Empidonax traillii (willow flycatcher): 114056371
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Entry
114056371 CDS
T05887
Symbol
RNF111
Name
(RefSeq) E3 ubiquitin-protein ligase Arkadia isoform X1
KO
K10635
E3 ubiquitin-protein ligase Arkadia [EC:
2.3.2.27
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114056371 (RNF111)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114056371 (RNF111)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114056371 (RNF111)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF111_N
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
114056371
NCBI-ProteinID:
XP_027737334
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MAPKSCVSFRCVRAGHKWVLSGSLPWRWGGSNTWVVSLLLKALPSLNLSMSEWTPECNIV
YTPEADMKSEVPSDAPKSQESLKGILLNPEPIGAAKSFTAEVEMIASKVGNEFSHLCGDS
QKQKDMNGNHTDQEKSIVRKKRKSQQAGPSYTQNCPDKENKGILGLRQHLGTQSEDNDSS
FSDCISSPSSSLHFGDSDTVTSDEEKDAPVRHPQAVLNPASRTHSARSHKWPRTEADSVP
GLLMKRPCFHNSSLRRLPYRKRVVKTGSSQRTQNQKERILMQRKKREVLARRKYALLPSS
SSSSENDLSSESSSSSSTEGEEDLFVSTGENHQNSTVVPSGSIDEDVVVIEASSTPQVTA
NEEINVTSTDSEVEIVTVGENYRSRSALGHTRSHWGQSSGSHAPRPPEQRNRSRISTVIQ
PLRQNAAEVVDLTVDEDEPTVVPTTSARVEPQVVSSASSNSSSTSTSEQASDAAPTISTS
QPSAAPETTPSLSSGSTAGTSAGDDIRRTSSNTTLETGPPAMPRLPSCCPQHSPCGGPSQ
THHALGHPHTSCFQQHGHHFQHHHHHHHNPHPTVPLSPSFSDSSCPVERPPPVPAPCGAS
SSSGTTYHDQQALPVDLSSSGIRSHGSGAFHGTSAFDPCCPGSSSRTTIYGHQAGAGPSQ
SLTIDGYGSSIVAQPQPQPPPPASLSSCRHYMHSPYASLTRPLHHQASACPHSHGNPPPQ
PQPPPQVDYVIPHPVHPFHPSISSHASSHPVPPPPPTHPLANAAAPIPQHLPATHQPISH
HIPATAPPAQRLHPHEVIQRMEVQRRRMMQHPTRAHERPPPHPHRMHPNYGHGHHIHVPQ
TMSSHPRQAPERSAWELGIEAGVTAATYPPGPLHPHLAHYHAPPRLHHLQIGALPLMVPD
MAGYPHIRYISSGLDGTSFRGPFRGNFEELIHLEERLGNVNRGATQGTIERCTYPHKYKK
RKLHCKQDAEEGTEEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPI
CRVDIEAQLPSES
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaagtcttgtgtcagcttccgctgtgtcagggctggacacaaatgggtcttg
tctggctctctgccctggagatggggaggtagcaatacttgggttgtctcacttttgctg
aaggccttgccttccttaaatctttccatgtctgaatggactcctgaatgtaatatagtc
tatactccagaagcggatatgaagagtgaagttccttctgatgcaccaaagagccaggag
agtctgaaggggatcctcttgaaccctgagcctattggggcggccaaaagcttcactgca
gaagtcgagatgattgccagtaaagtagggaatgagttctcccacttatgtggtgactct
caaaagcagaaggacatgaatggcaaccatacagaccaagaaaaaagtattgtgcgaaaa
aaacgcaagagccagcaggctggtccttcctacactcagaactgtcctgataaggaaaac
aaaggaatcttgggattgaggcagcatctaggaacacagagtgaggacaatgactcttct
tttagtgactgtatctcttcaccttcttctagcttacactttggagactctgacacagta
acatctgatgaagagaaggatgctcctgtcagacaccctcaggcagtgctgaatcctgcg
agcagaactcacagtgcccggtcacacaagtggcctcgcactgaggcagactctgtgccc
