Ficedula albicollis (collared flycatcher): 101818502
Help
Entry
101818502 CDS
T02815
Symbol
COL6A6
Name
(RefSeq) collagen type VI alpha 6 chain
KO
K06238
collagen type VI alpha
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04510
Focal adhesion
fab04512
ECM-receptor interaction
fab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101818502 (COL6A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101818502 (COL6A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101818502 (COL6A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fab04147
]
101818502 (COL6A6)
00536 Glycosaminoglycan binding proteins [BR:
fab00536
]
101818502 (COL6A6)
Exosome [BR:
fab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101818502 (COL6A6)
Glycosaminoglycan binding proteins [BR:
fab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101818502 (COL6A6)
Hyaluronan
Extracellular matrix or blood plasma proteins
101818502 (COL6A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
Kunitz_BPTI
Motif
Other DBs
NCBI-GeneID:
101818502
NCBI-ProteinID:
XP_005041171
LinkDB
All DBs
Position
2:44275466..44314787
Genome browser
AA seq
1176 aa
AA seq
DB search
MQANRGYIKPCEQEINAFHHPPHWCKCSIDLSTAIDISRSMQPVPTMLVKQRLKAFIPRL
LLQMKSLPNTSCNAPVNIGFKFQVLAQNKQLIFDSGFEDYNDEIIQKFLDAQTTVDTYTN
ADFLQALEENFFNVTSAKVKVLLVFSDGLDDSLEDLKKTADSLRFKGLDALLLVGLDNTQ
NLTEFWEIEFGRGFGYNEPLSVGFADIANILQRNLDTVAERKCCKVICKCLGENGDCGVR
GSPGRKGSIGYRGSPGHPGEEGGIGERGPAGFSGTQGERGCPGVRGHKGARGYRGSQGEH
GESGFDSTDGEQGECGFPGPSGEKGSRGKWGRKGPRGEPGERGESGLRGDHGDPGADNNV
TGPKGEKGNLAPQGDPGPQGLQGQQGDAGLDGAAGRRGPPGIKGEQGDLGETGNSGETGL
PGPQGPRGPQGIRGPPGPQGMPGPLGSLGTPGSSGSVGKLGARGAEGEPGDPGEKGLAGP
PGQRGIPGIDGRDIYGPEGSKGAKGESGFIGYPGPEGEEGDQGIPGAEGPKGIRGRRGNS
GTPGSSGDPGDQGPSGPKGAKGPVGTILMEPCELVNFTRKNCPCSSDTCPAYPTEVLFAL
DMSHDVTPTAFERMRNIVMLLLKTIKISESNCPTGARVSVVSFNTNTHYLIRFSEFQKNN
LLLQAVQSIPLERSSGKRNIGAAMRFVARNVFKRVRQGILTRKFALFFANGPSQDDVAIS
TAVLELNALDITPVVIAFSEVPNVRRAFSIDDTRRFQLFIWERQQDENLEGITYCTLCFD
KCNPRTNCEVPFSPLVQMDMDITYIMESSRSISSEEFQRAKDFVSNMLDQFVISSQPNES
YGGIRVALVQQAPKGFLPDRNQTPVALEFDLVTYSNKDLMKKHIQESVHQLEGPSAIASA
LQWTVENVFFKAPRQRKHRVIFTIVGSETSSWDRERLREISLGAKCQGFTLFTLALGSDV
SHNELIELSSSPTDQHSLTLGRVFAPEMVYAQRFSRAFLNLLQQEMNRYPSPELQEECEN
LDRGDIQQEASMTERITFPEMAERGSHQVLEDTEKNESRVMKSMEEKAKEPVYTMPEMRD
YYEENKYFTEENAKRKKPQECGKAQEKNKKNLETTVETRDACDLVQDSGECQNYILKWYY
DKEQKMCGQFWYGGCGGNKNRFETKEECGFLCIESS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgaatcgtggttatataaagccgtgtgaacaggaaataaatgcctttcaccat
ccaccacattggtgtaaatgcagcattgatctttctacagcaattgatatttcaaggagc
atgcagccagtacccacaatgcttgtgaaacagagactgaaagcattcatccccagactt
ctactccagatgaaatcattgccaaataccagttgtaatgctccagtcaacattgggttc
aagttccaagtattggcacagaacaaacaattaatctttgactctggttttgaagactat
aatgatgagatcatccagaagttcttagatgcacagaccactgtggacacctacactaat
gcagactttttgcaggcacttgaggagaacttctttaatgtgacctctgctaaagttaag
gttctattagtattttcagatggactggatgattcactggaagacctgaagaaaacagca
gactcacttcgctttaaaggtcttgatgcacttctattggttggtttggacaatacacag
aacttgactgaattttgggaaatagagtttggcagagggtttggatacaatgagcctctg
