Eutrema salsugineum (saltwater cress): EUTSA_v10028358mg
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Entry
EUTSA_v10028358mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
EUTSA_v10028358mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eus04131
]
EUTSA_v10028358mg
Membrane trafficking [BR:
eus04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
EUTSA_v10028358mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps8
Clathrin
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
18014914
NCBI-ProteinID:
XP_006396337
UniProt:
V4KIX1
LinkDB
All DBs
Position
Unknown
AA seq
1962 aa
AA seq
DB search
MELDLDSFLVSDSDSESDLDSSSVPHRTVDEILNASSSSSPSSSPPSSPPLIRDQVNRRN
QNDPTRRLSEALSNVSVRPESVDSEVYRGFPRVSDPTRRNSPSTSSLRQLPLPSLFAGVR
SNVKPGAALAAAVAASRLVPTPHAAIIKSRRASSASSELMQQVLGAGESVSNQDADDQEV
FSTNGVSVGVAVGSVSVDEFRSSGGESRLEDEDNGAELASQESEANVIEVQPSDSNVTVA
DARDYEENSKPDLVTASYGVDAEGDVPAEQETMTTMEAENAAVEGVTDDTVVVSLLESSG
SQHLNDSDGNSSSYSQSGDAKASNDEESSVGDVKNDDLDRITPDSKEEGVDAFIRDDGSS
MSGISELVEERIEELEKERMSKREKLKSRSFRKQLDLAEEFEKKQAYTGLHWEEGAAAQP
MRLEGVKIGSTNLGYFDVDANNLISGTISSQAFKRDHGSPQVLAVHLNFIAVGTSKGVIV
VVPSKYSSDTADQMESKLIWLGLQGDRSLSPVTSVCFNQQGGLLLAGYGDGHVTVWDVQR
ASVAKVITEHTAPVVYAFFIGRDSQGSRQFKVITSDTKGVVFKHTFSWTLLLNMYSVKTQ
CLLDGQKNGMVLSASPLPDDIFGSSLASSKVGNTAVPSSSISSMMGGVVGVDSSWKLFNE
DSSAVEEGVVIFVTYQTGLVVKLIPNLEVYAQLPRPEGVREGSMPYTAWKCSMENSSKEA
EDRVSFLAIAWDRRVQVAKLVKSDLKEYAKWSLDSVAIGVVWLDDQLLVIPTVTGHLYLF
TRDGVVIHQTNFSVDGSSGNDLISYHTYFTNVFGNPEKAYHNSVGVRGASVYILGTAHLV
ISRLLPWKERVDVLRRGGDWMGAFNMAMSLFNGQAHGVVDLPKTVDAIREAIAPSLAELL
LSYVDEVFSYISIAFSNQIEKNGVTHEPSSGTKNANLEIEEQYNRVGGVAVEFCVHINRM
DLLFDEIFSRFVAVQQRDTFLELLEPYILKDMLGSLPPEIMQALVEHYSRKGWLQRIEQC
VLHMDISSLDFNQVVRICREHGLYGALLYLFNKGLDDFRSPLEELLIVLRNSERQRATTI
GYRMLVYLKYCFLGLAFPPGHGTLIPTRLPSLRTELIQFLLEKSNVHDSSTCVKSQRIYL
NLYHLLEMDTEATLDVLRYAFAENEMVNHENHLLESGEVSLESKTDSSMPEDGCNDMLIQ
NLIDALVLVLDAGLNQPDESGDPDGSKSDKNWPSKEDRSHLFEFVAYYAARGRVSIPKSI
LAHILEYLTSDHILRTYNISPKMRENQLLNLLKAVPETNWDAAYVSQLCETAHFYKVCGY
IHTIGRRYVAALESYMKEADEPLHSFCYVNKMLSQLRGDEFTAFHSAIISRIPQLLELSR
EGAFFLIIDNLKDNITRILEQLHSHPRSLFLYLKTVIEVHLSGSLEFSHLRKHEAVDSSG
ENIRRDMPKEVEIYLEGLNGFPKFIQDNPVNVTDDMIELYVELLCKYEPKSVLRFLETFD
SYRVEHCLRLCQEYGIIDAAAFLLERVGDAASALSLTLSGLNEKFAELENAVECLVSELM
LGASEEASLELFSSALELKEVHDIQGVLQACIGLCQRNTPRLNPEESEILWFRFLDTFCE
PSMDSYQEPRNVNEIYKGLADVKSLELPVDEAADTVKWRIPRSDAAGTHILRKLISQFIK
EIVEGMIGYVRLPTIMSKLLSDNGTQEFGDFKLTILGMLGTYGFERRILDTAKSLIEEDT
FYTMSLLKKGASHGYAPISLLCCICNCPLTKTFSTLRVRVFNCGHATHIQCEPSENEMSS
SSSSSSSSSIHVASSGCPVCMTKKTTQRSSKGKSFYLDYGLISTVSSSTGTSQRTSLYSH
ENEMIDHSHSQQIPRFEILTNLQKDQRLVQIESLPRLRLSPPAVYHEKVSRVSGFTPGES
SGKDTKPVKPSQSGLSMKMKAKGSIFRPRLGKSVFSRPRVGN
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgatctcgattcgttcctagtatcggactcggattccgaatccgatttggat
tcttcatccgttcctcaccgtacagtcgacgaaattctcaacgcttccagttcttcatct
ccgtcgtcttctcctccttcatctccgccgttgattagagaccaagttaaccggcggaat
caaaacgatccgactcgccgcttatcagaagctctttcaaacgtttccgtgagacctgaa
