Empidonax traillii (willow flycatcher): 114070907
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Entry
114070907 CDS
T05887
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03013
Nucleocytoplasmic transport
etl05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114070907 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
114070907 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114070907 (NUP98)
03036 Chromosome and associated proteins [BR:
etl03036
]
114070907 (NUP98)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114070907 (NUP98)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
114070907 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
114070907
NCBI-ProteinID:
XP_027764332
LinkDB
All DBs
Position
Unknown
AA seq
1557 aa
AA seq
DB search
MFNKSFGAPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSNNNTGGLFGSTQTKPGL
FGSTTFSQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGGLFSSQNNAFAQNKPAGFGNFG
TSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPNGTDTMVKSGVSTN
ISTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGAATGLFGSSTATSSTATGL
FGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQPSQTTSLFNKPFGQATTTQNTGF
SFGGTSTLGQPNTSTMGLFGVTQPSQPGGLFGTAANTNAGTGFGTGTGLFGQANTGFGVG
GSTLFGNKPAGFGTTTTSAPSFGTTTGGGLFGFGANTAGNSLFGNKPATGTLGTGLGTGF
GTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAAQ
QAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQSSGSAKSKLFDGLDDDEPSLSNGAFMPKKSIKKLVLKNLNSSSLFSPVSRE
NEDLASPSEYPENGDRFFLSVPPEENHRPDGEREEEETHEVTRFYTNPIAKPVPQTLESG
GHKAQPGVDDTIVALNMRAALRNGLEGSSEDASFQEDSLQDERDEEPEAPHHLHPAGIVL
TRAGYYTIPSMEELGKFTNDRNECIVTDFTIGRRGYGSIYFEGEVNLTNLNLDEIVHIRR
KEVIVYPDDERKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEMNYEGRLEAVS
RKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEDDHPSKVDTKKLKTTPVPPPGHLP
PQQMALNGKPTPLAQPLELEQLGRVVELDSDMADITQEQPLEQPQEPFGEDSLAEEQEAV
PASTHIASTHGVNPYVLQIMKASLLADDDDLDLILDYPGKQPVKVDTSQEICSPRLPISK
SQGQKRHSAAGLLQSRFASVLFQAPSAAVPDAKGRRTLGSPPPGALWSASPLAPVFSVPP
AVPEVQVKTVGVRRQRGLVPLERSITYGKGKLLMDMGLFMGRSFRVGWGPNWTLVNCGDQ
LSGSSETEDVQCEPVEYGFLPTPVAPKPLTESPFKVHVEKLSLEQRKMDRDKELYLTPLE
IKLKHSTVHMDEPCPLLVPNPGVSAIHEYADWARKASEDPAVAESVVKHWCLAWTLCEAV
WGRLQELEARLEEPSEYVLALERRRAFSRWLAQTAAARIDHEVALARHGSHVEAVFSCLT
GKRIGEACRLAQQAGDHRLALLLSQLAGSQPVRDLLTMQLVDWHRLHSDRFIQEERLRIF
ALLTGKPVWQLSERISINVCSLLDWKRCVAVHLWYLLPPTASISRALAMYESAFQNTSEC
EKYACCPLPPYLEDSGCVVEEDDSAGRPLRDVCFHLLKLYSDRCYDLDQLLDPRSVTSDP
LDFRLSWHLWEVLRALNYSHLSQQSRGVLNTSFAAQLESEGLWEWAVFVMLHEPDAQ
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaatcctttggagctccgttcggaggcagcaccggctttgggacaacttca
acttttgggcagaatgccggcttcggtacgaccagcggaggggccttcgggacatcggcc
ttcggctccaacaacaacacgggaggcctttttgggagcacccagacaaagccaggcttg
ttcgggtcgacgacattcagccaaccagccacgtcctccaccagcaccggcttcggcttc
gggacatccacggggacatccaacagcctctttggaaccaccagcactggtggaggcctc
ttctcatcccagaacaatgcctttgctcagaacaaaccagctggctttgggaactttggt
acgagcaccagcagcggggggctctttgggaccaccaacaccacatccaacccttttggg
agcacatctggctccctgtttggccccaccagcttcactgctgctcccactggcacgacc
attaaattcaaccccccgaacggtaccgacaccatggtgaaatccggcgtcagcaccaac
atcagcaccaagcaccagtgcatcactgccatgaaggagtacgagagcaagtccctcgag
gaactccgtttggaagattaccaggcgaaccgcaaagggccctcgaatcctgtgggagca
ggggcagccacaggcttgtttggctcttccactgccacatccagcacagccaccggactc
tttggctcttccaccaccaacacaggcttttcctacgggcagaataaaaccgcctttgga
accagtaccacgggctttggcaccggcaccaccggggggctctttgggcagccgtcccag
accaccagcctgttcaacaaacccttcggccaggccacgaccacgcagaacaccggcttc
tccttcgggggcaccagcacgctgggccagcccaacaccagcaccatgggtctctttggg
gtcacccagccctcgcagcccggaggcctttttgggacagctgccaatacaaatgctggg
actggatttggaacgggaactggcctttttggacaagccaacacaggatttggtgttggt
ggttcgaccctgtttgggaacaagcctgctggatttggaaccaccacgaccagcgcgccg
