KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10028358mg
Entry
EUTSA_v10028358mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K20178  vacuolar protein sorting-associated protein 8
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:eus00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    EUTSA_v10028358mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:eus04131]
    EUTSA_v10028358mg
Membrane trafficking [BR:eus04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    EUTSA_v10028358mg
SSDB
Motif
Pfam: Vps8 Clathrin WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 18014914
NCBI-ProteinID: XP_006396337
UniProt: V4KIX1
LinkDB
Position
Unknown
AA seq 1962 aa
MELDLDSFLVSDSDSESDLDSSSVPHRTVDEILNASSSSSPSSSPPSSPPLIRDQVNRRN
QNDPTRRLSEALSNVSVRPESVDSEVYRGFPRVSDPTRRNSPSTSSLRQLPLPSLFAGVR
SNVKPGAALAAAVAASRLVPTPHAAIIKSRRASSASSELMQQVLGAGESVSNQDADDQEV
FSTNGVSVGVAVGSVSVDEFRSSGGESRLEDEDNGAELASQESEANVIEVQPSDSNVTVA
DARDYEENSKPDLVTASYGVDAEGDVPAEQETMTTMEAENAAVEGVTDDTVVVSLLESSG
SQHLNDSDGNSSSYSQSGDAKASNDEESSVGDVKNDDLDRITPDSKEEGVDAFIRDDGSS
MSGISELVEERIEELEKERMSKREKLKSRSFRKQLDLAEEFEKKQAYTGLHWEEGAAAQP
MRLEGVKIGSTNLGYFDVDANNLISGTISSQAFKRDHGSPQVLAVHLNFIAVGTSKGVIV
VVPSKYSSDTADQMESKLIWLGLQGDRSLSPVTSVCFNQQGGLLLAGYGDGHVTVWDVQR
ASVAKVITEHTAPVVYAFFIGRDSQGSRQFKVITSDTKGVVFKHTFSWTLLLNMYSVKTQ
CLLDGQKNGMVLSASPLPDDIFGSSLASSKVGNTAVPSSSISSMMGGVVGVDSSWKLFNE
DSSAVEEGVVIFVTYQTGLVVKLIPNLEVYAQLPRPEGVREGSMPYTAWKCSMENSSKEA
EDRVSFLAIAWDRRVQVAKLVKSDLKEYAKWSLDSVAIGVVWLDDQLLVIPTVTGHLYLF
TRDGVVIHQTNFSVDGSSGNDLISYHTYFTNVFGNPEKAYHNSVGVRGASVYILGTAHLV
ISRLLPWKERVDVLRRGGDWMGAFNMAMSLFNGQAHGVVDLPKTVDAIREAIAPSLAELL
LSYVDEVFSYISIAFSNQIEKNGVTHEPSSGTKNANLEIEEQYNRVGGVAVEFCVHINRM
DLLFDEIFSRFVAVQQRDTFLELLEPYILKDMLGSLPPEIMQALVEHYSRKGWLQRIEQC
VLHMDISSLDFNQVVRICREHGLYGALLYLFNKGLDDFRSPLEELLIVLRNSERQRATTI
GYRMLVYLKYCFLGLAFPPGHGTLIPTRLPSLRTELIQFLLEKSNVHDSSTCVKSQRIYL
NLYHLLEMDTEATLDVLRYAFAENEMVNHENHLLESGEVSLESKTDSSMPEDGCNDMLIQ
NLIDALVLVLDAGLNQPDESGDPDGSKSDKNWPSKEDRSHLFEFVAYYAARGRVSIPKSI
LAHILEYLTSDHILRTYNISPKMRENQLLNLLKAVPETNWDAAYVSQLCETAHFYKVCGY
IHTIGRRYVAALESYMKEADEPLHSFCYVNKMLSQLRGDEFTAFHSAIISRIPQLLELSR
EGAFFLIIDNLKDNITRILEQLHSHPRSLFLYLKTVIEVHLSGSLEFSHLRKHEAVDSSG
ENIRRDMPKEVEIYLEGLNGFPKFIQDNPVNVTDDMIELYVELLCKYEPKSVLRFLETFD
SYRVEHCLRLCQEYGIIDAAAFLLERVGDAASALSLTLSGLNEKFAELENAVECLVSELM
LGASEEASLELFSSALELKEVHDIQGVLQACIGLCQRNTPRLNPEESEILWFRFLDTFCE
PSMDSYQEPRNVNEIYKGLADVKSLELPVDEAADTVKWRIPRSDAAGTHILRKLISQFIK
EIVEGMIGYVRLPTIMSKLLSDNGTQEFGDFKLTILGMLGTYGFERRILDTAKSLIEEDT
FYTMSLLKKGASHGYAPISLLCCICNCPLTKTFSTLRVRVFNCGHATHIQCEPSENEMSS
SSSSSSSSSIHVASSGCPVCMTKKTTQRSSKGKSFYLDYGLISTVSSSTGTSQRTSLYSH
ENEMIDHSHSQQIPRFEILTNLQKDQRLVQIESLPRLRLSPPAVYHEKVSRVSGFTPGES
SGKDTKPVKPSQSGLSMKMKAKGSIFRPRLGKSVFSRPRVGN
NT seq 5889 nt   +upstreamnt  +downstreamnt
atggaactcgatctcgattcgttcctagtatcggactcggattccgaatccgatttggat
tcttcatccgttcctcaccgtacagtcgacgaaattctcaacgcttccagttcttcatct
ccgtcgtcttctcctccttcatctccgccgttgattagagaccaagttaaccggcggaat
