Ficedula albicollis (collared flycatcher): 101811602
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Entry
101811602 CDS
T02815
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon, catalytic subunit
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03030
DNA replication
fab03410
Base excision repair
fab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101811602 (POLE)
03410 Base excision repair
101811602 (POLE)
03420 Nucleotide excision repair
101811602 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fab03032
]
101811602 (POLE)
03400 DNA repair and recombination proteins [BR:
fab03400
]
101811602 (POLE)
Enzymes [BR:
fab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101811602 (POLE)
DNA replication proteins [BR:
fab03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
101811602 (POLE)
DNA repair and recombination proteins [BR:
fab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
101811602 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
DNA_pol_B_exo1
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
101811602
NCBI-ProteinID:
XP_005055248
LinkDB
All DBs
Position
15:14761785..14796364
Genome browser
AA seq
2282 aa
AA seq
DB search
PRRPGGHRELADGAGSGRDDAPALSALKRLERAQRTDRLDALFGFERPAEPGERTGWLIN
MHPTEVLDEDRRSVSAVDYYFIQEDGSRFKVALPYQPYFYIATQKGCEREVSSFLSKKFQ
GKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVKVRKDISPAVRKNRERDQASD
VYTTMLSSALSGGSLSTDEEGASKKIANQMDNIVDMREYDVPYHVRLSIDLKIHVAHWYN
VRYRGSTSPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDADTDQIMMISYMVDGQGY
LITNREIVSENIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHIQETKPTIIVTYNGD
FFDWPFVEARATAHGINMYQEIGFQKDSQGEYKASPCIHMDCLRWVKRDSYLPVGSHNLK
AAAKAKLGYDPVELDPEEMCRMAMEEPQTLATYSVSDAVATYYMYMKYVHPFIFALCTII
PMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDGHVLDSETYVGGHVE
ALESGVFRSDIPCRFKMNPAAFDFLVQHVEKTLQHAIEEEEGLPLDQVTNFQEVCDEIKA
KLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQR
RMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPDGPPRAFHELSREEQAKYEKKRLAD
YCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVET
GDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQ
ARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNIKKPKVTISYPGAMLNILVKEGF
TNDQYQELQDPASLTYITRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSL
AELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKVADYWLDVLYSKAANMP
DSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPE
GSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQDFNIRAILDWDYYIERLGSTIQKII
TIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFVSEGKKQVLASRPVEGAP
SSQVGDIEDFGAVKIPQPLVPVANKRKRIPAAEESQQLSQDLELSQSWREILGPPPPLGT
TKEEHLVWLRFHQKKWELQARQRKERRKRRRLEGDGVGAGGGAVRDALSKGLGSYLRQRA
