Ficedula albicollis (collared flycatcher): 101815955
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Entry
101815955 CDS
T02815
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fab03021
]
101815955 (AFF3)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
101815955 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
BRD4_CDT
Motif
Other DBs
NCBI-GeneID:
101815955
NCBI-ProteinID:
XP_016161613
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All DBs
Position
1:32568415..32896305
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AA seq
1125 aa
AA seq
DB search
MDSFDLALLQEWDLDSLCVYEPDRNVLRRKEWERRNQEAQQDNGAFNTSYSLFSEPYKTN
KGDELSNRIQNTLGNYDEMKDLLTDRSNQSHLVGVPKPGVPQTSLPKADEHLIADSRPPP
PPPISSTTSATPAPLAAQQSKSTTMGWQKAGHSATSDGQQRAGKHGHRSLESHKGDFKLA
SQKSSLEKLKRYASSPTSSSSSSSSSSSSSSSSSSNSAQQSSLRATLGDNISRVQQPAKL
SCSSEGGTQVQERPAKHGGGHCVQNFPPSLASKPSLGQQKPTAYVRPMDGLDQAPDESPK
LKLPAETTKSYRGVPSSKPDSARTKSKITKFSIPKQEEDSGTGDNSCIEEILREMTHSWP
PPLSAIHTPGKAEQSKFPFPNKESQQGSTGHSNTRKSDVEPKSPEKSATHSSMLEDDLKL
SSDEEENDQQAAQRSALRVLSDSLVVPQPNARASGLSSKGSSSSSSSESETSSESDSESE
SSSSESDGSKPSHYSSPEPEPPSSNKWQLDKWLNKVTPHKAPILSHHDGPALEAHPYYGR
AKVERQEGQKAPAEAPAEHRRHRREPRSAAAGEKRRARGPSKTAPKSKEFIETESSSSSS
SSDSGSESEREERPLPKAPAAASAFGSINARTSSEIAKELEEQFYTLVPFGRNELLSPLK
DSDEVKSLWVNIDLALLSRIPERLPEEPLAMSAGANQAASFPQGSSAEPPAEKGLPKSRR
KRKCENEEECRDIKKTHLERESSSRLAASAPSITTANHCNMNENSLAIPINKNEKMLRSP
VSPLSDASKHKYSNDDLTSSSRPNGSSLLPSISSSKKHKGEIQSQPHPGDFNKAIHINSE
NVLLCNKPQFQTEPWSPLSTTPRDCRRTKLVFDDIPRNADYFMQEAKRKKHKADAMVEKF
GKALNYAEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAMRLKTHSGPNATPEDK
QLAALCYRCLALLYWRMFRLKRDHAVKYSKALIEYFKNSSKAAQNPSPWGASGKSTGTPS
PMSPSPSPVSSVGSQGSTGAPSPSPIITIPQRIHQMAANHVSITNSILHSYDYWEMADNL
AKENRDFFNDLDALMGPITLHSSMEHLVQYTQQGLHWVRNSAHLS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacttagctctccttcaggagtgggacctggactctctgtgtgtgtat
gagccagacagaaacgtgctgcggaggaaagaatgggagaggagaaatcaggaggcccag
caggacaatggcgcgtttaacacgagctattccctcttcagtgaaccatacaagactaac
aagggggatgagctttccaatcgcatccagaacacgttgggcaactatgatgaaatgaaa
gacttgttgacggaccggtccaaccagagccatctcgttggggtcccgaaacctggggtt
cctcagacatccctccccaaggctgatgagcatctcatcgcagactcgagaccaccacct
cctcctcctatttccagcaccacttctgccacaccagcacccctagctgcgcagcagagc
aaaagtaccaccatgggctggcagaaggctgggcacagtgccacttcagatggccagcag
agagcgggcaagcacggacaccggtcgctggagtcacacaagggtgacttcaaactggcc
agccaaaaatccagtttggagaaactaaaacgctatgcatcgagtcccacctcctcctcc
tcctcttcctcctcctcctcttcttcctcctcctcctcctcctccaatagtgcccagcaa
agctcgctgcgagccacattaggagacaacatcagtagagtccagcagccagcgaagctc
agttgtagctcagaaggaggaactcaagtccaagagaggccagcaaagcatggtggggga
cactgtgtccaaaacttcccaccctctcttgcttcaaagcccagtctgggtcagcagaag
