Eutrema salsugineum (saltwater cress): EUTSA_v10005833mg
Help
Entry
EUTSA_v10005833mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10005833mg
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10005833mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10005833mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EUTSA_v10005833mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
EUTSA_v10005833mg
mRNA cycle factors
Common to processing body (P body) and stress granule
EUTSA_v10005833mg
Spliceosome [BR:
eus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
EUTSA_v10005833mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
EUTSA_v10005833mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
18020263
NCBI-ProteinID:
XP_006402772
UniProt:
V4L1R6
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MSSSWADVSESERAPSGWGYGNSRPSRTNYVPPHLRSRTPSSDFAAPSPGNDRVGYGGAH
SGYGGRGQGYGGRGSGYAGRGGGGGGGGWNNRGWDRRDTETNPFGNDVNADPATNEQENT
VINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAA
GRDLMACAQTGSGKTAAFCFPIISGIMKEQHGERPRGVRGVYPLAVILSPTRELACQIHD
EARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVKYL
ALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLA
VGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLE
NWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDL
PNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTSMAKPLAELMQEANQEVPDWLTRYASRA
SFGGGKNRRSGGRFGGRDFRRESYGRGGGGGDYYGGGGGYGAVPGGGYGAMPGGYGTVPG
GGYGTVPGGGYAPYGRGGGAYYGGGYGTVPSQGYGPGVASAWD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatcatgggctgatgtttctgaatcggagagggcaccatctggttggggttac
gggaactctcgtccgtcgcgaaccaactacgttcctccacatcttaggagccgtacgcca
tcttcggattttgctgctccttcacctggtaatgatcgtgtgggatatggtggtgcacat
agtggttatggtggtcggggccaaggctatggtggtcgaggctcaggctatgccggtaga
ggaggaggaggtggtggtggcggttggaataacagaggttgggaccgtcgggatactgaa
accaatccgtttggtaatgatgtgaatgcagacccggctactaacgagcaggaaaacaca
gtcattaactttgaggcgtatgaagatattcccatcgagacaagtggggataatgtgcca
ccccctgttaatacatttgcagagatagaccttggagaggcgctgaatctaaatattcag
aggtgcaaatacgtgaagccgacccctgtgcagcgtaatgcaattcccatactggctgct
gggagggatttgatggcttgtgctcagacagggtctgggaagacagctgctttctgtttt
ccgattattagtgggattatgaaggagcagcatggagagagaccacgtggagtacggggg
gtctatcctcttgctgtcattctctcaccaacaagggagctggcatgccagatacacgat
gaagccagaaaattctcctatcaaactggtgtgaaagttgtggttgcttatggaggaaca
ccagtcaaccaacagattagggagcttgaaagaggagttgacattcttgttgcaactcca
ggaagattaaatgatttgcttgagagaggtagagtctcactacagatggtaaaatactta
gcacttgatgaggcggacaggatgctggacatgggttttgaaccacaaatcaggaagatc
gttcagcagatggacatgcctcctcctggtgtccggcagacaatgttgttcagtgctaca
tttcctagagagatacagagacttgcatctgattttctttcaaattacatatttctggct
gttggaagagtgggttcaagtacggatttaattgtccaaagggtagagtttgtccacgat
tctgacaaaagaagccatctaatggaccttcttcatgcccagagggagaatggtaaccaa
ggaaagcaagctttgactctagtatttgtggagaccaagaagggagctgactctttggag
aattggttgtgcatcaatggattcccagcaacgaccatccatggtgataggtcacaacag
gaaagagaagtggcactgagatcattcaagactgggcggacacctattttggttgcaacc
gacgttgctgcacgtgggcttgacataccacatgtggctcatgttgttaactttgatcta
ccaaacgacatcgatgactatgtccaccgtatcggacgaacaggacgtgcaggcaattca
ggactagcaactgctttcttcaacgacaacaacacatcaatggccaagccactcgctgag
ctaatgcaagaagctaaccaggaggtccctgactggttgactcggtacgcatctcgtgct
tcttttggaggtggtaaaaaccgacggtctggtggacggttcggtgggcgtgacttcagg
agagaatcgtatggccgaggcggtggtggtggtgactactatggtggtggtggtgggtat
ggagctgttcctggtggtggctatggagcaatgcctggtgggtatggaaccgtaccaggt
ggtggatatggaacggttcctggtggtggttatgcaccttacggtagaggcggtggtgct
tactatggtggaggatatggaaccgttcctagccaagggtatggccctggagtggctagt
gcgtgggactaa
DBGET
integrated database retrieval system