tctgttgattccgaagtatatcgcggattccctcgcgtaagcgatccgacgcggcgaaat
tcgccatcgacttcttctctaagacagttgccattgccgtcgctattcgcaggagtgcgg
tcgaatgtgaagcccggcgcggcgcttgcggcggctgtggctgcttcgagattggttcct
acaccacacgctgctatcatcaagtcgaggagagctagcagtgctagtagcgagttgatg
cagcaggttttgggagctggagaatcagtttcaaatcaagacgcagatgatcaggaagta
ttttctacaaatggcgtttctgtcggagttgctgttggatccgtttctgttgatgaattt
cgttcttccggtggagaatctcgtctggaggatgaggataacggagctgaacttgcaagt
caagaaagcgaagctaatgtaatagaagtccaacctagtgatagtaatgtgaccgttgct
gatgcccgtgattatgaggaaaactcaaaacctgacttagtcactgcctcctatggtgtt
gatgctgaaggagacgtccctgcagaacaagagacgatgaccacaatggaagctgaaaat
gctgctgtggaaggcgtcacagatgacacagttgtcgtttctttgctggagtcttcaggg
tctcaacatttgaatgattctgatgggaattcctcttcttattctcaatcgggtgatgct
aaggcaagcaacgatgaggaatcaagtgttggagatgttaagaatgatgatttagataga
attacaccggattctaaagaagagggagttgatgcttttattcgtgatgatggaagctca
atgtctggcatttcagagcttgtggaagagaggattgaggagttggaaaaagaaaggatg
agtaaaagagagaaactaaaatcacgatcttttaggaaacagcttgacttggctgaagag
tttgagaagaaacaagcatatactggtttgcattgggaggaaggggctgctgctcagcca
atgagacttgagggtgttaagatcggttcgacgaatttaggctactttgatgttgatgct
aacaatctcatcagcggaaccatttcgtcgcaggcatttaagagagaccatggttctcct
caggttttggctgttcatttgaattttattgcagtgggtacgtccaagggggtcatcgtc
gttgtaccaagtaaatattcttctgatactgcagatcagatggaatcaaagctgatttgg
cttggtttacaaggagacagatccctgtccccggttacctcggtttgcttcaatcagcaa
gggggcctcctgctagccggttatggtgatggacatgttacagtttgggacgtgcagaga
gcgtcggtagcaaaagtgatcactgaacacactgcaccagtagtttatgcgttttttata
ggtcgggattctcaaggttctcgccaatttaaagtaatcacaagtgataccaagggtgtc
gttttcaagcatactttctcttggactctgttgttgaacatgtactcggtaaaaacgcag
tgtcttctcgatggacaaaaaaatggaatggtcctctcagcatcacctctgcctgatgat
atttttggaagctccttggcctcttctaaggtgggtaacactgcagttccatccagcagt
ataagtagcatgatgggaggtgttgttggggttgattcaagttggaagctctttaatgag
gattcatctgcggtagaagaaggggttgtcatatttgtcacctatcaaactggactggtg
gtaaagctcattccaaatttggaggtgtatgcacaacttcctaggccagaaggggttcgg
gagggttccatgccatacactgcctggaaatgctcaatggaaaattcttctaaggaggca
gaagatagggtttcttttcttgccattgcctgggatcgtagagttcaggttgccaagttg
gtaaaatcagacctaaaggaatatgccaaatggtcacttgacagtgtagctattggtgtg
gtttggctggatgaccagttgctggtgatcccaactgtgacgggccatttgtatctgttc
acaagagatggtgtagtaattcaccagacaaacttttctgtggatggttcttcagggaat
gacctgatttcctatcatacatactttacgaatgtctttggaaatcctgagaaagcttat
cacaactctgtgggtgtcagaggggcttcagtatacattctcgggactgctcatcttgtt
atctccagacttttgccatggaaggagcgggttgatgttttaaggagaggaggtgattgg
atgggtgcatttaacatggcaatgtcactttttaatgggcaggctcatggggttgttgac
ctccccaaaactgtggacgccataagggaagccatagcacccagtttagcagagttgcta
ctctcctatgtagatgaagtattttcttatatctcaatagcattttccaaccagattgaa
aaaaatggagtaactcatgagccaagcagtggaaccaagaatgctaatttagagatagaa
gaacaatacaatcgtgttggtggtgttgccgttgaattttgtgttcatattaacaggatg
gatttgctcttcgatgaaatattttccagatttgtggctgtacaacaaagagatacattt
ttggaacttttggagccttatattttaaaggatatgcttggatcgcttcctccagagatt
atgcaagcactggtagaacattatagtaggaaaggatggctacaaagaattgagcagtgt
gttctgcacatggatatttcttccttagatttcaatcaggttgtcagaatttgccgtgag