caaaacgatccgactcgccgcttatcagaagctctttcaaacgtttccgtgagacctgaa
tctgttgattccgaagtatatcgcggattccctcgcgtaagcgatccgacgcggcgaaat
tcgccatcgacttcttctctaagacagttgccattgccgtcgctattcgcaggagtgcgg
tcgaatgtgaagcccggcgcggcgcttgcggcggctgtggctgcttcgagattggttcct
acaccacacgctgctatcatcaagtcgaggagagctagcagtgctagtagcgagttgatg
cagcaggttttgggagctggagaatcagtttcaaatcaagacgcagatgatcaggaagta
ttttctacaaatggcgtttctgtcggagttgctgttggatccgtttctgttgatgaattt
cgttcttccggtggagaatctcgtctggaggatgaggataacggagctgaacttgcaagt
caagaaagcgaagctaatgtaatagaagtccaacctagtgatagtaatgtgaccgttgct
gatgcccgtgattatgaggaaaactcaaaacctgacttagtcactgcctcctatggtgtt
gatgctgaaggagacgtccctgcagaacaagagacgatgaccacaatggaagctgaaaat
gctgctgtggaaggcgtcacagatgacacagttgtcgtttctttgctggagtcttcaggg
tctcaacatttgaatgattctgatgggaattcctcttcttattctcaatcgggtgatgct
aaggcaagcaacgatgaggaatcaagtgttggagatgttaagaatgatgatttagataga
attacaccggattctaaagaagagggagttgatgcttttattcgtgatgatggaagctca
atgtctggcatttcagagcttgtggaagagaggattgaggagttggaaaaagaaaggatg
agtaaaagagagaaactaaaatcacgatcttttaggaaacagcttgacttggctgaagag
tttgagaagaaacaagcatatactggtttgcattgggaggaaggggctgctgctcagcca
atgagacttgagggtgttaagatcggttcgacgaatttaggctactttgatgttgatgct
aacaatctcatcagcggaaccatttcgtcgcaggcatttaagagagaccatggttctcct
caggttttggctgttcatttgaattttattgcagtgggtacgtccaagggggtcatcgtc
gttgtaccaagtaaatattcttctgatactgcagatcagatggaatcaaagctgatttgg
cttggtttacaaggagacagatccctgtccccggttacctcggtttgcttcaatcagcaa
gggggcctcctgctagccggttatggtgatggacatgttacagtttgggacgtgcagaga
gcgtcggtagcaaaagtgatcactgaacacactgcaccagtagtttatgcgttttttata
ggtcgggattctcaaggttctcgccaatttaaagtaatcacaagtgataccaagggtgtc
gttttcaagcatactttctcttggactctgttgttgaacatgtactcggtaaaaacgcag
tgtcttctcgatggacaaaaaaatggaatggtcctctcagcatcacctctgcctgatgat
atttttggaagctccttggcctcttctaaggtgggtaacactgcagttccatccagcagt
ataagtagcatgatgggaggtgttgttggggttgattcaagttggaagctctttaatgag
gattcatctgcggtagaagaaggggttgtcatatttgtcacctatcaaactggactggtg
gtaaagctcattccaaatttggaggtgtatgcacaacttcctaggccagaaggggttcgg
gagggttccatgccatacactgcctggaaatgctcaatggaaaattcttctaaggaggca
gaagatagggtttcttttcttgccattgcctgggatcgtagagttcaggttgccaagttg
gtaaaatcagacctaaaggaatatgccaaatggtcacttgacagtgtagctattggtgtg
gtttggctggatgaccagttgctggtgatcccaactgtgacgggccatttgtatctgttc
acaagagatggtgtagtaattcaccagacaaacttttctgtggatggttcttcagggaat
gacctgatttcctatcatacatactttacgaatgtctttggaaatcctgagaaagcttat
cacaactctgtgggtgtcagaggggcttcagtatacattctcgggactgctcatcttgtt
atctccagacttttgccatggaaggagcgggttgatgttttaaggagaggaggtgattgg
atgggtgcatttaacatggcaatgtcactttttaatgggcaggctcatggggttgttgac
ctccccaaaactgtggacgccataagggaagccatagcacccagtttagcagagttgcta
ctctcctatgtagatgaagtattttcttatatctcaatagcattttccaaccagattgaa
aaaaatggagtaactcatgagccaagcagtggaaccaagaatgctaatttagagatagaa
gaacaatacaatcgtgttggtggtgttgccgttgaattttgtgttcatattaacaggatg
gatttgctcttcgatgaaatattttccagatttgtggctgtacaacaaagagatacattt
ttggaacttttggagccttatattttaaaggatatgcttggatcgcttcctccagagatt
atgcaagcactggtagaacattatagtaggaaaggatggctacaaagaattgagcagtgt
