Echinicola vietnamensis: Echvi_1987
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Entry
Echvi_1987 CDS
T02388
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
evi
Echinicola vietnamensis
Pathway
evi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
evi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Echvi_1987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
evi03400
]
Echvi_1987
DNA repair and recombination proteins [BR:
evi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Echvi_1987
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Echvi_1987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
HHH_5
RecR_ZnF
RecR_C
Toprim
HHH
5_3_exonuc
IMS_HHH
TIP49_C
Motif
Other DBs
NCBI-ProteinID:
AGA78240
UniProt:
L0G035
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Position
complement(2342095..2342715)
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AA seq
206 aa
AA seq
DB search
MNFPSKLIEDAVNEISRLPGIGKKTALRLALHLLKQPEAIAENLTDAITKLRKETAYCRV
CHNISDQEICSVCQSPRRDRSLICVVEDIPDVLAIENTSQYNGLYHVLGGVISPIQGIGP
EELKIASLLTRIDQPHSGEAVSEVILALPSTMEGDTTAFYITRKLKEKGIKVSTIARGIP
IGGELEYTDEVTLGRSILTRVNYSVD
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
gtgaacttcccctccaaactcatcgaagacgcggtcaacgagatcagcagactgcccggt
atcggcaaaaaaacggcactacgtctcgccctgcatctcctgaagcaacctgaagccatt
gcagaaaaccttaccgacgccatcaccaagcttcgaaaggaaactgcctactgccgcgta
tgccataatatttccgaccaagagatttgcagcgtatgccaaagtccgcgccgtgaccgg
agccttatctgcgtcgtggaggatattcctgacgtgctggcgatagaaaacacttcccaa
tacaatggtctttaccatgtgctcggcggtgtcatttcccccattcaagggattggcccc
gaagagttgaaaatagcatccttgctaaccagaattgatcaaccacactctggagaggct
gtttccgaagttatccttgccctgccctccaccatggaaggcgacaccacggctttttat
atcacacgaaagctcaaagaaaaaggcatcaaagtcagcaccatcgccaggggcatcccc
atcggcggtgaactggaatacactgatgaggtcaccttgggcagaagcatccttacccgt
gtcaattactctgtagactga
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