ggattactcatgaaaaggccctgttttcacaacagctctttaagaaggctcccatatagg
aaaagagttgtgaaaacaggctcatcccagcggacacagaaccaaaaagaacggatttta
atgcagaggaaaaagcgggaggtgctggctcgcaggaagtacgcgctgctgcccagctcc
agcagctccagcgagaacgatctcagtagtgaatcttcctccagttcatctactgaaggg
gaggaagacttatttgtgtcaactggtgaaaaccaccagaacagtacagttgttccttca
ggaagcattgatgaagatgttgtggtgattgaagcatcctccactccccaggtcactgct
aatgaagaaataaatgttacctcaacagacagtgaagtggagattgtcacagttggtgaa
aactacaggtctcgttccgcacttggacacacaagatcccactggggccagagctctggc
tctcatgctccacgacctccggagcagcggaaccgcagcaggatctccacagtcatccag
ccgctgaggcagaatgcagccgaggtggtggacctcacggtggatgaggatgagccaaca
gttgtgccaaccacttcagctcgagtggagccgcaggtcgtgagttctgcttccagtaac
agttccagtacctctacctcagagcaggcctctgatgcagctcccaccatctccaccagc
cagccctctgcagctccagagacgactcccagtctttccagtggcagcactgctggtact
tcagctggagatgacataagaagaacttcatctaatacaacactggaaactggccctcca
gccatgccaaggttaccatcctgctgccctcagcattctccttgtggaggaccttcacag
actcatcatgccttggggcacccacatacgagctgctttcagcagcatggccaccacttc
cagcatcaccaccaccaccaccacaaccctcacccgactgtgccactctccccttcgttc
agtgactccagctgccctgtggaaaggcctcccccagtgcctgccccatgtggagcaagc
agcagttctggcaccacttaccatgaccagcaggcactgccagtagacttaagcagcagt
ggtataagaagtcatggaagtggtgcttttcatggaacatctgcctttgatccttgctgt
cctggttcttcatcccgaacgacgatctacgggcaccaggctggggctgggccgagccag
tccctgacaatagatggatacggatcgagcattgttgctcagccacagccccaacctcct
cctccagcatcactctcctcctgtcgccattacatgcactctccttatgcttccttgacc
agacctcttcaccatcaagcttctgcatgtcctcactctcatggaaatccccctccacag
ccacaacctccacctcaagtagattatgttatccctcatccagtgcatcccttccatcct
tcaatctcctctcatgcatcttctcatcctgttccacctccaccaccaactcatccttta
gccaatgcagctgctccaatcccacagcatcttcctgcaacacaccagcctatatcccat
cacatccctgcaacagcacctccagcacagaggctacatcctcatgaagtgatccagagg
atggaggtccagagaagaaggatgatgcaacacccaacacgtgctcatgagcggcctcct
ccacatcctcacagaatgcatcccaattatgggcacgggcatcacattcatgtgcctcag
actatgtcttcccatcctcgccaagctccagagagatctgcctgggaactaggaattgaa
gctggtgtgactgcagctacttaccctccagggcctttgcatcctcacttggcccactac
cacgcacctcctcgactgcatcatttgcaaataggggcactccctctaatggtaccagac
atggcgggctaccctcacatccgttacatttcatcgggattggatggaacatcattcaga
ggccctttcaggggcaattttgaggaactgattcacttggaggaacgattaggcaacgtg
aatcgtggagcaacacagggaactatagaaagatgcacatatccacataaatacaaaaag
aggaaactgcactgcaaacaagatgcggaggaaggaacagaagaagacacagaggaaaag
tgtaccatctgtttgtctatcttggaggaaggtgaagatgtcaggcgccttccgtgtatg
caccttttccaccaagtctgtgtagatcagtggttgattactaacaagaagtgccccatt
tgcagagtggacattgaggctcagctgcccagtgaaagttga
DBGET
integrated database retrieval system
