Ficedula albicollis (collared flycatcher): 101809128
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Entry
101809128 CDS
T02815
Symbol
TRIM9
Name
(RefSeq) tripartite motif containing 9
KO
K10649
tripartite motif-containing protein 9/67
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101809128 (TRIM9)
04121 Ubiquitin system [BR:
fab04121
]
101809128 (TRIM9)
Membrane trafficking [BR:
fab04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
101809128 (TRIM9)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101809128 (TRIM9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
fn3
zf-B_box
PRY
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
EntA_Immun
Motif
Other DBs
NCBI-GeneID:
101809128
NCBI-ProteinID:
XP_016154434
LinkDB
All DBs
Position
5:62321760..62387772
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AA seq
718 aa
AA seq
DB search
MEEMEEELKCPVCGSFYREPIILPCSHNLCQAGGRRASGSAVSDYDYLDLDKMSLYSEAD
SGYGSYGGFASAPTTPCQKSPNGVRVFPPAAPPPPAALAPPPGMCEQCDVFYCDPCRLRC
HPPRGPLAKHRLVPPAQGRVSRRLSPRKISTCTDHELENHSMYCVQCKSPVCYQCLEEGK
HSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLV
AQCDALIDALNRRKAQLLSRVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKEN
DPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLNLDNAPLLQSIHQLDFVQMKVS
SPVPAPPILQLEECCTRNNSATLSWKQPPLSTVQVEGYILELDDGNGGQFREVYVGKETM
CTVDGLHFNSTYSARVKAFNKSGVSPYSKTLVLQTSEDTQSEEQTLPFPVPLERSQLRRM
SPFSSTLNLQPSFSGRSYFELRSSAHQLSLHSSLQSLNSAGCNFDTQGSPYSQLVDIKKM
VAVAWFSFDPSSAHADIIFSNDNLTVTCNSYDDRVVLGKTGFSKGLHYWELSIDRYDNHP
DPAFGVARLDVLKDAMLGKDDKAWAMYVDNNRSWFMHNNSHTNRTEGGITKGATVGVLLD
LTRRTLTFSINEDQQGPVAFENLEGLFFPAVSLNRNVQVTLHTGLPVPEFYASRSAMP
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggaagagatggaagaggagctgaaatgcccggtgtgcggctccttttaccgggagccc
atcatcctgccctgctcgcacaacctgtgccaggcggggggccgccgcgcctcgggctcg
gccgtctccgactatgactacctggacctggacaagatgagcctgtacagcgaggcggac
agcggctacggctcctacgggggcttcgccagcgctcccaccacgccgtgccagaagtcg
ccgaacggggtgcgcgtgttcccgccggccgcgccgcctcccccggccgcgctggcgccg
ccgccggggatgtgcgagcagtgcgacgtcttctactgcgacccgtgccgcctgcgctgc
cacccgccgcggggaccgctggccaagcaccgcctggtgccgccggcccagggccgcgtc
agccgccgcctcagcccccgcaagatctccacctgcaccgaccacgagctggagaaccac
agcatgtactgcgtacagtgcaagagccccgtctgctaccagtgcctggaggagggcaag
cactccagccacgaggtcaaggcgctgggagccatgtggaagctgcacaagagccagctg
tcccaggccctgaatggtttgtcagacagagccaaggaggcgaaggaattcctggtccag
ctccgcaacatggtgcagcaaatccaggagaacagtgtggagtttgaggcctgcctggtg
gcccagtgtgacgccctcatcgatgccctcaacaggaggaaagcccagctgctgtcccgg
gtcaacaaggagcacgagcacaagctgaaggtggtgagggaccagatctctcactgcacg
gtgaagctgcgccagaccacggggctgatggaatattgcctggaggtcatcaaggagaac
gaccccagcggcttcctgcagatctcagatgctctcatcaggagggtgcacctgaccgag
gatcagtgggggaaggggaccctgaccccccggatgaccacggacttcgacctgaacctg
gacaacgcccccctgctgcagtccatccaccagctggactttgtgcagatgaaagtctcc
tccccagtgccggccccacccatcctgcagctggaggagtgctgcacccgcaacaacagt
gccaccctgtcctggaagcagccccctctgtccacggtgcaggtggaaggatacatcctg
gagctggacgatggcaacggtggccagttcagggaggtgtatgtgggcaaggagaccatg
tgcacggtggatgggctgcacttcaacagcacctacagcgcccgggtcaaggctttcaac
aagtcaggagtcagcccctacagcaagaccctggtcctgcagacctcagaggacacgcag
tcagaagaacagaccctcccttttccagtgcctttggaaagatcgcagcttcgtagaatg
agtcctttctcctccacccttaatctacaacccagcttctcggggagatcctactttgag
ctaagatcttcggcccaccagctgagcttgcattcctccttacagtccctgaattcagcc
ggatgcaattttgacacacaaggatcgccttactcccaattagttgacattaaaaaaatg
gtggcagtcgcttggttttctttcgacccctcctccgcccacgccgacatcatcttttcc
aacgacaacctgaccgtcacctgcaacagctacgacgacagggtggtgctgggcaagacg
ggcttctccaaagggctgcactactgggagctgtccatcgaccgctacgacaaccacccc
gacccggccttcggcgtggcgcgcctcgacgtgctcaaggacgccatgctgggcaaggac
gacaaggcctgggccatgtacgtggacaacaaccgcagctggttcatgcacaacaactcc
cacaccaacagaaccgagggtgggatcaccaagggcgccacggtgggcgtgctgctggat
ctgaccaggaggactctgacattctccatcaacgaggaccagcaggggcccgtggccttc
gagaacctggaggggctgttcttccccgcggtcagcctcaacaggaacgtgcaggtgacg
ctgcacaccgggctgcccgtgcccgagttctacgcctcgcgctcggccatgccctga
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