Empidonax traillii (willow flycatcher): 114059013 Help Entry 114059013         CDS       T05887                                  Symbol SYNPO2 Name (RefSeq) synaptopodin-2 isoform X1   KO K24066   synaptopodin-2 Organism etl  Empidonax traillii (willow flycatcher) Pathway etl04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:etl00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     114059013 (SYNPO2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:etl04990]     114059013 (SYNPO2) Domain-containing proteins not elsewhere classified [BR:etl04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    114059013 (SYNPO2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PDZ PDZ_6 Calsarcin PDZ_2 Motif Other DBs NCBI-GeneID:  114059013 NCBI-ProteinID:  XP_027742777 LinkDB All DBs Position Unknown AA seq 1275 aa AA seqDB search MLPDCTGNMGTGDYLCIAMSGGAPWGFRLQGGKEQKQPLQIAKVRSKSKAAKAGLCEGDE VVSINGKPCGDLTYAEVIVLMESLTDVLQMLIKRPSSGINETLSAERANGKPENVKNEDY RENTTLQINRATEIPRGDLCITEIYSGTHQGAAESNVNFSETKQDTTQSPKITPKVIGAS KVLVADEAALRGKTEERRPGTVVELQLSLSNDTNKGTSAPAVTLLGAEKGPPSARGASGQ QDGTSPLIAIPLAGKEGHVQWSNKVVQFSSSKEVKRIQGAVPSIPRVEVILDCSDREQEA PRSLSDRGCVDSQAEGGQSEAPPSLLSFAISPEGTEQGEDNKPSEKEHRPLKHRARHARL RRSESLSEKQVKEAKSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTLVSYGTGELE RDEDEGEEGEGEEGDKENTFEVSLLATSESEIDEDFFSDIDKDGKIVTFDWDSGLLEVEK KTKSGEEMQTLADSTGKGALMFAKRRQRMDQITAEQEEMKASTVQTEEHRESTVTENFQK VSSSVYQSKEEETSRQQTCMSKSYTDVSQNHSKTVQQNGFGLAPGTNLPFQSSGAPKAPS LNITAKPFPSGVQNRAAAPFSPVRNVTSPLSDAAAPPPYCSVSPPAEAFYRPVSAPVASK AAPSLWAPPEPTEHIASRDERIAVPAKRTGILQEAKRRSTSKPMFNFKDAPKVSPNPALL SLVHNSEGKKGAGAGFESGPEEDYLSLGAEACNFMQTQASKQKAPPPVAPKPSLKVSPSA GAPVSPVWSPSAAASNKAPSFPAPASPQAAYPAPPKSPQYPHSPTHPPSTLNLAGPFKGP QASLASPSCAPKSTPVTPGAGETKPPFEMPPAMSGKGAQLFARRHSRMEKYVVDSETVQA NMARASSPTPSLPASWKYSSNVRAPPPVAYNPIHCPSYPPAASKASSKSAAATKNTKRKP KKGLNALDIMKHQPYQLDPSLFTFQPPKESLAMKQTSKLSPSKQALPLPPFLPPGAGSPT RARPSSVYSVPAYGSQPPFQSNASLPVNESYSPTGYSAFSKPETTTPSLFTAPRPKFSAK KAGVTAQGRSSGRSLSLPGRPSSFIPRAPSPTSPLIFQPAPDYFSKPDAAADKPGKRLTP WEAAARSPLGLVDEAFGPQNMQESIAANVVSAARRKTLPEPPEEWKQKVSYEPPATGGSA ALLGGKQSGVVPPQKSSLSAPSAPSQAGSQLQYPYCSQRSRTDPDIMSVDSRSDYCLSTA DSNYNPQPRGWRRPT NT seq 3828 nt NT seq  +upstreamnt  +downstreamnt atgctgcctgactgcaccgggaacatgggcacgggggattatctctgcattgctatgagc ggaggggcgccttggggctttagactgcaaggtggcaaggagcaaaagcagcctttgcag atcgccaaggtccgcagcaaaagcaaagcagccaaggccgggctgtgtgagggggatgag gtggtgtccatcaacggcaagccctgtggagacctgacctatgctgaggtcatcgttctc atggaaagcctgactgacgtcctgcagatgcttatcaagagaccctccagtggaatcaat gaaaccttgagtgctgaaagagcaaatggaaagcccgagaacgtgaaaaacgaggactac agggagaacaccacactgcaaattaacagagcgacagagataccccgtggagatttatgc atcacagagatatacagtggcactcaccagggagcagcagaaagcaacgtaaacttttct gagacaaaacaagacaccacacaaagccccaaaatcactcctaaagtgataggcgcctcc aaagtgctcgtggcagacgaggctgctctcagagggaagacagaagaaagaaggccaggt actgtggtggagctgcagctgtccctctccaatgacacaaacaagggcaccagtgctcct gctgtgactctcctgggggcagagaaaggccccccttcagcacgaggagccagtggacaa caggacgggaccagccccctcattgcaatccccctggccgggaaagaggggcacgtccag tggtcaaacaaagtagtccagttttccagcagcaaagaggtcaagaggatccaaggtgca