agtgttgggtttgcagatattgcaaacatcttgcagagaaaccttgataccgttgcagaa
agaaaatgttgtaaggttatttgtaagtgtctaggagaaaatggtgattgcggtgtccgg
ggaagtcctggaaggaagggaagtataggttacagaggatctcctggccatcctggtgag
gaaggtgggattggggagagaggcccagctggtttcagtgggactcaaggagaaagggga
tgtccaggcgtcagaggccataagggtgccagaggctatagaggaagtcagggtgagcat
ggtgagagtggatttgatagcactgatggagagcagggagaatgtggatttcctggacct
tctggagagaaaggcagcagaggaaaatggggcagaaaaggccccagaggagaaccaggt
gaacgaggagaatctggtctaagaggagatcatggagatcctggggctgacaataatgtt
actggtcctaagggtgaaaagggaaacctagcaccacagggagacccaggcccacaagga
ctccaaggacagcagggtgatgctggcctagatggtgcagcaggtcgaagaggccctcca
ggtataaagggtgagcaaggagatctaggagaaacaggtaactcaggagaaactggtctt
ccaggcccacagggcccaagaggaccacaagggatcagaggacctccaggaccacaaggc
atgccaggccctctgggtagtctggggacacctggttcatctggctctgttggaaaacta
ggtgcaagaggagcagagggtgaacctggtgaccctggagagaagggcttagctggacca
cctggacagagaggcattccaggcattgatggcagagatatctatggtcctgaaggaagc
aaaggagcaaagggagaatctggattcataggatatcctggtccagagggagaagaagga
gatcagggcattccaggagctgaaggacccaaaggaattaggggtagaagaggtaattct
ggcacaccaggttcctcgggagatccaggtgaccaagggccatcaggacccaagggtgcc
aaggggccagtgggcaccattttaatggaaccttgtgaacttgtaaattttacccgaaaa
aactgcccgtgctcatcagacacatgtccagcttatccaactgaagttctttttgccttg
gatatgtctcatgatgttacacccactgcatttgaaagaatgaggaacattgttatgttg
ttgctgaagaccattaagatcagtgaaagcaattgcccaacaggggctcgtgtctctgtc
gtttctttcaataccaacacgcactacctcatccgattctctgaattccaaaaaaacaac
ttgctgctacaagcagtccagagcatcccactagagagatccagtggaaaacgaaatatt
ggggcagccatgagatttgttgcaagaaatgtcttcaaacgtgttcgtcagggcatcctc
accagaaaatttgccctattttttgctaatggtccatcgcaggatgatgttgccatcagc
acagctgtgcttgagttgaatgccttggatatcaccccagtggtcattgccttcagtgaa
gtgccaaatgtcagacgtgccttctctattgatgacacaagaagatttcaattatttatt
tgggaaagacaacaagatgaaaatttggagggcatcacatattgtacactttgctttgat
aaatgcaacccaagaaccaactgtgaggtgcctttttctcccctggttcagatggatatg
gatataacttacatcatggagagctctcgcagcatttccagtgaagagtttcagagagcc
aaagactttgtgagcaacatgttggatcagtttgtcatttcctcacagccaaatgaatca
tatggaggcatcagagtggcactggtgcagcaggctcccaagggcttcctgcctgacaga
aaccagacaccagtggccttggagtttgacctagttacatacagcaataaagatttgatg
aagaaacacatccaagagtctgttcaccagctagaaggaccatcagccattgcttctgct
ctgcagtggacagttgaaaatgtgttctttaaagctcccagacaaagaaaacacagggtc
atatttacaatagttggaagcgaaacaagctcatgggacagagaaaggctgagagagatt
tcactcggagccaagtgccaaggattcaccttgttcactcttgcacttggcagcgatgtg
agtcacaatgagctgatagagctgtccagctcccccacagaccagcactcgctgacactg
ggcagggttttcgcaccagagatggtgtatgctcagaggtttagccgggcattcctaaat
ctcctacaacaagaaatgaaccgttatccttcacctgaacttcaagaagagtgtgaaaac
ttagaccggggagacatacaacaggaagcatccatgactgaaaggataacttttcctgaa
atggctgaaaggggttctcatcaagttttagaagacacggaaaaaaatgaaagtagagtc
atgaagagtatggaagagaaggccaaagaacctgtatacacaatgccagaaatgagagat
tattatgaggagaataagtatttcacagaggaaaatgctaaaaggaaaaagcctcaagag
tgtggaaaagctcaggaaaagaacaagaaaaacttagagacaacagtggaaactagagat
gcatgtgaccttgttcaagatagtggagaatgtcagaattacattttgaagtggtactac
gacaaagagcagaaaatgtgtggtcagttctggtatgggggctgtggaggcaataaaaat
agatttgaaacaaaagaagaatgtggattcttgtgtatagagtcctcctaa
DBGET
integrated database retrieval system
