KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10020148mg
Entry
EUTSA_v10020148mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K13156  U11/U12 small nuclear ribonucleoprotein 48 kDa protein
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:eus03041]
    EUTSA_v10020148mg
Spliceosome [BR:eus03041]
 Other splicing related proteins
  Minor spliceosome components
   Minor spliceosome specific factors
    EUTSA_v10020148mg
SSDB
Motif
Pfam: zf-U11-48K Auxin_canalis
Other DBs
NCBI-GeneID: 18024854
NCBI-ProteinID: XP_006408216
UniProt: V4M0P8
LinkDB
Position
Unknown
AA seq 733 aa
MDRRRSFPNYQNPNPYIFHHCPPLNHNPNFFFRPPPLQNPNTYSIAPSPPPIRELSGTLS
SLQSLLSECQRTLASLSENLALDHSSLLQRDDNGGFVRCPFDPNHLMPPEALFLHSLRCP
NPLDLTHLLGSFSSYRTTLELPCEPQLNNGDGDLCFCLDDLTDFGSNFFYNDCPGAVNFS
ELDGKKRTLTLPSVLSVECSDFVGSDEKEKMSVLEKRLGVLPSGLCAIKNEIDQWRDFPT
SYSFSVLSSILGSEAIETSELSSWILVNSTRYGVIIDTYMRDHVFLLFRLSLKAVVKEAC
GFMIESDANAVGEQQIMSSKTRTFECAVLVRVLSWFASQLAVLYGEGSGKFFALDMFKQC
IVESASQIMLFRSEITRPKSSGVLGDLDDANSINKDVKMQNSFKKNSGREVGKTLDSAQV
ISVSRVAAAVAALYERSVLEGKMRAIRYPQPLTRYQRVAELGVMTVKADEERKRRPSYRP
IIDHDGLPRQRSSNQDINKMKTREELLAEERDYKRRRMSYRGKKVKRTPRQVLRDMIEEF
TEEIKLAGGIGCFEKGMPLHSPSSISNDQKESDFGYNTASLTLTDASPRFHKQWKGENRA
DIEYPMDTRTHTDKEKRYEEYDSGSSQRRKSHRSYKQHSDHEEYDSSSSQRQQSRRSYKH
SDRRNDESTRNKRHSLEAKSYHQSHRSSHEKNYSDNKTKKDDPYDRRSRKSRNQNSFEER
YNPEERYNPKERE
NT seq 2202 nt   +upstreamnt  +downstreamnt
atggatcgacgacggtcgtttccgaactatcaaaaccctaatccatatatcttccaccac
tgtcctcctctaaaccataatcctaatttcttcttccgacctcctcctttgcagaatcct
aacacttactccatcgctccgtctccgccaccgattcgcgagctctccggtacactctcc
tctttacagtccctattgtcggaatgtcaacgcaccttagcttctctatcggaaaattta
gctttagatcattcttctcttctccagagggacgacaatggcggttttgttcggtgccct
tttgatcctaatcaccttatgccaccggaagccctcttcctccattcacttcgctgccca
aatcctcttgacctcactcaccttcttggatcctttagtagttaccggaccacgctcgag
ttaccgtgtgaaccacagttgaataacggcgatggtgacctatgtttctgcttagatgac
ttgaccgattttgggagcaatttcttctacaacgattgtccaggtgctgtgaacttctcc
gagcttgatggaaaaaagcgaactctaacacttcctagtgtgctgtctgtggaatgcagc
gattttgtaggttctgatgaaaaagagaaaatgagtgtgttggagaaacgattaggggtt
ttaccgtctggtctatgcgcaataaaaaatgagattgatcaatggagggattttccaact
tcgtattcctttagcgttctttcttcgattctgggttcagaagcgattgaaacgagtgag
ctgagctcatggattctggttaattccacgagatacggtgttataatcgatacatacatg
agggatcatgtgttcttgctctttcggttgtccctgaaagcggttgtcaaggaagcttgt
ggatttatgatagagtctgatgctaatgccgttggtgagcagcagattatgagctccaaa
actagaacattcgagtgtgcagtcttggttcgagtgttgtcttggtttgcttctcaactt
gctgtcttgtatggagaaggaagtgggaagttttttgctctggatatgttcaagcagtgc
atagtagaatctgcctctcagataatgttgtttcggtcagaaataaccagacctaaatcc
tctggagttctcggcgatttggatgatgcaaactccatcaataaggatgtgaagatgcag
aattcctttaagaaaaattcaggtagggaagttggcaaaactttggacagcgctcaggtg
atatctgtgtcccgtgttgcagcagctgttgcagctttgtatgaaagatccgtgcttgaa
gggaaaatgagggcaatacgatatccccaaccactaacaagatatcaaagagtggccgag
cttggtgttatgacagttaaagctgatgaggaacggaaaagacgtcctagctaccgacct
attatcgaccatgatggtcttccgagacaacgctcatcaaatcaggatattaataaaatg
aagacaagagaagagcttttagctgaagagagagattacaagcgtcggagaatgtcatac
cgtggtaagaaggtgaaacgaacgcctcgacaggtgttgcgggatatgatagaagaattt
acagaagaaattaagctagcaggaggtatcggatgttttgagaagggaatgccattacac
tccccgtcttctataagcaacgatcagaaagaaagtgactttggatacaatactgcatca
ttaacattaacagacgcatcaccaagattccataagcaatggaaaggagagaaccgtgca
gatatagaatatccaatggatactagaacccatacagacaaagaaaagcggtatgaggag
tatgattctggtagctcacagagacggaagagtcacagatcttataagcagcacagtgat
cacgaggagtatgattcaagtagctcacagagacagcagagtcgcagatcttataagcac
agtgatcgaagaaatgatgaatccactaggaacaaacgacatagcctcgaagcgaaatct
tatcatcaaagccacagatcatctcatgagaagaattattcagataataagacgaaaaag
gatgatccttatgaccgccgcagtcggaaatctaggaatcaaaactcgtttgaagaaaga
tacaatccagaagaaagatacaatccaaaagaaagggagtga

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