RSILDLPWQVVQIAETGQPGLFRLWAVIGSDLHCIKLSIPRVFYVNQRIPKPEEGTAYRK
VNRILPRSNLVYNLYEYSVPEDMYQEHVNEINADLSAPDIEGVYETQVPLLFRALIHLGC
VCMVSRQLVRHLAGREAETFNIEHLEMRSLAQFTYLEPGSIRHIYLYHSCQGSKALLGLF
IPSQRKAAVFVLDKVRSNQMPNLTTLFSVERAALLEKVGEELLPPDKHTFEVRAETDPKA
IYRCVQRLLLGYKDERRGPTLVAVQSNWDLKRLASGMPTLEEFPLVPIRLVDDISYSVLD
WQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGSDLFFSRHLCRHNHL
LWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLELDIQSLAVNTVLQSH
HVNDMEGGSSMSISFDVIQQASLEDMVTGNQAANIPASYDETALCSNAFRILKSMVVSWV
KEITQYHNIYADNQVIHFYRWLRSPSSLLYDPALHRMLHNMMKKLFLQLVAEFKRLGSSV
VYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSRCWEFLLWMDPANYG
GIRGKVDSRIHYGEKDTSKRQALEEESEEEEEEEVTREEEEEEGEPDVEELLENSWNIAQ
FLPQAGSCQTYFLMIVSAYIVAVYHSMKGELRRNTPGSTPIKRRSTSQVSQEALGELRAM
PGMITFSQDYVANELTQSFFTITQKIQKKMAGSRNATEPSDMFPVLPGSYLPLNNPALEF
IKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSEAAQFRDPCRSYVLSEVICRNCNFC
RDLDLCKDPSLSQDRLVLPGWHCPNCHVQYNIDAIEMALVEALQKKLMAFVLQDLVCRKC
RAVKETHMPVYCSCAGDFTLTISSQAFMDHVSVFQNIARHYGMAYLLETIEWLLHTNLQL
QQ
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
ccccggcggccaggcgggcaccgggagctggcggacggcgccgggtccggccgtgacgat
gcccccgcgctgtctgcactcaagcgcctggagcgggcgcagcgcacggaccggctggac
gcgctgttcggcttcgagcggcccgcggagcccggtgagcggacgggctggctcatcaac
atgcacccgacggaggtgctggatgaggaccggcggtcagtgagtgcagtggactactac
ttcatccaggaggatggaagccgcttcaaggtggccctaccctaccagccctacttctac
attgccacccagaagggctgtgagcgggaagtgtcttccttcctctccaagaagttccaa
gggaagattgcaaagctggaaactgtccccaaagaggacttggacctgccaaaccacttg
gtgggcctgaagaggaactacatcaagctgtccttcaacacggtggaggacttggtgaag
gtgcggaaggatatctctcctgctgtgaggaaaaacagggagcgggaccaggcgagtgat
gtctacacgaccatgctgtcgagtgctctgagtgggggcagtctaagcacagatgaggaa
ggagcctccaaaaaaattgccaatcagatggacaacattgtggatatgcgggagtatgat
gtgccctaccatgttcgcctttccatcgacctgaagatccacgtggctcactggtacaac
gtgcgataccggggcagcacctccccccccgagatcacgcgccgggatgaccttgtggag
cggccggatcctgttgttcttgcctttgatattgaaacaaccaaactccctttgaagttt
cctgatgcagacacagaccagatcatgatgatctcctacatggttgatggacagggctac
ctgatcacaaacagggagattgtctcagagaacattgaagactttgagtttactcccaag
ccggagtatgagggtccattttgtgtctttaatgaaccagatgaggctcatttaatccag
agatggtttgaacacatccaggagaccaaacccaccatcattgtcacatacaatggagac
ttctttgactggccctttgtggaagcaagagccacagctcatggaattaatatgtatcag
gaaattgggtttcagaaggatagccagggagagtacaaagcatccccgtgcatccacatg
gactgtctgaggtgggtgaagagagacagttacctcccagtgggaagtcacaacctgaaa
gcagcagctaaagcaaaactaggttatgatccggtggagctggaccctgaggagatgtgc
cggatggccatggaggagcctcagaccctggccacctactcagtgtccgatgccgttgct
acttactacatgtatatgaagtacgtgcatcccttcatttttgccttgtgtaccatcatt
cccatggagcctgatgaggtgttaagaaaaggatctgggacactgtgcgaggcactgctg
atggttcaggcctaccatgccaacatcatcttccccaacaagcaggagcaagaattcaac
aaacttaccgaagatggacatgtgctggactctgagacctatgtgggaggccacgtggaa
