Eutrema salsugineum (saltwater cress): EUTSA_v10006608mg
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Entry
EUTSA_v10006608mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EUTSA_v10006608mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10006608mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EUTSA_v10006608mg
Spliceosome [BR:
eus03041
]
Complex A
U2 snRNP components
U2 related factors
EUTSA_v10006608mg
Complex B
EUTSA_v10006608mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
FeoA
Motif
Other DBs
NCBI-GeneID:
18992842
NCBI-ProteinID:
XP_006416348
UniProt:
V4MSB6
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MEVDKSKLRNEDLDMEEEDDSKKHRRDRDRSKERKKEKSSEKRREKDRRKRRSERVKSSD
SEDDCDREDDEETEKRKEKERRRRDKERAKRRSERKKSSGSEDDDEEYDERDKRRAKEKE
RGHREHERDRGKDRKRDRDREREERKEKERERERREREREEREKERIKERERREREREDG
ERDRREREKERGRRNRERGRSREDGNGESDDDVKRDLKRRRKEGEERKEKEREMSVGRST
RHVDENGDSPRRKTGEEDGEKKEKKTREEELEDEQKKLDEEMEKRRRRVQEWQELKRKKE
EAESESKGDADDKEPKAGKAWTLEGESDDEECHPEEKTETEMDVDGETKPENGGDAKMVD
VENAMSTTVSEKGGDGAADEEEIDPLDAFMNAMVLPEVEKLSNSAPPVVKDGILDSEKNG
KERGDQPKKGFNKSLGRIMQGEDSDSDYSEPKDDDDPSLDEDDEEFMKRVKKTKAEKLSL
VDHSKIEYESFRKNFYIEVKDISRMTDEEVTAYRKELELKVHGKDVPRPIRSWHQTGLTS
KILDTMNKLKYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVE
AGEGPIGLVMAPTRELVQQIHSDIKKFSKALGIRCVPVYGGSGVAQQISELKRGTEIVVC
TPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPDRQTVLFSA
TFPRQVETLARKVLNKPIEIQVGGRSVVNKDIAQLVEVRPEGERFFRLLELLGEWYEKGK
ILIFVQSQEKCDSLFKDMIKRSYPCLSLHGGKDQTDRESTISDFKSNVCSLLIATSIAAR
GLDVKDLELVVNYDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELS
EQPVPDDLKAIADGFMAKVKQGIEQAHGTGYGGSGFKFNEEEEEVRKAAKKAQAKEYGFE
EDKSDSEDENDVVRKAGGGDISQQATLAVAQIAAIAAAAKANAPVSAPVTANQLLPNGGG
LAVVPGVLPVTVPGVPDGPGRAAAMVAAINLQHNLAKIQADAMPEHYEAELEINDFPQNA
RWKVTHKETLGPISDWTGAAITTRGQFYPPGRIPGPGERKLYLFIEGPTEKSVKQAKVEL
KRVLEDITTQALSLPGGAQSSRYSVL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggaggtagataaatctaagttgaggaacgaagatttggacatggaggaggaagatgat
tcgaagaagcatcggcgagatcgtgatcggagtaaggagcggaagaaggaaaagagctcg
gagaagcgccgagagaaggacagacgcaagagacggtctgagagagttaagagcagtgat
tctgaagatgattgcgatagagaagatgatgaagagacggagaagcgtaaagaaaaggaa
aggaggcggagggataaagagagggcgaagagacggtctgagaggaagaagagtagcggt
tctgaggatgacgatgaagaatacgacgagagggataaacgcagagcgaaggagaaggag
agaggacaccgagaacatgagagagataggggcaaagatcggaaaagggatagggataga
gagagggaggagagaaaggagaaagaaagagaaagggagaggagagaacgggagcgagag
gagagggagaaggagagaataaaagaaagagaaaggcgagaacgggaaagggaagatgga
gagagggataggagagaacgtgaaaaagaaaggggtaggaggaaccgggaaagggggagg
tcacgagaggatggaaatggagagagtgatgatgatgtcaagcgtgatttgaagcgtaga
agaaaagagggcgaagaacggaaggagaaagagcgtgagatgagcgttggtagatctacc
aggcatgtagatgaaaatggagatagtccaaggagaaagactggcgaggaggatggtgaa
aagaaagagaaaaaaacgcgggaagaagagctagaggatgagcagaagaagttggatgag
