Erwinia tracheiphila: LU633_18550
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Entry
LU633_18550 CDS
T07827
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
etp
Erwinia tracheiphila
Pathway
etp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
etp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LU633_18550 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etp03400
]
LU633_18550 (recD)
Enzymes [BR:
etp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LU633_18550 (recD)
DNA repair and recombination proteins [BR:
etp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LU633_18550 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecD_N
AAA_19
AAA_30
UvrD_C_2
Helicase_RecD
Viral_helicase1
AAA_11
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
DEAD
nSTAND3
UvrD_C
PhoH
T2SSE
CbiA
AAA_28
FtsK_SpoIIIE
AAA
AAA_31
SRP54
DUF87
TrwB_AAD_bind
ResIII
ATPase
AAA_24
Motif
Other DBs
NCBI-ProteinID:
UIA95422
LinkDB
All DBs
Position
complement(3553765..3555612)
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AA seq
615 aa
AA seq
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MSRMVELLNIACERRVLRALDVQFARLIAGDERPALMLAAAWVSAGAGEGHVCLPLVHFT
EQQLFAGRYPELARQIWFEAGEPDWQTLLPQEEAVGDGSGPTPLVLWQQRLYLHRMWQSE
GEVAHFFAHDTPVSLQNPERLRAILDDYFGVQSDNGQKIAAAVAITRQIAVISGGPGTGK
TTTVANLLASLLELSGEKLRICLAAPTGKAAARLTESLAKALKALMVSEATRQQLLTEAT
TLHRLLGVLPGSQRMRYHAGNPLHLDLLVVDEASMVDLPMMANLIAALPSRARVIFLGDR
DQLASVEAGAVLGDICRCAEVGYSPARAQELRLLTGCDVAANDVQQAGVHDSICLLRKSF
RFGASSGIGQMAQAVNAGDSHQVDRLFAAGFTDIERFSLQTGEQYQYLLGVCLAGYQEYL
SLLRNKVQPEQAIEAFGRFRLLCALREGPFGVIGLNERIEAFLSRQRLIQRAPGIGGKWY
AGRPVMISRNDSALGLFNGDIGITMYNDEEKLKVFFPLADGTIKAVQPVRLPPHETAFAM
TVHKSQGSEFDHTLLVLPDQFTPILTRELIYTAITRARSKLTLFAEQTVFNQAVKIRTLR
RSGLIARLNLSENQQ
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggatggttgaactgttaaacatcgcctgcgaacggcgagtgctacgggcgctt
gatgtacagtttgccagactgattgcgggtgatgaacgacccgccctgatgcttgctgct
gcctgggtgagtgccggagcaggtgaaggccacgtttgcctgccgctggtgcacttcacc
gaacagcagctgttcgcgggacgctatcctgaactggcaaggcagatctggtttgaggcg
ggtgaacctgactggcaaacgctgctgcctcaggaagaggcggtcggcgatggttccggt
cccaccccgctggttctctggcaacaaaggctttatctgcaccgcatgtggcagtcagaa
ggggaagtggcacatttttttgcccatgacacgcccgttagcctgcaaaatcccgaacga
ctgcgtgcaatcctcgatgattactttggtgtgcagtcagacaacgggcagaaaatcgct
gcagcggtggctatcactcgacagattgcggtcatttcaggcggacccggcacgggtaaa
accaccaccgtggcgaacctgcttgcctcactgctggaactttccggcgaaaaactgcga
atctgccttgctgcgcctaccggcaaagcggcggcccgtctgacggaatcgctggctaaa
gcgctaaaggcgctgatggtcagtgaggcaaccaggcaacagcttttaactgaagccacg
accttacatcgcctgcttggcgtgcttcccggcagtcagcgaatgcgttatcacgccggt
aatccactgcatctggatttgctggtggtggatgaggcatctatggtggatctgccgatg
atggcgaatctgattgctgccctgccttcccgggccagggttatttttctgggtgatcgc
gatcagctggcgtcggtggaagctggggcggtacttggcgatatttgtcgctgtgcggaa
gtcggttatagccctgcacgcgcacaggaactgaggctgctgaccgggtgtgatgttgcg
gcaaacgatgtgcagcaggctggcgtgcatgacagcatttgcctgctacgcaagagcttt
aggtttggtgcatcgtccggtatcgggcaaatggcacaggcggtaaatgccggagacagt
catcaggtggaccggctgtttgccgccggattcacggatattgagcgattttcgctgcaa
actggcgagcagtaccagtatttgctgggtgtttgcctggcgggttaccaggaatatctg
tcgctgttacgaaataaggtccaaccagagcaggcgattgaagcatttggacgtttccgc
ttgctttgcgcgctacgtgaaggcccctttggcgttatcgggctgaacgagcgtatcgaa
gcttttttgtcccggcagcggcttattcagcgtgcaccgggcatcggcggaaagtggtat
gcgggacgtccggtgatgatctcccgtaatgacagtgcgctgggactgtttaacggcgat
attggcattaccatgtacaatgatgaggaaaaactgaaggtctttttccctctggcggat
ggcacaatcaaggcggtgcagccggtccgcttaccccctcacgagacggcttttgccatg
accgtgcataaatcccagggttctgaatttgatcatacgctgttggttctgcctgaccag
tttacgccgatactaacgcgagaactgatttataccgccattacccgcgcccgctcaaag
ctgacactctttgctgaacagacggtgtttaatcaggcggtcaaaatacgcacattacgc
cgaagcggtttgatagcgcgtctcaacctgtcggaaaatcagcaatag
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