Empidonax traillii (willow flycatcher): 114065508
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Entry
114065508 CDS
T05887
Symbol
SYNCRIP
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein Q isoform X1
KO
K13160
heterogeneous nuclear ribonucleoprotein Q
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etl03041
]
114065508 (SYNCRIP)
Spliceosome [BR:
etl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
114065508 (SYNCRIP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
hnRNP_Q_AcD
RRM_7
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
114065508
NCBI-ProteinID:
XP_027755282
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MATEHVNGNGTEEPMDTSAAVTHSEHFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
AIEALKEFNEEGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
EAKIKALLERTGYTLDVTTGQRKYGGPPPESVYSGQQPSVGTEIFVGKIPRDLFEDELVP
LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
ANNRLFVGSIPKSKTKEQIVEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
QARRRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYAQRGGPGSARGVRGARG
GAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGKRG
RGRS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggctactgaacatgttaatgggaatggtactgaagagcccatggatacttctgctgca
gttacccattctgagcatttccagacattgcttgatgctggtttaccacagaaagttgct
gaaaaactagatgaaatttacgttgcagggctagttgcacatagtgatctagatgaaaga
gctattgaagctttaaaggaattcaatgaagaaggtgcactggcagtgcttcaacagttt
aaagacagtgatctctcacatgttcagaacaaaagtgcctttttatgtggagtcatgaag
acatacaggcagagggaaaaacaggggaccaaggtggcagattccagcaaaggaccagat
gaagcaaaaattaaggcactgttggagagaaccggctacacccttgatgtgactactgga
cagagaaagtatggtggacctcctccagagtctgtatattccggacaacaaccttctgtt
ggtacagagatatttgtgggcaagattccgagagacttgtttgaagatgaacttgttcca
ttattcgagaaagctgggcctatatgggatctccgcttaatgatggatccactaactggt
ctaaatagaggatacgcttttgttactttttgtactaaagaggcagctcaggaagctgtt
aaactgtacaacaaccatgaaattcgttctggaaaacacattggtgtatgcatctccgtt
gccaataataggctttttgttggctctattcctaagagtaaaaccaaggagcaaattgtt
gaagaattcagcaaagtaacagagggtcttacagatgtcatattgtatcatcagcctgat
gacaagaaaaagaaccggggtttctgtttccttgaatatgaagatcacaaaactgctgct
caggccagacgtaggttaatgagtggcaaagtgaaagtctggggaaatgttgttacagtg
gaatgggctgaccctatagaagacccagatcctgaagtcatggcaaaggtaaaagttttg
tttgtacgcaatcttgccaacactgtaacagaggagatactagaaaaggccttcagtcaa
tttggaaagctagagcgagtgaagaagctaaaagactatgctttcattcattttgatgaa
cgggatggtgctgtaaaggcaatggaagaaatgaatggcaaagatttagagggagaaaac
attgaaattgtttttgctaagccaccagatcaaaaaaggaaagaacggaaagctcagaga
caagcggctaaaaatcagatgtatgatgattactactattatggtccacctcatatgccc
cctccaacaagaggtcgaggccgaggaggtagaggtggttacggatatccccctgactat
tatggatatgaagattattatgattattatggctatgactaccataactatcgtggtgga
tatgaagatccttactatggttatgaagattttcaagttggagctagaggaaggggtggt
agaggagcaaggggtgctgctccatccagaggtcgcggggctgctcctccccgtggcaga
gccggttatgcacagagaggtggtcctggatcagcaagaggcgttcgtggtgcgagagga
ggtgcccagcaacaaagaggccgcggggtacgtggtgcgaggggtggccgcggtggaaat
gtaggaggaaagcgcaaagctgatgggtacaaccagccagattccaagcggcgccagacc
aataatcagaactggggctcccaacccattgctcagcaaccgctccaagggaaaaggggt
cgaggccggtcctga
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