gttccatctatccccagggtggaggtgatcctagactgttcagacagggagcaggaagcg cccaggtctctgtctgacagggggtgtgttgattctcaagcagaaggagggcagtcagaa gcacctccttccctcctctcctttgcaatctcaccagaaggcacagagcagggagaagac aacaagccctcggaaaaggaacacagacctctcaagcacagggcaaggcacgcaaggctc cgacgaagtgagagcctgtcggagaagcaggtcaaggaagccaaatctaaatgtaaaagc attgcactgctgctgacagcagctcccaaccccaactccaagggggtgttgatgttcaag aagcgccgccaaagggcgaggaaatacactttagtgagctacggcacgggggagttagaa cgggacgaagacgagggcgaggagggcgaaggtgaagagggggacaaagaaaacaccttc gaagtgagtttgcttgccaccagcgagtcagaaatagatgaagatttcttctctgacatt gacaaggacggtaagatcgtgacctttgactgggacagtggtctactggaggttgagaag aagacaaagagcggagaggagatgcagacgctcgcagacagcacagggaaaggggccctc atgtttgccaagagacggcagaggatggatcagattacagcggagcaagaggagatgaag gccagcacggtgcagacagaggagcacagggaaagcacggtgacagagaacttccagaaa gtaagctcttcggtctatcaatcaaaggaggaggaaacatcaagacagcagacctgcatg agcaaaagctacacagacgtgagccagaaccacagcaaaacggtgcaacagaacggcttt ggcttagcaccaggcacaaacctcccttttcagtcctctggagcccccaaagcaccatct ttgaatataacagctaaacccttcccttccggggttcaaaacagagcagctgcaccgttt tcacctgtccgaaatgtcactagtcctctttcagatgcagcagcaccgcctccctactgc tctgtcagcccaccggccgaggctttctacagacctgtctcagctcctgtggccagcaag gctgccccaagtctgtgggcgcccccggagcccacggaacacatagcgtccagggacgag aggattgccgtgccagccaaaagaactggcatactgcaggaggccaagagaagaagcact tcaaaacccatgttcaacttcaaagatgcacccaaagtaagtcctaatcccgccctgttg tccctcgtacacaactcggagggcaaaaagggtgctggagctggttttgagtcaggaccc gaagaagactacctcagtttgggagcagaagcttgcaatttcatgcagactcaagcatct aaacaaaaggcccctcctcccgttgctccaaaaccttcactcaaggtctctccttccgcc ggtgctccagtttcaccggtttggtcaccttcggctgcggcttctaacaaggctccctct ttcccagcaccagcctcacctcaggcagcgtatcctgcaccaccgaaatctccgcagtac cctcattctcccacccatcccccaagtactctcaacttagccggtcctttcaaagggccc caggcgagcctggcaagtcccagctgtgccccgaagtcaacgccagtcacaccaggcgcc ggggaaacgaagcccccctttgagatgccaccggccatgagcgggaaaggagcacagctg tttgccaggaggcactcccggatggagaagtacgtggtggattcagagactgtgcaggca aacatggcacgagcctcatctccaactccgtctttgccagcttcctggaaatactcatcc aacgtccgagcacctccacctgttgcttacaatcccatccactgcccgtcttaccctcct gctgcttccaaggcttcctctaagtctgctgctgccaccaaaaacacgaaaagaaaacct aagaaaggtctcaatgctttggatattatgaaacatcaaccttatcagctcgatccgtct ttatttactttccagcctcctaaggaaagccttgccatgaagcagacatcgaagctgtcc ccttccaagcaagctctacctttgcctcccttcctcccacccggtgctggctctcccacc agggcccggccatcttcagtgtactctgtgccagcctacggttcccagcctccgttccag tccaatgcctctctcccagtcaatgaatcctattcacctacaggctactccgcattttct aagccagaaaccaccaccccctctttgtttaccgctccgaggccaaaattttcagccaag aaagctggagtcaccgcacagggaagaagcagcggccgctcgttatcacttcctgggaga ccttcttcattcatccctcgagccccgtctcctacttctcctcttatattccagcccgcc cccgattacttcagcaagccagacgcagcagctgacaagcctggcaaaagactgactccc tgggaagcggcagcacgatctcccctcggcctggtggatgaagctttcggcccccaaaac atgcaggaatccatcgctgctaacgtggtatcggccgcccgcaggaaaacgcttcccgag ccaccagaggaatggaaacaaaaggtttcttacgagcctccggccacaggtggtagcgca gccttgctgggggggaagcaatcgggtgtcgtgccaccccaaaaaagctccctgtctgcc ccctctgccccctcccaggctggctcccagctgcagtatccttactgcagccagcgctcc cgaacagatcccgacataatgtccgtggattccaggtctgactattgcctgtcaacagct gattcaaactacaacccacagccaaggggatggagacgtccaacatga

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