Escherichia coli O17 K52 H18 UMN026 (ExPEC): ECUMN_4334
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Entry
ECUMN_4334 CDS
T00831
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
eum
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Pathway
eum00300
Lysine biosynthesis
eum00470
D-Amino acid metabolism
eum01100
Metabolic pathways
eum01110
Biosynthesis of secondary metabolites
eum01120
Microbial metabolism in diverse environments
eum01230
Biosynthesis of amino acids
Module
eum_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
eum00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ECUMN_4334 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ECUMN_4334 (dapF)
Enzymes [BR:
eum01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ECUMN_4334 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CAR15467
UniProt:
B7NFB1
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All DBs
Position
4480730..4481554
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcgaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcaccggagctgattcgtcgcctggcggatcggcacctgggggta
gggtttgaccagctgctggtggttgagccgccgtatgatcctgaactggattttcactat
cgcattttcaatgctgatggcagtgaagtggcgcagtgcggcaacggcgcgcgctgcttt
gcccgttttgtgcgtctgaaagggctgaccaataagcgcgatatccgcgtcagcaccgcc
aacgggcggatggttctgaccgtcaccgatgatgatctggttcgcgtaaacatgggcgag
cccaacttcgaaccttccgctgtgccgtttcgcgctaacaaagcggaaaagacctatatt
atgcgcgccgccgagcagacaatcttatgtggcgtggtgtcgatgggaaatccgcactgc
gtgattcaggtcgatgatgtcgatactgcggcggtagaaacgcttggtcctgttctggaa
agccatgagcgttttccggagcgcgccaatatcggttttatgcaagtggttaagcgcgag
catattcgtttacgcgtttatgagcgtggggcaggagaaacccaggcctgcggcagcggc
gcatgtgcggcggtggcggtagggatccagcaaggtttgctggccgaagaagtacgcgtg
gaactccccggcggtcgtcttgatatcgcctggaaaggtccgggtcacccgttatatatg
actggcccggcggtacatgtctacgacggatttattcatctatga
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