Ficedula albicollis (collared flycatcher): 101815691
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Entry
101815691 CDS
T02815
Symbol
TRIM13
Name
(RefSeq) tripartite motif containing 13
KO
K12003
tripartite motif-containing protein 13 [EC:
2.3.2.27
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101815691 (TRIM13)
Enzymes [BR:
fab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101815691 (TRIM13)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101815691 (TRIM13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
Herpes_IE2_3
U-box
zf-Nse
Motif
Other DBs
NCBI-GeneID:
101815691
NCBI-ProteinID:
XP_005037966
LinkDB
All DBs
Position
1:66195074..66209451
Genome browser
AA seq
409 aa
AA seq
DB search
MMELLEEDLTCPICCSLFDDPRVLPCSHNFCRKCLEGILEGNVRNVLWRPSPFKCPTCRK
ETPVAGVNSLQVNYSLKGIVEKYNKIKVTPKMPVCKVHSGQPLNIFCRTDMQLICGVCAT
RGDHTKHVFCSIEEAYSQEKRAFETLFQGFETWRCGDALSRLDTLETSKRKALQMLTKDS
DKVKEFFEKLQHTLEQKRNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAF
KDVSEPIIFLQQMQEFREKIKVLKETPLPCSTVDISPTMKSFDTSQWNGIKLVDVDKLSL
PQESNTFKFKIPSVFSRRFIVNSLIFLLILAVTRMSFVESVIDNLQCWKSQFLTISLSYL
ADTVEIADHAVFYWEQMTDGASLLREKCKNYTLVVLDNVAQFVCKYKLL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctcctagaggaagatctgacctgtcccatttgctgcagcctgtttgatgat
cctcgtgtcctgccctgttcgcacaatttctgcagaaagtgtctggaaggaattcttgag
ggaaatgtgcggaatgtgctttggaggccatcccctttcaagtgccctacatgcaggaag
gagactcctgtcgctggagtcaacagcttgcaggtcaactattccctgaaaggtatcgtg
gagaagtacaacaaaatcaaagtaactccaaaaatgcccgtgtgcaaagtgcacagcggg
caaccccttaacattttttgccggacagacatgcagctgatctgtggggtttgtgccacc
cgtggtgaccacacaaagcatgttttctgttccattgaagaagcttattcccaggagaag
cgggcttttgaaaccttgtttcagggctttgaaacttggcgttgtggagatgccctctca
cggctggataccttagagaccagtaagaggaaagctctgcagatgctgacaaaagattct
gacaaagtgaaggagttctttgagaagctgcagcacactctggagcagaagcgaaatgag
attctgtctgactttgagaccatgaagcttgcagtgatgcaggcctacgacccggaaatc
aataaactgaacacgattctgcaagagcagcggatggcttttaacattgcagaggccttc
aaagatgtgtctgaacccattatatttctgcaacagatgcaggagttcagggaaaaaatc
aaggtgctcaaagaaacccctttaccttgttccacagtggacatcagtcccacaatgaag
agctttgataccagccagtggaatggaataaaacttgttgatgtggacaaactttccttg
cctcaggaaagcaacactttcaaattcaagattccctcagtcttttcgcgcagatttata
gtgaactctcttattttcttgctcattcttgctgtcaccagaatgtcctttgtggagtca
gtcattgacaatctccagtgctggaaatcccagttccttacaattagcttgtcctatctg
gcagataccgtggagatagcagatcatgcagtcttttactgggaacagatgacagatgga
gcttcacttttaagagaaaagtgtaaaaactatacgttggttgtactggataacgtcgca
cagtttgtgtgcaaatataaactgttgtga
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