gcactggaatctggggtcttccgcagtgacattccctgccgcttcaaaatgaatcctgct
gccttcgacttcctggtgcagcacgtggagaagaccctgcaacacgccatcgaggaagag
gagggtctgcccttggatcaggtcaccaacttccaggaggtttgtgatgaaatcaaggcc
aaactgaattccctgaaggatgttcccaacagaattgagtgtcctcttatctatcatctg
gatgtgggggccatgtaccccaacatcattctgaccaataggttgcagccctcggccatg
gtcgatgaggccacatgcgctgcctgtgacttcaacaagccgggtgccaactgtcagcgc
cggatgacgtggcagtggagaggagaattcatgcctgccagccgcagcgagtatcaccgc
atccagcagcagctggagtcggagaagttccctcccttgttccctgatggaccaccccgt
gccttccatgagctctcccgggaagagcaagccaagtacgagaagaagcgcctggcagat
tactgccgcaaggcgtacaagaagatccatgtcaccaaggtggaggagcgagtcaccacc
atctgccaacgagaaaactctttttacgtggacacggtgcgagcattccgggaccgccga
tacgagttcaagggtctgcacaaggtgtggaagaagaagctctctgcagcagtggagaca
ggagatgcctctgaagtgaagcgctgcaagaacatggagatcctgtatgactccctgcag
ctggcccacaagtgcatcctcaactctttctacggatatgtcatgcggaaaggagctcgc
tggtactccatggaaatggctggcattgtctgcttcacgggggcaaatatcatcacccaa
gccagagagctgattgagcagattgggagacctctagaactggatactgatgggatttgg
tgtgtccttcccaatagcttcccagagaacttcgtcatcaagtcaaccaatatcaagaag
ccaaaagtaaccatctcttacccaggtgccatgctgaacatcctggtgaaggagggcttc
acaaatgaccagtaccaggaactgcaggatccagcctcactcacctacatcacacgctca
gagaacagcatcttttttgaagtggatggtccgtacctggccatgatccttccagcctcc
aaagaggagggcaaaaagctgaagaaaaggtatgccgtgttcaacgaggatgggtccctg
gctgagctgaaggggtttgaggtgaaacgccggggagaactgcagctggtgaagatattc
cagtcatctgtgtttgaagcctttctgaaaggcagcaccctggaggaggtctatgcttct
gtggccaaggtggctgattattggctggatgtgctctacagcaaggctgccaacatgcct
gattcagagctgtttgagctcatctcagagaaccggtccatgtcacgcaaactggaggac
tacggggagcagaagtccacctccatcagcactgccaagcgcctggcagagtttttgggg
gaccagatggtgaaggatgcagggctgagctgtcgcttcatcatttccaagaaaccagaa
gggtctccagtcaccgagagggccatccctcttgccatcttccaagccgagcccagtgtg
cgcaaacactacctccgaaaatggctgaagagcccctcgctgcaggacttcaacatccgt
gcgatcctggactgggactactacattgagagactgggcagcaccattcagaaaatcatc
accattcctgcagccctgcagcaggtaaagaacccagtgccacgggtccgacacccagac
tggcttcataagaagctcctggagaagaatgatgtgtacaaacagaaaaaaatcaatgag
ctctttgtttcagaaggcaagaaacaggttcttgccagccggcctgtggagggggcaccc
agctcacaggtgggtgatatagaggactttggggctgtcaagatccctcagccacttgtt
cccgttgcaaataagcggaagcgcatccctgcagcagaggaaagccaacagctgtcccag
gacctggagctgtcccagtcctggcgggagatcctgggaccgcctccaccccttggcacc
accaaggaagagcatctggtctggctgcgcttccaccagaagaagtgggagctgcaggct
cggcagcggaaggagcggcggaagaggcggcggctggagggcgatggagtgggggcaggc
ggaggagcagtccgtgatgctctctccaaagggctgggcagttacctgcgccagagagcg
cgcagcatcctggacttaccctggcaggtggtgcagatcgctgagactggccagcctggg
ctgttccggctgtgggcagtgatagggagtgacctgcactgcatcaagctgagcatcccc
cgtgtcttctatgtcaaccagcgcatcccaaagcctgaggagggaacagcctacaggaag
gtaaacaggatcctgccccgctcaaatttagtttataacttgtatgaatactctgtccct
gaagacatgtaccaagagcacgttaacgaaatcaatgcagacctttctgctccagacatc
