Eutrema salsugineum (saltwater cress): EUTSA_v10019976mg
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Entry
EUTSA_v10019976mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EUTSA_v10019976mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10019976mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
Pre-60S particles
GTPases
EUTSA_v10019976mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_III
GTP_EFTU_D2
SRPRB
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
18023118
NCBI-ProteinID:
XP_006406106
UniProt:
V4LUS5
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MDESDGRKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRYMDYLDEEQRRAI
TMKSSSISLKYEDHSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR
QAWVEKLTPCLVLNKIDRLICELRLSPMEAYTRLIRIVHEVNGIVSAYKSAKYLSDIDSI
LASTSGEISAESPELLEDDEEVTFQPQKGNVVFVCALDGWGFGVSEFANFYASKLGAKAP
ALEKSLWGPYYYDSKTKMSVRKNSLSAGSKAKPMFVQFVLEPLWQVYEAALDPDGDRAIL
EKVIKSFNLSIPPRELQNKDPKNVLQSVMSRWLPLSDAVLSMAVKHLPDPIAAQAFRISR
LVPERKIIGGNDVDSSVLAEAELVRKSIEACDSSRDAPCVVFVSKMFAIPMKMIPQDGNH
RERMNGLNDEDSKSESDECFLAFARIFSGVLCAGQRVFVISALYDPLKGESSQKYIQEAE
LHSIYLMMGQGLTPVNEVKAGNVVAIRGLGPYISKSATLSSTRNCWPLASMEFQVSPTLR
VAIEPSDPADMSALMKGLRLLNRADPFVEITVSARGEHVLAAAGEVHLERCIKDLKDRFA
KVNLEVSSPLVSYRETIEGDGANLLESLRSLSLNTSDFVEKRTPNGRCVIRVHVMKLPHS
LTKLLDENTDLLGDIIGGKGSHSIKILESQGPSLVENVDPIEALKNELIEAGVLSSSETE
NDREKCKTEWSKLLKRIWALGPREKGPNILFAPDGKRIREDGSILVRGSPHVSQRLGFTE
DSTEITSETSETALYSEALTLESSIVSGFQLATASGPLCDEPMWGLAFTIESHLAEDSET
EKQPENFGIFTGQVMTAVKDACRAAVLQTNPRIVEAMYFCELNTAPEYLGPMYAVLSRRR
ARVLKEEMQEGSSLFTIHAYVPVSESFGFADELRKGTSGGASALMVLSHWEMLEEDPFFV
PKTEEEIEEFGDGASVLPNTARKLINAVRRRKGLHVEEKVVQHATKQRTLARKV
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtctgatggtagaaaagttaggaacatatgtatcttagcacatgtagaccac
ggtaaaacaaccctcgccgatcacctcatcgcttcctctggtggcggcgtgcttcacccg
agactcgccgggaagcttaggtacatggactatctcgatgaagaacagagacgtgcgata
acgatgaaaagctcttcgatttctctcaagtatgaggaccattctctgaacctgattgat
tcccctgggcacatggacttctgtagtgaagtctcaacagctgctcggctcagtgatggg
gccttggttttggttgatgctgttgaaggtgtccacattcagacgcatgctgtgttgcgt
caagcttgggtcgagaagttgactccttgcttagtgctcaacaagattgatcggttgatt
tgtgagctgaggttgagtcccatggaagcatatactcgcttgataaggattgttcatgag
gttaatgggatagtgagcgcgtataagtcggcgaagtatttgtctgatattgactctata
cttgcgagtacttctggtgagatttctgctgagagtcctgagttgttggaggatgatgaa
gaagttacgtttcagcctcagaagggtaatgtggtcttcgtgtgtgctcttgacgggtgg
ggttttggggtctctgagtttgctaatttctatgcgtctaagcttggagctaaggcgcct