catggcctttatggggccttgctatatcttttcaacaaagggttggatgatttcaggtca
cctctggaggaactcttgattgtcttacggaacagtgagagacaaagggctacaacaatt
gggtaccggatgcttgtttatctaaaatactgctttcttggtttggcttttccaccagga
catggaactctgattcctacacgcttgccatcccttaggaccgagctgattcagtttcta
ctggagaaatcaaacgtccatgactctagtacatgtgtaaaatctcaacggatttacttg
aacctctaccacctgctagagatggatactgaagccactttagatgtcctaagatatgca
tttgcagaaaatgaaatggtgaatcatgagaatcatctgctggagtccggtgaagtaagt
ttggagtccaagactgatagcagtatgcccgaagatggatgtaacgatatgttgatccag
aatctgatagatgctctagttcttgttcttgatgcggggttaaatcaacctgatgaatct
ggcgatccagatggttcaaaatcagataaaaattggccctccaaggaggatagaagtcat
ttatttgagtttgttgcatattatgcagcacgtggcagagttagtattccgaagagcata
ttggcacatattttagagtacttaacatcagatcacattcttcggacatataacatatct
cctaaaatgagagagaaccaattactaaaccttttgaaagctgtaccggagactaattgg
gatgcagcttatgtgtctcagctttgtgagacagcacatttttataaggtctgtggctat
attcatactatcggtcgacgatacgttgctgctttagaaagctacatgaaagaggcagat
gaacccctacattcgttttgctacgtgaacaagatgctctcacagttgaggggagatgaa
tttactgcttttcattctgcaataatttctaggattccacagctcctagaattgagcaga
gagggagcattctttctgatcattgataatctgaaagacaacattacacgcattctagaa
cagctccattctcatccaagaagcttgttcctttatctcaagactgtcattgaggttcac
ttgtctgggagtcttgaattttctcatctaagaaaacatgaggccgtagatagttcgggt
gaaaacattagaagggatatgcccaaagaggttgagatttatttggaaggacttaatggc
tttcccaaattcatccaagataatccagtcaatgtgactgatgatatgattgagctttac
gtggagctattatgcaagtacgaaccgaagtccgtcttgagattcctggaaacctttgac
agctaccgagtggaacactgtctacgtctctgccaggaatatggtattatagatgcagcg
gcattcctcttggaaagggtaggtgatgcagcaagcgctttgtcacttacactctctgga
cttaacgaaaaatttgccgagcttgaaaatgcggtggaatgcctagtgtcagaattgatg
ttgggtgctagcgaagaagccagcttggaactgttcagtagtgctctagagttgaaggag
gtacatgacatacaaggtgttttacaagcctgtataggattgtgtcaacgcaacactccc
cgtcttaatccagaggagtcagagattctttggtttcgctttcttgatactttctgtgaa
ccttcgatggattcatatcaggaaccgaggaacgtcaatgaaatatacaaaggccttgcg
gatgttaaatcgttggaactgcctgtagatgaagcagccgacacagtcaagtggagaatt
ccaagatctgatgcagcgggtacacacatcctgaggaaactcatatctcagtttatcaaa
gagattgttgaaggaatgataggatatgttcgtcttccaacaatcatgtcaaaacttctt
tctgacaatggtactcaagaatttggtgattttaaacttacaatattgggaatgcttgga
acatatggcttcgagcggagaatactggatactgcgaagtccttaatcgaagaggataca
ttctacaccatgagcttactcaagaaaggtgcttctcatgggtatgcacccataagtttg
ctttgttgtatatgcaattgtcctctcaccaagacattctctactcttcgtgtacgtgtt
ttcaactgcggccacgcaacacatattcagtgtgaaccgtcagagaatgagatgtcatca
tcatcatcatcatcatcatcatcatcaattcacgtcgcgtcatcaggttgtcctgtttgt
atgaccaagaagaccacgcaaagatcatctaaaggtaaatcattctacctagattatgga
ctgataagcacagtttcttcaagcaccgggacttcacaacgcacgtcgctttactcacat
gagaatgaaatgatcgatcattctcatagccaacaaataccaaggtttgaaatcctaacc
aatctacagaaagatcagagattggtacagatagagagcttgcctcgattaaggctttca
cctccagctgtgtaccacgaaaaagtgagcagagtctcgggttttacaccgggtgagagt
agcggcaaagacacgaaacctgtaaaaccatcccaaagtggactgagtatgaaaatgaaa
gcaaaaggatcgatttttcggccaagacttggtaagtccgttttttcaaggccaagagtt
ggtaattag
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integrated database retrieval system