gagggagtgtatgagacacaggtgccactgctcttccgtgccctcatccacctgggctgc
gtgtgcatggtcagcagacagctcgtccggcacctggcagggcgagaggctgaaaccttc
aacattgagcacctggagatgcgctcactggcccagttcacttacctggagccaggaagc
attcgccacatctacctgtaccacagctgccagggcagcaaggcactcctgggcctcttc
atcccctcacagcgcaaggctgctgtctttgtgctggacaaggtacggagcaaccagatg
ccaaacctcaccaccttgttctcagtggagcgtgcggctctgctggaaaaggtgggcgag
gagctgttgcccccagacaaacacaccttcgaggtgcgcgctgagaccgaccccaaggcc
atttacagatgtgttcagcggctgctcttgggctacaaggacgagcgccggggccccacg
ttggtggctgtgcagtccaactgggacctgaaacggctggcgagcgggatgcccaccctt
gaggagttccccttggtccccatccggctggtagatgacattagctactcggtcctggac
tggcagcgccacgctgcccgccgcatgattcgccactacctcaacctagacacctgcctc
tcccaggcttttgagatgagcaggtactaccacatccccattgggaacctccctgatgac
atctccaccttcggctctgacctgttcttctcacgccacctttgtcgtcacaaccacctg
ctgtggctgtcccccacggcccgccccgacctggggggcaaggaggccgatgacaaccgc
ctggtcatggagtttgatgagagagcctcagttgagatcaacaaccctggctgctactcc
acagtgtgtctggagttggacatccagagcctggctgtgaacaccgtgttgcagtcccac
cacgtgaatgacatggaaggaggctccagcatgagcattagcttcgatgtgattcagcag
gcatccttggaggacatggtgacagggaaccaagctgccaacatcccagccagctatgat
gagactgccctctgctccaacgctttcaggattttgaagagcatggtggtgagctgggtg
aaggagattacgcagtaccacaacatctatgcagacaaccaggtcattcacttttaccgc
tggctccgctctccttcctccctgctctatgacccagcactgcaccgcatgctccacaac
atgatgaagaagcttttcctgcagctggtggccgagttcaagcgcctgggctcctctgtg
gtctacgccaacttcaaccgcatcatcctgtgcaccaagaagcggcgcattgaggatgcc
atcagctacatggagtacatcatcaacagcatccactccaaggagatcttccattctctg
accatctcattctcccgctgctgggagttcctgctctggatggacccagcaaattatgga
ggtatcaggggaaaagtggattctcgcatccactatggggagaaggacaccagcaagagg
caggcattggaggaggagagcgaggaagaggaggaggaggaggtgacgagggaagaagaa
gaggaagaaggggagccagatgtggaggagctgttggaaaacagctggaacattgcgcag
ttcctgccccaggccggctcctgccagacctacttcttgatgatcgtgtcagcctacatc
gtggctgtgtaccacagcatgaagggggaactgcggcgtaacacccctgggagcaccccc
atcaagaggaggagcaccagccaggtgtcccaggaggctctgggggagctaagggccatg
cctggcatgatcaccttctcacaagattatgtggccaatgagctcacccaaagtttcttc
accatcacccagaagatccagaagaagatggccggttcccggaatgctacagagccctca
gacatgttcccagtcctgcctggctcctacctgccactcaacaacccagctctggagttc
atcaaatacgtttgcaaggtcctctccctggatgccaacataaccaaccaggtgaacaaa
ctacgccgggacctgctgcgcctcattgaggtgggcgagttctcagaagcagcgcagttt
cgggacccttgccgctcctatgtgctttctgaagtcatctgcaggaactgcaacttctgc
agggacctggacctgtgcaaggacccttccctttcccaggacaggttggtgctgcccggc
tggcactgccccaactgccatgtgcagtacaacatcgatgccattgagatggcgctggtg
gaagccctgcagaagaagctgatggccttcgtgctccaggacctggtgtgcagaaagtgt
cgtgccgtgaaggagacgcacatgcctgtgtactgcagctgtgctggagacttcaccctc
accatctcctcccaggccttcatggaccatgtcagtgtcttccagaacatcgcccggcac
tatggcatggcctacctgctggaaaccattgaatggctgctgcacactaacctccagctc
cagcagtga
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integrated database retrieval system
