Empidonax traillii (willow flycatcher): 114061929
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Entry
114061929 CDS
T05887
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04510
Focal adhesion
etl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114061929 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114061929 (LAMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
GCIP_N
Motif
Other DBs
NCBI-GeneID:
114061929
NCBI-ProteinID:
XP_027748685
LinkDB
All DBs
Position
Unknown
AA seq
1604 aa
AA seq
DB search
MGGGGGGGGERRALWLWVLWLWVPARCGGAMDECTEERSGRAQRCMPEFVNAAFNATVLA
THTCGAPAEEYCVQTGVTGVTQSCHLCDAAQPHLSHGAAFLTDYNSPADATWWQSRTMLA
GVQHPTAVNLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCEST
YRKVNRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVT
ATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNELGKLVC
NCKHNTFGVDCEKCLPFFNDRPWRRATAESANECLPCDCSGRSQECYFDPELYRSTGHGG
HCTGCADNTAGPHCERCRDGFYRLGSDEGCQPCSCNPVGSLSTQCDSYGQCSCKPGVMGD
KCDRCQPGFHSLSEAGCRPCSCNPAGSTGECNVETGRCACRDNVEGFHCERCKPGFFHLD
SSNPRGCTPCFCFGHSSVCTSAVGYSIYSITSDFQFGEDEWRAEQRDGSEVLLRWSAESR
DVSVISDTYFPMYFVAPGKFLGNQVLSYGQNLSFSFRVDKRDTRLSAEDLVLEGAGLRVS
VPLIAQGNSYPSESAQTYTFRLHEATDYPWRPALTAFEFQKLLHNLTSIKIRGTYSERSA
GHLDDVTITSARPGPGVPVAWVESCSCPVGYEGQFCERCTSGYRRETPSLGPYSPCVPCA
CNGHSETCDPETGTCNCRDNTAGSHCEKCRDGYYGDATAGTASDCRPCPCPGGSSCAIVP
RTKEVVCTSCQAGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCNDNIDPNAVGNCDRQ
TGECLKCIHNTAGFYCDRCKDGFFGNPLAPDPADKCRACHCNPYGTVNQQTSCNQVTGQC
ECLSHVTGRDCSACEPGFFNLQSGRGCERCNCHALGSTNGQCDIHTGQCECQPGVAGQHC
DRCEGNHFGFGSEGCKPCDCDPEGSRSLQCRGNGRCECKEGFVGTRCDQCEENYFYNRSW
PGCQECPACYRLVKDKVAEQRERLRELENLIANLGTGEEAVTDQAFEERLKQAEREVTEL
LHEAQRSKDVDQGLMDRLKDINSTLANQLNRLRNIQGTVRETENLAEQARVRVEDTEDLI
SMASDMLEKAKVAADNVSIAPPEQSGDPNNMTLLAEEARKLAERHKKEADEIVRVAKAAN
DTSTEAYQLLLKTLAGENQTAIDIDELNQKYNQARNISRDLEKQANKVLAEAEEAGNRAL
QIYANLTSLPTVDSMGLENEASKIKKEAEELDQLIARKLKDYEDLREDMKGKELEVKNLL
EKGKTEQQTADQLLARADAAKALAEEAARKGNGTLQEANTILSNLKDFDKRVNDNKTAAE
EALKRIPAITQTIAEANNKTRQAELALGNAAADAREAKARADDAEKIASSVQKSAAATKA
EADKTFADVTGLAREVDDMMKQLQDAEKELKRKQADAEQDMMMAGMASQAAQEAEDNARK
AKNSVNSLLTVINDLLDQLGQLETVDLNKLNEIEGTLNSAKDQMKDSDLDQKVSFLEREA
KKQDDAIQAYNRDIEEILKDISNLEDIRKTLPSGCFNTPSIEKP
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atgggagggggcggcggtggcggcggcgagcgccgggcgctgtggctgtgggtgctgtgg
ctgtgggtgcccgcgcggtgcggcggcgccatggacgagtgcacggaggagcggagcggg