tcgttcgggaccaccacgggcggtgggctcttcggttttggtgctaacactgctggaaat
agtttgtttggaaataagcctgcaactgggactctgggaacgggacttggaacagggttt
ggaacagctctgggggcaggacagacgtccttgtttggaaacacccagcccaagctgggg
ggaacgctgggaacaggagcctttggagcaccgggattcaacacctccacagccactctg
ggctttggggcccctcagcctgctgtagccctgacagaccccaacgcctcggcggcacag
caggcagtcctgcagcagcacctcaacagcctcacctactccccctttggggactccccg
ctcttcagaaaccccatgtccgacccaaagaagaaggaggagaggctgaaaccaaccaac
ccagcagcccagaaagccctgacaacacccacccactacaagctgaccccccggcctgcg
accagagtgcgacccaaggccctgcagtcctcaggatccgccaagtccaagctcttcgac
gggctggacgacgacgagccctccctgtccaacggggccttcatgccaaagaagagcatc
aagaagctggttctgaagaacctcaacagcagcagcctgttctctcccgtgagccgtgag
aacgaggacctggcgtccccgtccgagtacccggagaatggggacagattcttcctgtcg
gtgcctcccgaggagaaccaccggccggacggggagcgcgaggaggaggagacgcacgag
gtgacgaggttctacacgaaccccatcgccaagcccgtcccgcagaccctggagagcggc
gggcacaaggcgcagcccggcgtggacgacaccatcgtggcgctgaacatgcgggcggcg
ctgcgcaacgggctggagggcagcagcgaggacgcctccttccaggaggattccctgcag
gacgagcgcgacgaggagcccgaggctccgcaccacctgcaccccgcagggattgttctg
acacgagctggctactacaccatcccctccatggaggagctgggcaagttcaccaacgac
aggaacgaatgtatcgtgacagacttcaccataggccgcagaggttatggatcgatttac
tttgaaggagaagtaaacctaacaaacctaaacctggatgagatcgttcatatccggaga
aaagaagtcatcgtttaccccgacgacgagagaaaaccgcccattggggaaggtttaaat
aggcgggccgaggtgaccctggacggggtgtggcccacggacaagacgtcgcggtgcctg
atcaagagcccggagcggctggcggagatgaactacgagggccggctggaggccgtgtcc
cgcaagcagggcgcgcgcttcaaggagtaccgccccgagaccggctcctgggtgttcaag
gtagcacacttttccaagtatggcttgcaagattcagatgaggaagaagatgatcatcct
tccaaagtggacaccaagaagttaaagaccacccctgtgccacccccagggcacctgccg
ccccagcagatggccctgaacggcaaaccaacacccctggctcagcccctggagctggag
cagctgggcagggtggtggagctggacagcgacatggcagacatcacccaggagcagccc
ctggagcagccccaggagccctttggggaggacagcctggccgaggagcaggaggccgtg
cccgcatccacccacatcgcatccacccacggcgtcaacccctacgtcctgcagatcatg
aaagcttccctgcttgctgatgatgacgacctagatctgatcctggattatcctgggaag
caacctgtcaaagtggacacttcccaagagatctgctctccaaggctgcccatttcaaaa
tcacaaggacagaagagacactcagctgctgggctgctgcaatccaggtttgccagcgtc
cttttccaggcgccgagtgctgctgtgccagacgccaagggccgcaggactttgggcagc
ccccctcctggagccctgtggtcggcgtccccgctggcccccgtgttctcggtgcccccg
gccgtgcccgaggtgcaggtgaagacagtgggagtgcgcaggcagcggggcctcgtccct
ctggaacgctccatcacctacggcaaggggaagctcctgatggacatggggctcttcatg
gggcgctccttccgcgtcggttggggccccaactggacgctggtcaattgtggggatcag
ttaagcgggtcgagcgaaacggaagatgtccagtgcgagcctgtggaatacggattcctg
ccgactcctgtggctcccaaaccactcacagaatcccctttcaaggtccacgtggaaaag
ctgagcttggaacaacggaagatggacagggacaaggagctgtatctcacccccctggag
ataaagctgaagcacagcactgtccatatggatgagccctgtcctctcctggtccccaac
cccggagtctctgctatccatgagtatgctgactgggccaggaaggcatctgaggatcct
gctgtggcagagagcgtggtgaagcactggtgcctggcctggacactgtgtgaggccgtg
tggggccggctgcaggagctggaggcacggctggaggagcccagtgagtacgtgctggcg
ctggagcggcgccgcgccttctcgcgctggctggcgcagaccgcggccgcgcgcatcgac
cacgaggtggccctggcccggcacggcagccacgtcgaggccgtcttcagctgcctcacg
ggcaagaggatcggggaggcctgcaggctggcacagcaggcaggtgaccaccggctggcc
ctgctgctgtcgcagctggcgggcagccagcccgtgcgggacctgctcaccatgcagctg
gtggactggcaccgcctgcactccgaccgcttcatccaggaggagcggctgcgcatcttc
gccctgctcacaggaaagccggtgtggcagctgtcagagaggatcagcatcaatgtgtgc
tcgctgctggactggaagcgctgcgtggccgtgcacctctggtacctcctgccccccact
gcctccatctccagggctctggccatgtacgagtcagccttccagaacacctcagagtgt
gaaaaatacgcctgctgccccctgcccccttacctggaggattccggctgtgtcgttgaa
gaagatgacagtgcaggaaggcccctgagagatgtctgcttccatttgttaaagctctac
agcgacaggtgctatgaccttgaccagctgctggatcccaggagcgtcacgtctgacccg
ctggatttccgcctcagctggcacctgtgggaggtgctgcgggccctgaactactcccac
ctgtcccagcagagccggggggtgctgaacaccagctttgctgcccagctggagagcgag
gggctgtgggagtgggctgtgtttgtgatgctgcacgagcctgatgcgcagtga
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integrated database retrieval system
