KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10023361mg
Entry
EUTSA_v10023361mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EUTSA_v10023361mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:eus03041]
    EUTSA_v10023361mg
Spliceosome [BR:eus03041]
 Complex A
  U2 snRNP components
   U2 related factors
    EUTSA_v10023361mg
 Complex B
    EUTSA_v10023361mg
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 18010022
NCBI-ProteinID: XP_006392099
UniProt: V4JVF0
LinkDB
Position
Unknown
AA seq 594 aa
MSYEGNRDAVAVAIDENNNNENYIALASSLGGEDGHEDSKSRESHDLEKDSSRSREKDKG
RRRDKDGDKDRDSHREKDREREKSRDRDRERSKDRERDRHRRDRHRDRSRERSEKRERDR
DDVDDDDHYRSRDRDRRRSRDRDREERHRRRSRSRSRSRSERRSRSEHRHRSEHRSRSRS
RSRSKSKRVSGFDMAPPASAMLAAAAVAAAGQVPSVPTTATIPGMFPSMFPMVPGQQLGA
LPVMPVQAMTQQATRHARRVYVGGLPPSANEQSVATFFSQVMSAIGGNTAGPGDAVVNVY
INHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNLN
LAAVGLSTGSTGGLEGPDRIFVGGLPYYFTEEQIRELLESFGPLRGFNLVKDRETGNSKG
YAFCVFQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEEVLLHAQQQIALQR
LMLQPGLGGTPTKIVCLTQVVTADDLGDDEEYEDIMEDMRQEGGKFGNLVNVVIPRPNPD
HDPTPGVGKVFLEYADVDGAAKARSGMNGRKFGGNPVVAVYYAENKYAQGDYEG
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgagttacgagggtaacagagatgccgtcgccgtcgcaatcgatgaaaacaacaacaac
gagaactacatagctctggctagctctcttggtggcgaggacggtcacgaagactccaag
tctcgagagtctcatgatcttgaaaaggattcttcaagaagcagggagaaagacaaggga
aggagacgtgataaagatggggacaaggatcgtgatagccatcgtgagaaggaccgtgaa
agggagaaaagcagagatagagatagggaaagaagtaaggatagggaacgagaccgccat
cgtagggatcgtcatagggaccgtagcagagaacgaagtgagaaaagggaacgtgataga
gatgatgtggatgatgatgatcattacagaagtcgagaccgtgacaggaggaggtctcgc
gatcgtgacagagaggagaggcacaggcgacggtcacgctctcgttcaaggagccgctct
gaacgtaggtcaaggtcagaacataggcataggtctgaacatagatcacgttcgcgttca
cgttcacggtcaaagagcaagagggtgagtggattcgatatggcgcctcctgcttctgca
atgttagctgctgccgccgttgctgcagcaggtcaggttcctagtgtgccaactactgct
actattccgggaatgttccccagcatgttcccaatggttcctggtcagcaattgggcgcg
cttcctgtaatgccagttcaggcaatgacgcagcaggcaactaggcatgctcggcgagtg
tatgttggtggccttccaccatctgcaaatgaacagtcggtggcaacattctttagccaa
gtgatgtcggccattgggggaaacactgctgggccaggtgatgcggtggtcaatgtttat
ataaaccatgaaaagaagttcgcttttgtagaaatgagatctgttgaggaggcaagtaac
gcaatggcattagacggcattatattagagggagttcctgttaaggtgaggaggccaact
gactataacccgtcccttgctgcaactcttggtccgagccagcctaatcccaatctcaac
ttggctgctgttggattatctacggggtctactggtgggctcgagggtcctgaccgcatt
tttgtgggcgggcttccttattacttcacagaggaacagatcagggagctcttggagtct
tttggtcccctaagaggtttcaacttggttaaagacagggaaactggaaattccaagggg
tatgcgttctgtgttttccaagatccttcggtaaccgatatcgcatgtgccgccctgaac
gggattaagatgggcgataagacacttacagttaggcgtgccatccagggtgcaattcaa
cctaaacctgagcaagaagaagtgttacttcatgcccaacaacagattgcattgcagagg
cttatgctgcaacctggactaggaggcacacccaccaagattgtctgcttgactcaagtg
gttacagctgatgatcttggtgacgatgaagaatatgaagacataatggaggacatgaga
caagaaggtggaaaattcggtaacttggtgaatgttgtgattccaagacctaatccggat
catgatccaacaccaggagttggaaaggttttcttagagtatgctgatgtggatggggca
gcaaaggctaggtcggggatgaacggaagaaagtttggaggaaacccagtggtggctgtg
tattacgccgagaacaagtatgcacaaggcgactacgaaggctga

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