagggatcttgaa
ggtgcatccagtaggctgggtggagaacgtcggacaagaagagaatcacgccaagaaagc
gacgcagaggatgacgatattaaaaagccagcgttgccatcttctgttgttgctacctcc
aaagagcgaacgcgtcgagaccttatacaagatcaaaatatggatgagaaaggaaaacaa
aggaatcgacgtatatttggcttgttgatgggcactcttcaaaaatttaaacaggaatcc
acagttgctattgctactgagaggcaaaagagacgacaagaaattgaacaaaaacttgaa
gtgcaggctgaggaagaaagaaagcaagttgaaaatgagaggcgagaactgtttgaagaa
agacgtgctaaacagacagagctgcggttacttgagcaaaaggttgagcttgctcagttg
caagaagaatggaatgaacataatgctaaaataataaaatacataagaacaaagacaaaa
ccccatttattctacatacctggcagaatgtgtcctgctacgcagaagttgatggaagag
tcacagaaaaagatgaacgcactctttgaaagcaggcgaaatgaatttgcagaacagatt
aacaaaatggaggccaggcccagaagacaatctatgaaggaaaaagaacagcaggaggtg
cagaatgaagaaaagaaggaagaacagaacaaggagcaggaagagggtaaggtggctcag
caggtggaagagatggagacaggtaatcagcacaatgatgtagaaatggaggaggcaggg
gaggaaaagggaaaaataggttcagggcatagcgatgcagagaaagaacaggaagaggat
gaacagaaacatgatgtggagtttaaagtagaggagactactgaagtgagggagaatgac
aagcaacaggatggtcagcatgaggaggtcaccattataaaagtggagagtgaaaacatt
cagccagtggataatgagcaggatgtggctgaaatgaatgaggcagatagtgtagaacct
gtagaaaatgaaaatggcaaagaagtggaaccagagacagagtgtgatgctcagccagaa
aaagtgtgtaatgatccttctcccaagaaggagaaaggtatcaaaacagaaaataaagct
gaacttgaagaaatgcaggagaaagctcctgaagctcagacagaagctgtggctgaggct
ctgtctcagccacactctgagccactgccacagtcacctcagttgtctcagtccactcag
gatatagagccccaggcagacaaggatgaaaatgctgtggtgtctgtaaaggtggttgaa
gcacaggcagagcagaatcaaacaccaagtctagaaagtaagagtaagaccaggagtaga
agcaggggtagggcaggaaacaaaactggtaagagtcatagccgcagcagcagcagtagt
agcagtagtacttcaagcagtactactagcgcaagtagctccagcactggcagcagtact
agtcggagtagttccaccaccagtagcactacaagtggaagtactagcagggatagtagc
agcagtagctctagtagtagtgaaagtagaagtcgaagccgaggaagagggcataacaga
gatagaaaacgcagaaggagcacggacaggaagcgaagggatgcttcaggagtagataga
agtcacaagtcctcaaaaggtgggagtagagataccaaaagctcaaaggataaaagttca
aggtctgacagaaagaggtcaatatcagaaagtagtcggtcaggcaagagaacttcacgg
agtgaaagagaccgtaaatcagacaggaaagacaagaggcgttaa
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integrated database retrieval system