gcgttggagaaatcgttatggggtccttattattatgattccaagacaaagatgagtgtg
aggaagaattctttaagtgcgggaagcaaggcaaaaccaatgtttgtgcagtttgtgctt
gagcctttgtggcaggtttacgaggctgcactagatcccgacggggacagagccattctt
gagaaagttatcaaatctttcaatctgtctattccaccacgcgaacttcagaacaaggat
cccaaaaacgtgcttcagtcagtgatgagccgttggcttcctttgtctgatgcagtcttg
tctatggctgtgaaacatctgcctgaccccattgcagcacaggcatttagaatctcgcgc
ttggttccagaaaggaaaatcatcggtggtaacgatgttgattcaagcgtacttgcagaa
gcagagcttgttagaaaatcaatcgaggcttgtgattctagccgagacgcaccttgtgtc
gtgtttgtgtctaaaatgtttgccattcccatgaaaatgattcctcaagatggaaaccac
agggagaggatgaacggtttaaacgacgaggacagcaaaagcgagtccgatgagtgtttc
ctcgcatttgctaggatctttagcggagttctttgtgcagggcaaagagtctttgtgatt
tccgctttatatgatcctctcaaaggtgaatcgtctcagaagtacattcaagaagcagaa
ctacattccatctatcttatgatgggacaaggattaacaccagtaaacgaggtgaaagcc
ggaaatgtagtggcaataagaggccttggaccatatatatcaaaaagcgcaacactttca
tctactagaaactgttggcccttagccagcatggagtttcaggtctctcccactctcaga
gtcgcgattgaaccgtcggatcctgcagatatgagtgctctgatgaaaggtctgaggctt
ctaaaccgagcagatccgtttgtggagatcacagtatctgcaagaggagagcatgtgctt
gctgctgctggagaagttcatctagaaagatgtatcaaggacttgaaagacagatttgca
aaagtgaaccttgaagtctcttcgcctctcgtgtcctacagggagacaattgaaggtgat
ggagctaatctcttggagagtttgagatctctaagcttgaatacttcggatttcgttgag
aagagaactccaaacggcagatgcgttatcagagtacacgtcatgaaactaccacactcg
ctaaccaagctgcttgatgagaacacagacttgcttggtgatataattggaggtaaaggc
agtcacagcattaagatactagaatcacaagggcctagcctcgtagagaatgtggatccc
atagaagcattgaagaacgagttaatcgaagctggcgttttatcaagttctgaaaccgaa
aatgatcgagagaaatgcaaaactgaatggtcgaaactgctcaagaggatttgggcgctt
ggtccaagagaaaaaggtccaaacatacttttcgctccagatggtaaaagaatccgcgag
gatggatcgattctcgtgagaggctctcctcatgtctctcaaagacttggcttcacagaa
gattctactgagattacttcagaaacatcagaaacagcactgtacagcgaagcactgact
ctagagagcagcatagtctctggttttcagctagcgacagcatcaggacctctatgcgat
gaaccaatgtggggattagctttcaccatcgagtctcatcttgcagaagattccgaaaca
gagaaacaacctgaaaactttggaatattcacaggacaagtcatgacagctgtcaaagac
gcgtgtagagccgccgtgcttcagacaaatccacgtatcgtcgaagcaatgtacttctgc
gaactaaacaccgcacctgagtatcttggtccgatgtatgcggttctgagcagaagacga
gctagagttctcaaggaagagatgcaagaagggtcgtctctgttcacgatccatgcgtac
gtgccggtttccgagagtttcggtttcgcagacgagctgagaaaaggaacgtctggtggt
gcgagtgctctcatggttttgagccattgggaaatgctcgaggaagatccgttctttgtt
ccgaaaactgaagaagagattgaagagtttggtgatggagctagtgttcttccgaatacg
gcgaggaagctcatcaatgccgtacggcgcaggaaagggttacacgttgaggagaaagtg
gttcaacacgccactaaacagagaaccttggctcgtaaagtttga
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