Eutrema salsugineum (saltwater cress): EUTSA_v10011553mg
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Entry
EUTSA_v10011553mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EUTSA_v10011553mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10011553mg
Enzymes [BR:
eus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EUTSA_v10011553mg
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EUTSA_v10011553mg
DNA repair and recombination proteins [BR:
eus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EUTSA_v10011553mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
NFACT_N
Ribosomal_S13
TFIIF_alpha
RBR
Peptidase_C37
Motif
Other DBs
NCBI-GeneID:
18011145
NCBI-ProteinID:
XP_006392913
UniProt:
V4KG95
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MPELPEVEAARRAIEYHCLGKKIKRVIIADDSKVIDGISPSDFQNSILGKTIVSARRKGK
NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL
SFTDKRRFAKVRLLENPASVRPISELGPDALLEPLTIDELAKSLAKKKITIKPLLLDQGF
ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDADTSQFPSIW
IFHSREAKPGKAFVDGKKIDFITAGGRTTAYVPELQKLTGKDAEKATKVRAGKRGVNSKE
DDGDGDEDEQESEEEDDSAKPKKGQKPKGRGKKPASKRKTEESDDEDDDAVADGGDDSEA
EEKVIKPRGRGAKPAIKRKREGKATSQAGKKPKGRKS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttccggaagtagaggcggcgaggagagcgatagagtatcactgtctcggt
aagaaaatcaagcgagtcatcatcgccgacgacagcaaagtcattgatggaatctctccg
tccgatttccaaaactcaatcctcggaaaaaccatcgtttctgctcgtaggaaggggaaa
aacctctggctcgagttagattccccgccatttccttctttccaattcggtatggctggt
gctatctatatcaaaggcgttgcagttactaaatacaagagatctgctgtaaaggattca
gaagagtggccatcaaagtattcaaagttcttcgttgagcttgatgatggtctggagctt
tcgtttactgacaagaggagatttgccaaagttcgacttctagaaaatcctgcgtctgtg
cgtccaatatcagagcttggtcctgatgcattgttggagccactgacaattgatgaatta
gcgaagagcttagccaaaaagaaaataaccataaaacctctcctacttgatcagggtttc
atttcaggtattgggaattggatcgcagatgaagtgttgtaccaagccagaatccacccg
ttgcagactgcttctagcctctccaaagagcaatgtgaagctttgcacacgtccatcaaa
gaggtgatagaaaaagcagtggaagttgatgcagacactagtcagtttcctagtatctgg
atttttcattctagggaagcgaagccaggaaaggcttttgttgatgggaagaagattgat
ttcatcactgctggtggaaggacaacagcttatgtcccagagctgcaaaaactcactggg
aaagacgctgagaaagcaaccaaggttagagcgggtaaaagaggtgtaaattccaaagaa
gacgatggagatggagacgaagatgaacaggaatctgaggaagaagatgatagtgctaaa
ccgaagaaaggacagaaaccaaagggtcgtggtaagaagcctgcatcgaagagaaaaaca
gaagaaagtgacgatgaggacgacgatgctgttgctgatggtggggatgatagcgaagct
gaagagaaagttattaaacccagaggtcgtggcgcaaagcctgcgataaagaggaaacgt
gaagggaaagctactagccaagctggtaagaagccaaagggaaggaaaagttga
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