Empidonax traillii (willow flycatcher): 114056448 Help Entry 114056448         CDS       T05887                                  Symbol COL20A1 Name (RefSeq) collagen alpha-1(XX) chain   KO K24357   collagen type XX alpha Organism etl  Empidonax traillii (willow flycatcher) SSDB OrthologParalogGFIT Motif Pfam:  fn3 VWA Collagen Pur_ac_phosph_N VWA_2 DUF4998 CBM_4_9 Motif Other DBs NCBI-GeneID:  114056448 NCBI-ProteinID:  XP_027737458 LinkDB All DBs Position Unknown AA seq 1471 aa AA seqDB search MLIHTWFFFACLPVVSHVWGRVGQGSGRLKLTVLSEDRLQMKWKETEGNISGYKVRVKPM AGDSEQEVMLKTKTPKATVGGLSPTKEYTLQVYVLNGSQEALFAKRKFVIEELKNASQTR SNRRNAGAAPGKNLTSLGSSAAEHSGVAEATPPPLNTVLTQTAKDRAEKKRQKGIQPKGS GEITRHQPSVEAAVTEATSVTPKSSPRTPANSESLGREKPTKDSLRRGSQFQCDTPAMTD IVLLVDGSWSIGRNNFKLIKEFLSNLVSPFNIARDKIRVGLSQYSSDPRTEWDLSAHSTR EQLLEAIRNLRYKGGNTFTGLALTHALEQNLKPDAGARLEAEKLVILLTDGKSQDDANLA AQTLKNLGIEIFAIGVKNADEAELKQVASEPLELTVYNVLDFPLLSSLVGKLTRVLCTRI KEKSNKETTGSTVKDFPVNTGPQLSPTDLKISAVTSKSMNLTWSPPLRPPKKYRVVYYPS KGGTPREVVLDGAVSSLRLSNLTSHTEYLVSVLPVYDTAVGDGLRGVTSTLPLSPPRSLR VSELSHNSIRLSWKAAQGATHYLVLCSAAPDGAEDYTAEVKVTQPEVLLDGLSPSTEYSI AVYAMYGEDASDPTSIQETTLALSPPRFLSFSELSHASVRVSWEAVSAAVRAHHVTYVSS RGGNTGEVEVPGTATSTVLRPLSSLTQYFISVRSTYDEGDSFPITGNVTTLKVPPPRALK VAELSGNSLRLQWEAVAASDVVVYQIKWSTASGEKPQELSIAGNVATAVLPGLQKNTDYK ISIWAYYKDGARSDTVSVHHRTNSRSPPTNLFIDSETPTSLQVHWTPPDGRVQHYKITYS PVSDAGAQQTIMASGKSSSVTLQPLLPDRAYKVTISAIHYTGESESTSTTGRTAPVLSKF PSIRGFVPPKPEACPTISSAEGSVRGFDMMEVFGLVEKEYSSIKGVAMEPFVFSSSRTFT LFRDIQLTQRTSDIHLFAIPPEHTISILLRLLPDTPKEPFAVWQITDEDFQPLLGVNLDP SKKSLTYFNHDYKADLQEVSFDQQEVKKIFYGSFHKVHVAVSHFKIKLYLDCKKIAEKPI STVGSISTAGFTMLGKVTRTRGPRSGSAPFQLQSLKILCSSTGAEEDRCCDLPALRDEET CPTLAPACTCTSGRPGLPGPPGPPGSPGRRGPQGEQGEPGPKGEPGPPGQVGPAGPSGQQ GSPGSQGITVQGPVGPPGIKGEKGDTGSPGMQGIPGVQGAPGRDGLQGAKGVRGLEGTAG PPGPPGPRGFQGATGTRGSSGEKGPPGDVGPTGLPGPKGERGEKGEPQSLATIYQLVSQA CERMIQTHVLKFDSFIHEHARKPVPMWEERLKPGEPGPPGPPGPPGSNGERGENGIPGRP GKDGYPGERGAPGPKGEKGMSGASEEGSQGPRGRTGPPGEVVLGKPGPKGYPGNAGPQGF PGARGQPGQPGHPGDCDISGCYGAGRRDFVP NT seq 4416 nt NT seq  +upstreamnt  +downstreamnt atgctgattcacacttggttcttttttgcctgtctgcctgtggtgagccatgtctgggga cgagtaggtcaagggtcaggccgcctgaaactcactgtcctttctgaagacaggctccag atgaagtggaaagagactgaagggaacatcagtggctataaagttcgggtaaagcccatg gcaggggactcagagcaagaagtcatgctgaaaaccaagactcccaaagccacagtggga gggctgagccctaccaaggaatacacgctgcaggtctacgtgctcaacggctcccaggag gccctgtttgccaagaggaaatttgtgatagaggaactcaaaaatgcatcccagactcga agtaacagaagaaatgcaggagctgccccaggaaagaatctcacctctttgggcagctcg gcagctgagcatagtggggtggctgaggccaccccaccacccctgaacactgtcctgacg cagacagcaaaggacagagctgaaaagaaaaggcagaaggggattcagccaaagggctca ggagaaatcacaagacaccagcccagtgtggaggctgcagtgacagaggcaacatcagta accccaaaatcatctccacgcactcctgcaaactcagagtccctaggaagagaaaaaccc acaaaggattcactgaggcgaggttcccagtttcagtgtgacactcctgcaatgactgat attgtcctgcttgtggatggatcctggagcatcgggcgcaacaatttcaagctcattaag gagtttctgagcaatttggtttccccattcaatattgcccgagacaagataagagtaggg ctgtcccagtacagcagcgacccccgcaccgagtgggatctgagcgcccactccacgagg gaacagctgctggaggccatcaggaacttgcggtacaagggcggcaacaccttcacaggt ctagcactgacccacgccctggagcagaacctgaaaccagacgctggtgcccggctggag gctgagaagctggtgatactgctgactgatggaaaatcccaggatgatgccaacctggct gctcagaccttgaagaacctgggcatagagatatttgccattggggtgaagaacgcagat gaggcagagctgaagcaagtggcctcggagccgctggagctcaccgtgtacaacgtgctg