gagatggaaaaacggagaagaagagtccaggagtggcaagagttgaagaggaaaaaagag
gaagctgaaagtgaaagtaagggtgatgcggatgataaagagcccaaggccggtaaggct
tggactcttgaaggagaatctgatgatgaagaatgccatccggaagaaaaaacagaaaca
gagatggatgttgatggagagactaaacccgaaaatggtggagatgccaagatggtagac
gttgagaatgcgatgtctactactgtctctgagaaaggaggtgatggagctgcagatgaa
gaggaaattgatccgttagatgcttttatgaatgctatggtattacctgaggttgagaag
cttagcaatagtgctcctccagtagttaaggatggtatattggattctgagaagaatggg
aaggaacgtggtgaccagccaaagaaagggtttaacaagtcccttggtaggataatgcaa
ggtgaggactcggattctgattattcagaaccaaaggatgatgatgatccaagtttagac
gaagacgatgaggagttcatgaagagagtgaagaagacgaaggcagaaaaattgtctctt
gttgaccactcaaaaatagagtatgaatctttccggaagaacttttatattgaagtgaag
gatatttcgaggatgacagacgaagaagttaccgcttacagaaaggaattggagctgaaa
gttcacgggaaggatgtaccaagacccataagatcttggcaccagactggacttactagc
aaaattttggataccatgaataagctcaagtatgaaaagccaatgcctatccagacacaa
gcacttccaatcatcatgagcggtcgagattgtattggagttgctaaaaccggctcaggt
aaaacgctaggttttgttctgccaatgttgaggcatatcaaagaccagcctcccgttgaa
gctggtgaggggccgattgggcttgtgatggcgcctactagggagcttgttcagcagatt
cacagcgatatcaaaaagttttcaaaggcattgggtataagatgtgttcctgtgtatgga
ggatcaggagttgcgcagcaaattagtgagctaaagagagggactgagattgttgtgtgc
actcctgggaggatgattgatattctttgcacaagcagtggaaaaatcaccaatctgcgg
agggtcacatttttggtaatggatgaagctgatcgtatgtttgacatgggttttgagcct
caaattactcgaattatccaaaatattcgacctgatcgacagactgtgctcttttctgcc
actttcccgcgtcaagttgaaactttggcacgtaaagtcttgaacaagcctattgaaata
caggttggtggaaggagtgttgtaaataaggatatagctcagttagttgaagtcagaccg
gagggtgagaggttctttagacttctggaacttcttggggaatggtatgagaaaggaaaa
attctgatttttgttcagtcacaggaaaaatgtgatagcttgtttaaggatatgattaaa
aggagttacccttgcctatctcttcacgggggtaaggatcagaccgatcgtgaatcaact
atatctgattttaagagcaatgtctgcagtttgttgattgccacaagtattgcagcgagg
ggtctagatgtgaaagatctcgagttggttgtaaactatgatgctcctaaccactatgaa
gactatgtgcatcgcgttggcaggacaggaagggcagggcggaaaggctgtgctgtgaca
tttatctctgaagatgatgcaaaatatgcaccagatttagtcaaggcactggaactttct
gagcagccagtccccgatgatctgaaagcaattgctgatggtttcatggcaaaagtgaaa
cagggtattgagcaagctcatggaactggctacggaggtagtggctttaaattcaatgaa
gaggaggaagaagttaggaaagcagcgaagaaagcacaggcgaaggagtatgggtttgag
gaagacaagtctgactcagaagatgagaatgatgtggtaagaaaggcaggtggtggtgat
atttcacagcaggctactcttgctgttgctcagatagccgccattgctgctgctgctaaa
gctaatgctccagtgagtgctcctgtgactgctaaccaattgctgccaaatggtggcggg
cttgccgttgtgccaggtgtccttccggttactgttcctggcgttcctgatgggccaggc
cgtgctgcagccatggttgctgccattaacctgcagcataacctggcaaagattcaagct
gatgcaatgcctgagcactatgaagcagaactggaaattaatgatttcccacaaaacgct
cgttggaaggtgacccacaaagaaactttgggtccaatatcagattggactggagccgcc
attaccactagaggtcagttttatccaccaggacgtatcccgggacctggggaacgtaag
ctctacctgttcattgaagggcctaccgagaaatctgttaagcaggcgaaagtcgaactc
aagcgtgttcttgaagacattacaactcaggctctgtcacttcccggaggagcacaatca
agcagatactctgtcctataa
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integrated database retrieval system