cgggcgcagcgctgcatgcccgagttcgtgaacgcggcgttcaacgccacggtgctggcc
acgcacacgtgcggggcgccggccgaggagtactgcgtgcagaccggggtcaccggcgtc
acccagtcctgccacctctgcgacgccgcccagccgcacctgagccacggggccgccttc
ctcaccgactacaacagcccggccgacgcgacctggtggcagagccgcaccatgctggcc
ggcgtgcagcaccccaccgccgtcaacctcaccctgcacctggggaaggccttcgacatc
acgtacgtgcgcctcaagttccacacgagccggcccgagagctttgccatctacaagcgc
acgcgggaggacggcccctgggtaccctaccagtactacagcggctcctgcgagagcacc
taccgcaaggtcaaccgcggcttcatccgcaccggcgaggacgagcagcaggcgctctgc
accgacgagttcagcgacatctcccccctcaccgggggcaacgtggccttctcgacgctg
gaggggcgtcccagtgcctacaacttcgacaacagccctgtgctgcaggaatgggtgacg
gctacagatattagagtgaccctcaaccgtctgaacacatttggagatgaagttttcaat
gacccaaaagttctcaagtcttactactatgcaatttctgactttgctgtgggtggtagg
tgcaaatgcaacgggcacgccagcgagtgtgtgaagaacgagctggggaagctggtctgc
aactgcaagcacaacacctttggggtggactgtgagaagtgccttcccttcttcaacgac
cgtccctggaggagagcgacagcagagagtgccaacgagtgcctgccttgtgactgcagc
gggagatcccaggagtgctacttcgaccccgagctgtaccgctccacgggccacggcggc
cactgcacgggctgcgccgacaacacggccggcccgcactgcgagcgctgcagggacggc
ttctaccgcctgggcagcgacgagggctgccagccctgcagctgcaaccccgtgggctcc
ctcagcacacagtgtgacagctacggccagtgcagctgcaagcccggcgtgatgggggac
aagtgtgaccgctgccagccgggcttccactccctctccgaagctgggtgcaggccctgc
tcctgcaatccagctggcagcacaggggaatgcaacgtggagacggggcgctgtgcgtgc
agggacaacgtggaaggcttccactgcgagaggtgcaaacctggatttttccatctggat
tcctccaacccgaggggctgtaccccctgcttctgtttcggacactcttcagtctgcacc
agtgctgtgggctacagcatctacagcatcacctccgacttccagttcggagaggacgag
tggcgtgctgagcagcgcgatggctcggaagtgttgctgcggtggagcgcggagagccgg
gatgtctcggtgatctcggacacctacttccccatgtatttcgttgctccaggcaagttc
ttgggcaaccaggttttgagttacgggcagaacctgagcttctcgttccgcgtggacaaa
cgggacacgcggctctccgcagaggacctggtgctggaaggggccgggctgagagtgtcg
gtgccgctcatcgcccagggcaactcttaccccagtgagagtgcccagacctacaccttc
aggctccacgaggctacagattacccatggaggcccgctcttacagcgtttgagttccag
aagcttctccacaacttgacttccatcaagatccgcgggacgtacagcgagagaagtgcc
ggccacctggatgacgtcaccatcacgagcgctcgtcccggacccggcgtgcccgtggca
tgggtggagagctgctcctgccccgtggggtacgaggggcagttttgtgagcgctgcacc
tccggctaccggcgagagaccccgagcctggggccctacagcccctgcgtgccctgcgcg
tgcaacgggcacagcgagacctgcgatcccgagacgggcacgtgcaactgcagggataac
acggcgggctctcactgtgagaagtgcagggacggctattacggtgacgcgacggccggc
acagcctcggactgccggccctgcccctgcccgggcggctccagctgtgccatcgtgccc
cgcaccaaggaggttgtgtgcaccagctgccaggctggcactacaggcaagaggtgcgag
ctgtgtgacgacgcctatttcggggacccgctgggcgaaaacggcgccgtgaggccctgc
cgcctgtgccagtgcaacgacaacatcgatcccaacgccgtgggcaactgcgaccgtcag