gacttcccactgctgagctccctggttggcaaactcacccgggtcctgtgcaccagaatc aaagagaagagcaacaaggaaaccacaggcagcactgtgaaagatttccctgtgaataca ggtccccagctgagcccaactgacctgaaaatatcagctgtgacctccaagagcatgaat ttgacttggagtcctcctctgagaccaccaaagaaataccgggttgtgtattatccatcc aagggtggtacccctagagaggtggttctggatggagcagtctcctctctgcggctttcc aacctgacctcgcacacggagtacctggtgtcggtgctcccggtgtacgacactgcagtt ggggacgggctgaggggcgtcacctccacattgcctttgtctccccctcgctccctgcgc gtctctgagctgagccacaacagcatcaggctgagctggaaagcagcccagggagccaca cactacctggtgctctgctctgcagcccctgatggagcagaggactacacagcagaggtg aaggtgacccagcccgaggtcctgctggatgggctgtctcccagcactgagtattccatc gcggtttacgcgatgtacggggaagatgcgagcgatcccaccagcatccaggaaaccacc ctggccttgagtccccccagattcctgagcttctccgagctcagccacgcgtccgttcga gtcagctgggaggccgtgtctgctgctgtgagagctcaccacgtcacctacgtttctagc agagggggcaacactggggaggtggaagttccaggcactgcaacatccactgtcctgaga cctctgtcctccctcacccaatacttcatcagtgtcagatctacatatgatgaaggggac tcctttccaattactggcaatgttaccaccttgaaggtccccccgccgcgcgctctgaag gtggctgagctctccgggaacagcctccgactgcagtgggaagctgtggctgcctctgat gtggttgtctatcagatcaagtggagcacagccagtggagagaagcctcaggagctctcc atcgctggaaatgtggcaacagctgtcctgccaggcttgcagaagaacactgactacaaa atatccatctgggcctattacaaagatggtgctcgaagtgacacagtttctgttcatcac aggaccaattcccggagcccacccaccaacctcttcatcgactccgagacccccaccagc cttcaggtccactggaccccccccgacggccgtgtacagcactacaaaatcacctacagc cccgtgtctgatgctggtgcccagcagacgatcatggcttctggcaaaagcagcagcgtg accctgcagcctctgctgcctgacagagcctacaaagtgaccatttctgccatccactac acgggagagagcgagagcacatccacaacgggacggacagctccagtgctgtctaaattc ccttcaatccgaggattcgttccacctaaaccagaggcctgccccaccatctcctctgcc gagggctccgtacgagggtttgacatgatggaagtttttggcttagtagagaaggaatac tcctccattaaaggcgtggccatggagcccttcgtgttcagcagttcccgtaccttcacc ctgttcagagacattcagctcacccagaggaccagtgacatccacctctttgccatccca cccgagcacaccatcagcatcctcctgcgcctcctgcccgacacccccaaggagcccttt gccgtgtggcagataacggacgaggacttccagcctctcctgggggttaaccttgacccc agtaagaaatccttgacctatttcaatcatgactacaaggctgatttacaggaagtctcc tttgaccagcaggaagtgaagaagatattctatgggagctttcataaggtgcacgtggcc gtgagccacttcaagatcaaactctacctggactgtaagaaaatagcggagaaacccatc agcaccgtcggcagcatctccaccgctggcttcaccatgctgggaaaagtgaccaggacc agagggccccggagcggatctgcaccgttccagctgcagtctttgaagatcttgtgcagc agcacaggggcggaagaagacagatgctgtgatctccctgcactgagggatgaggagacc tgccccaccttggctcctgcctgcacttgtacttcgggccgcccaggcttgccaggacct ccagggccccctggcagccctgggaggagaggacctcagggggagcagggggaaccagga cccaagggtgaaccaggcccacctggacaagtaggaccagcaggtcccagtggccagcaa ggctctccaggttcccagggaatcacagttcagggtcctgtgggaccaccaggaattaaa ggagagaaaggagacactggaagtcctggtatgcagggcattcctggtgtgcagggagct ccaggcagggatggacttcaaggtgcaaagggggtgaggggactagaaggcacagcgggg cctccaggacctcctggaccaaggggtttccaaggagcgacaggcacccgaggcagcagt ggcgagaagggacctcctggtgatgttgggccaacagggctgccaggtccaaaaggagaa agaggagagaaaggggaaccacagtccttggccacaatttaccagcttgttagccaggct tgtgagcggatgattcagactcatgtgttgaaatttgactcattcattcatgaacatgca aggaagccagttcccatgtgggaagaaaggctaaaaccaggagaaccaggaccaccaggt cctccaggcccccctgggagcaatggagagagaggagaaaacggcatccctggacgacca ggcaaagatgggtatccaggagagagaggagccccaggacccaaaggagaaaaaggaatg tctggagccagtgaggaggggagccaaggccccagaggcagaacaggcccaccaggagaa gttgtgctggggaaaccaggcccgaagggttaccctgggaatgctggtcctcaaggtttt cctggtgccagaggacagcctgggcagcctggacatccaggagactgtgatatctctgga tgttatggggcaggtagaagagatttcgtcccctga

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