gttctgcacatggatatttcttccttagatttcaatcaggttgtcagaatttgccgtgag
catggcctttatggggccttgctatatcttttcaacaaagggttggatgatttcaggtca
cctctggaggaactcttgattgtcttacggaacagtgagagacaaagggctacaacaatt
gggtaccggatgcttgtttatctaaaatactgctttcttggtttggcttttccaccagga
catggaactctgattcctacacgcttgccatcccttaggaccgagctgattcagtttcta
ctggagaaatcaaacgtccatgactctagtacatgtgtaaaatctcaacggatttacttg
aacctctaccacctgctagagatggatactgaagccactttagatgtcctaagatatgca
tttgcagaaaatgaaatggtgaatcatgagaatcatctgctggagtccggtgaagtaagt
ttggagtccaagactgatagcagtatgcccgaagatggatgtaacgatatgttgatccag
aatctgatagatgctctagttcttgttcttgatgcggggttaaatcaacctgatgaatct
ggcgatccagatggttcaaaatcagataaaaattggccctccaaggaggatagaagtcat
ttatttgagtttgttgcatattatgcagcacgtggcagagttagtattccgaagagcata
ttggcacatattttagagtacttaacatcagatcacattcttcggacatataacatatct
cctaaaatgagagagaaccaattactaaaccttttgaaagctgtaccggagactaattgg
gatgcagcttatgtgtctcagctttgtgagacagcacatttttataaggtctgtggctat
attcatactatcggtcgacgatacgttgctgctttagaaagctacatgaaagaggcagat
gaacccctacattcgttttgctacgtgaacaagatgctctcacagttgaggggagatgaa
tttactgcttttcattctgcaataatttctaggattccacagctcctagaattgagcaga
gagggagcattctttctgatcattgataatctgaaagacaacattacacgcattctagaa
cagctccattctcatccaagaagcttgttcctttatctcaagactgtcattgaggttcac
ttgtctgggagtcttgaattttctcatctaagaaaacatgaggccgtagatagttcgggt
gaaaacattagaagggatatgcccaaagaggttgagatttatttggaaggacttaatggc
tttcccaaattcatccaagataatccagtcaatgtgactgatgatatgattgagctttac
gtggagctattatgcaagtacgaaccgaagtccgtcttgagattcctggaaacctttgac
agctaccgagtggaacactgtctacgtctctgccaggaatatggtattatagatgcagcg
gcattcctcttggaaagggtaggtgatgcagcaagcgctttgtcacttacactctctgga
cttaacgaaaaatttgccgagcttgaaaatgcggtggaatgcctagtgtcagaattgatg
ttgggtgctagcgaagaagccagcttggaactgttcagtagtgctctagagttgaaggag
gtacatgacatacaaggtgttttacaagcctgtataggattgtgtcaacgcaacactccc
cgtcttaatccagaggagtcagagattctttggtttcgctttcttgatactttctgtgaa
ccttcgatggattcatatcaggaaccgaggaacgtcaatgaaatatacaaaggccttgcg
gatgttaaatcgttggaactgcctgtagatgaagcagccgacacagtcaagtggagaatt
ccaagatctgatgcagcgggtacacacatcctgaggaaactcatatctcagtttatcaaa
gagattgttgaaggaatgataggatatgttcgtcttccaacaatcatgtcaaaacttctt
tctgacaatggtactcaagaatttggtgattttaaacttacaatattgggaatgcttgga
acatatggcttcgagcggagaatactggatactgcgaagtccttaatcgaagaggataca
ttctacaccatgagcttactcaagaaaggtgcttctcatgggtatgcacccataagtttg
ctttgttgtatatgcaattgtcctctcaccaagacattctctactcttcgtgtacgtgtt
ttcaactgcggccacgcaacacatattcagtgtgaaccgtcagagaatgagatgtcatca
tcatcatcatcatcatcatcatcatcaattcacgtcgcgtcatcaggttgtcctgtttgt
atgaccaagaagaccacgcaaagatcatctaaaggtaaatcattctacctagattatgga
ctgataagcacagtttcttcaagcaccgggacttcacaacgcacgtcgctttactcacat
gagaatgaaatgatcgatcattctcatagccaacaaataccaaggtttgaaatcctaacc
aatctacagaaagatcagagattggtacagatagagagcttgcctcgattaaggctttca
cctccagctgtgtaccacgaaaaagtgagcagagtctcgggttttacaccgggtgagagt
agcggcaaagacacgaaacctgtaaaaccatcccaaagtggactgagtatgaaaatgaaa
gcaaaaggatcgatttttcggccaagacttggtaagtccgttttttcaaggccaagagtt
ggtaattag

DBGET integrated database retrieval system