accggagagtgcctcaagtgcatccacaacaccgctggcttctactgcgaccgctgcaag
gacggcttctttggcaaccccctggcccccgaccccgccgacaagtgcagagcttgtcac
tgcaatccctacggcacggtgaatcagcagacgagctgcaatcaagtgactgggcagtgc
gagtgcctgtcccacgtcaccggcagggactgcagtgcctgtgagcccggattcttcaac
ctgcagagcgggcgtggctgtgagaggtgcaactgccatgcgctgggctccaccaacggg
cagtgcgacatccacaccgggcagtgcgagtgccagccgggcgtggccggccagcactgc
gaccgctgcgagggcaaccacttcggcttcggctccgagggctgcaaaccctgtgactgc
gatcccgagggctcgcgctcgctgcagtgccgggggaacggccgctgcgagtgcaaagaa
ggcttcgtggggacccgctgcgaccagtgcgaggagaactatttctacaaccgctcatgg
ccgggctgccaggagtgtccagcctgttacagattagtgaaggacaaggtggcggagcag
cgcgaaaggctgcgggaactggaaaacctcatagccaacctggggacaggagaagaagct
gtgaccgatcaggccttcgaggagaggctgaagcaggcagagagagaagttacggagctg
ctccacgaagcgcagaggagcaaagacgtggatcagggcctcatggatcgcctcaaagac
atcaacagcacactggcaaaccagctgaacaggctgaggaacatccagggcacggtgcgg
gagacggagaacctggcggagcaggcgcgggtgcgggtggaggacaccgaggacctcatc
agcatggcttctgacatgctggagaaggcaaaggtggcagctgacaacgtgtccattgca
cctccggagcaaagcggggatcccaacaacatgactctgctggcagaagaggcccgcaag
ctggcagaaagacacaaaaaggaagctgatgagattgttcgtgtagccaaggctgcaaat
gatacttccacggaagcgtatcagctgctgctgaagaccctggctggagaaaaccagact
gccattgacattgatgagctcaaccagaagtataatcaagcaaggaatatttctcgagac
ctagagaaacaggccaacaaggtgcttgctgaagcagaggaagctggaaacagggccctg
cagatctatgccaatctcaccagcctgcctacagtggattccatggggctagagaacgag
gcaagcaagatcaagaaggaagcggaggaattggatcagctaattgccaggaagctgaag
gactatgaggatttgagagaagacatgaaaggaaaggagcttgaagtaaagaacctcttg
gagaaagggaagacggagcagcagactgcagaccagctcttggctcgagcagatgcggcg
aaagccctggctgaagaagctgctcggaagggcaatggcacactgcaggaggccaacacc
atcctcagcaacctgaaagacttcgacaagcgggtgaacgataacaagacggcggccgag
gaggctctgaagaggatccctgccatcacccagaccatcgccgaggccaacaacaagacg
cgccaggcggagctggccctgggcaacgccgctgctgacgcccgggaggccaaggcgaga
gccgacgacgccgagaaaatcgccagctccgttcagaagagcgctgctgccaccaaagcc
gaggctgacaagacttttgccgacgtgacggggctggccagggaggtggatgacatgatg
aagcagctgcaggatgcagagaaggaactgaagcggaagcaggcggatgctgagcaggat
atgatgatggcaggcatggcctcacaggctgcccaggaggcagaagataacgccaggaaa
gcgaagaactctgtgaacagcctactcactgtcatcaatgacctgctggatcagttaggg
caactggagacggtggacttgaacaaactgaacgagatcgagggtaccctgaacagtgcc
aaagaccagatgaaagacagcgacttggaccagaaagtgtctttcctcgagagagaagcc
aagaagcaggacgatgcaatacaggcctacaacagggacattgaagagatcctgaaggac
attagcaacctggaagacatcaggaagaccttgccatccggctgtttcaacaccccgtcc
attgagaaaccctaa
DBGET
integrated database retrieval system