ccaacagcttatgtaaggccgatggacggtctagaccaggctcctgatgagtctccaaag
ctgaagttaccagcagagacgaccaagtcctatcggggagtgccttccagcaagcctgat
tcggccaggaccaagtcaaagatcaccaagttcagcattcctaagcaagaagaagacagt
ggaacaggagataacagctgcattgaagaaatattgcgggagatgacccattcatggcct
ccaccactgtcagctattcacacaccaggaaaggcagaacaaagcaagtttcccttccca
aacaaggagtcacagcagggatctacaggacacagcaatacaaggaaaagtgatgtagag
ccaaagagcccagagaaaagcgccacccattcatcaatgctagaagatgacctcaagtta
agcagtgatgaagaggagaatgaccagcaggcagcacagagatctgctctccgcgttcta
tctgacagcctggtggtgccgcagcccaatgcccgagcctcgggactctccagcaagggg
tcgagcagcagcagctccagtgaatccgagaccagctcagagtctgactcagagagcgaa
agcagctccagtgagagcgacggcagcaagccctcgcattactccagcccagagcctgag
ccgccctcgtccaacaagtggcagctggacaagtggctgaacaaagtcacccctcacaaa
gcacccatcctaagccaccacgatggcccggcgctggaagcccatccctactacggccgc
gcgaaggtagagcggcaggaaggacagaaggccccggctgaggccccggccgagcaccgc
aggcaccgccgggagccccgctcggccgcagctggtgagaagcgccgggcccgagggccg
agcaaaacggcgcccaaatccaaggagttcatcgagaccgagtcttcatcctcatcgtcc
tcctccgactcaggctctgagtcggagcgggaggagcgcccgctgcccaaggcgccagcg
gcagccagtgcctttggctctattaatgccaggactagtagtgaaatagcaaaggagctg
gaggaacagttttacaccctggttcctttcggtaggaatgagctcctgtctcctctgaaa
gacagtgatgaggtaaagtcgctgtgggtcaacattgacttggctcttttgtccaggatt
ccagagcgtttgcccgaagaaccgctggccatgagcgccggagcaaaccaggcggccagc
ttcccgcagggtagtagtgctgaaccccccgcagagaagggtttaccgaaatctagaagg
aaacgcaagtgcgagaatgaggaagagtgcagagacatcaagaagactcacttagagcga
gagagttcttcacgattagctgcctctgccccaagtatcacaacagcaaatcactgcaat
atgaatgaaaatagcttggcaataccaataaataaaaatgagaaaatgcttcggtcaccc
gtctctcctctctctgatgcatcaaaacacaaatattccaacgatgatttaacttcctcc
agcagacctaatggcagcagtctattaccttcaatctcctccagcaaaaaacataagggt
gaaatccagtcacagccacatcctggagacttcaataaagcaattcacatcaattcagaa
aatgttcttctctgcaataagccacagttccaaacagagccttggtcacctctgtccacc
acacccagggactgcagaagaacaaagcttgtcttcgatgatataccacgcaatgcagat
tactttatgcaggaagctaaacggaagaagcataaagcagatgcaatggtggagaagttt
ggaaaggcactgaattatgcagaagcagcactatcatttattgagtgtggaaatgcaatg
gaacaaggcccaatggaatctaaatccccttataccatgtattcagaaacagttgaactc
atcaggtatgcaatgagactaaaaacccactcaggccccaatgccacgccagaagacaaa
cagctggcagcattatgttaccgctgcctggcccttctgtactggaggatgttccgactc
aagagagaccacgcagtcaagtattcaaaagcacttattgagtatttcaagaattcctca
aaagctgcccaaaacccatctccttggggtgccagtggaaagagcacaggaactccatca
cctatgtcccctagcccttctccagtcagttctgtaggatcccaggggagcacgggggct
ccttccccatctcctatcatcaccatcccgcagcgcattcatcagatggctgccaaccac
gtcagcatcaccaacagcatcctgcacagctatgactactgggagatggctgacaacctg
gccaaggaaaacagagatttttttaacgacttggacgcattgatgggacctatcaccttg
cacagcagtatggagcatttggttcaatacactcaacaaggacttcactgggtgcggaat
agcgctcacttgtcataa
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