Eutrema salsugineum (saltwater cress): EUTSA_v10022167mg
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Entry
EUTSA_v10022167mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EUTSA_v10022167mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10022167mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EUTSA_v10022167mg
Spliceosome [BR:
eus03041
]
Complex A
U2 snRNP components
U2 related factors
EUTSA_v10022167mg
Complex B
EUTSA_v10022167mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
18023858
NCBI-ProteinID:
XP_006407658
UniProt:
V4NR77
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MDVETKNRRDSGRDRSKERKRRYERVKRIDPEDEYDRDVGEKREKREGKDRRRRDRERKK
INDSEEEDERDKRRAKEKERRRKDGERDRRGSEKERKRERSKEDESDDDVKRNLNYGDDN
GGQKQVDEEGEKRRRRFQEWQELKRKKEEAEIESKTCKAWTLEGESDDDEQVPPQMDVDG
ETNPEDEEVIDPLDAFMNNMVLPEVGKLSNTASSLAVNDGGDQPKKGINQAIIQGEDSDS
DYSEPKSDDDPSLDEDDEEFMKIAKKTKGEKLSLVDHSEIEYKPFRKNFYIQANDISKMT
EEQVSAYRKELELKVHGKDVPRPVKSWYQTGLTNRILDTMKKLNYEKPMPVQAQALPVIM
SGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPAEAGDGPVGLVMAPTRELVQQIHTAIKK
FAKALSIRCVPVYGGSEIAQQISKLKRGTDIIVCTPGRMIDILCTNSGKITNLQRVTFLV
MDEADRMFDMGFEPQVTRIIQNIRPDRQTVLFSATFPRQIENLARRVLNKPVEIQAGGKN
VVNKDITQSVEIIAESERNSRLVELIEEWYERGKILVFVGSQGKCDALYNDLKNKCGYSS
ISEFKSKCKLLIATSVAARGLDVKELELVVNFDVPNHYEEYVHRVGRTGRAGRKGCAVTF
ISEDDAKYAPDLVKALELSEQPVPGCLKAIADGFMAKVKQGIEKAHGSGYGGSGFKFNEE
DEEVKKAQAKEYGYEEDKSDSEDENDVVVRKAASAAVNQLLPNGLQHTLAKIQADAMPE
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggagacgaagaatcgccgagatagtggccgtgatcgcagcaaggagcggaag
agacggtatgagagagttaagcgtattgatcctgaagatgagtacgatcgagacgttggt
gaaaagagggagaagcgtgaaggaaaggatcggagacggagggatagggagagaaagaag
attaacgattctgaagaagaagacgagagggataagcgcagagcgaaggagaaggaacga
aggcgaaaagatggagagagggataggcgaggaagtgagaaagaaaggaaaagggagagg
tcaaaagaagatgagagtgatgatgatgtcaagcgtaacttgaactatggagatgacaat
ggtgggcagaagcaggtggatgaggagggggaaaaacggaggagaagattccaggagtgg
caagagttgaagaggaaaaaggaggaagccgaaatcgaaagcaagacctgtaaggcttgg
acccttgaaggagaatctgatgatgatgaacaagtccctccgcagatggatgttgatgga
gagactaatcctgaagacgaagaggtaatcgatcctttagatgcttttatgaataatatg
gtattacctgaggttgggaagcttagcaatactgcttcttctctagcagtgaacgatggt
ggtgaccagccaaagaaaggcattaatcaagcgataattcaaggtgaagattctgattct
gattactcagaaccaaagagtgatgatgatccaagtttggacgaagacgacgaggagttc
atgaagatagcaaagaagacaaaaggagagaagttgtctcttgttgaccattcagaaata
gagtataaaccgttcaggaaaaacttctatatccaagcgaacgatatctcaaagatgaca
gaagaacaagttagtgcttaccgaaaggaattggagctgaaagttcatggaaaagatgta
ccaagacccgtaaaatcttggtaccagactgggctaaccaacaggattttggatacaatg
aagaagcttaactatgaaaagccaatgcctgtccaagcacaagcactccctgtcatcatg
agcggtagagactgcattggagttgcaaaaacagggtcaggtaaaacacttggttttgtt
ttgccaatgttgaggcatatcaaagatcagcctcctgctgaagctggtgatgggccggtt
gggcttgtaatggcacctactagagagcttgttcagcaaattcataccgctatcaaaaag
tttgccaaggcattgagtataaggtgtgtgcctgtgtatggaggatcagaaatcgcccag
caaataagtaagcttaagcgaggtactgacattatcgtctgcactcctggaagaatgatt
gatattctttgcacaaacagtgggaaaatcaccaatctgcaaagggtcacgtttctggta
atggatgaagctgatcgtatgtttgacatgggttttgagcctcaggttactcgtattatt
caaaacattcgacccgatcgtcaaactgtgctcttttctgccacttttccacgccaaatt
gaaaacttggcacgtagagtcttgaacaagcctgtagaaatacaggccggtggaaagaat
gttgtgaataaagatataactcagtctgttgaaatcatagcggagagtgagaggaactct
agacttgtggaacttattgaggaatggtatgagagaggaaagattttggtgtttgttgga
tcgcagggaaaatgtgatgctttgtataatgatttgaagaataaatgtggttacagttct
atatctgaatttaagagcaaatgcaagttgttgattgctacaagtgttgcagctaggggt
ctagatgtgaaagagcttgagttggttgtaaactttgatgtgccaaaccactatgaagag
tatgtgcatcgcgttggcaggacaggaagggcgggtaggaaaggctgtgctgtgacattt
atatccgaggacgatgcaaaatatgcaccagatttagtaaaagccctggaactttctgag
cagccagttcctggttgtctgaaagcaattgctgatggcttcatggcaaaagtgaaacag
ggtattgagaaagctcatggaagtggctatggtggtagtggctttaaattcaacgaagag
gacgaggaagttaagaaagcacaagccaaggagtatggctatgaggaagataagtctgac
tcagaagatgagaatgatgtagtagtaagaaaggcggcttctgctgctgttaaccaattg
ttgccaaatggtttacaacatacactcgcaaagattcaagctgatgcaatgcctgaa
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