Ficedula albicollis (collared flycatcher): 101818595
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Entry
101818595 CDS
T02815
Symbol
JMJD1C
Name
(RefSeq) jumonji domain containing 1C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fab03036
]
101818595 (JMJD1C)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
101818595 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
C1_2
FYVE
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
101818595
NCBI-ProteinID:
XP_005048108
LinkDB
All DBs
Position
6:5329822..5510167
Genome browser
AA seq
2311 aa
AA seq
DB search
MVVMNDQVLEPQNVDPSMVQMTFLDDVVHSLLKGENIGITSRRRSRSNQNSNTVHGHYTR
AQANSPRPAMNSQTAAPRQNSHQQQRNTRPNKRKGSDSSMPDEEKIKDERYDYIGRGENP
KTKNKHFLNKRRKPEQDEKKISMKRLRTDNISDYSESSDSEISNKRITDSSSEQNSENEL
KSKNSSKINGEGKSQTTEGVEQTLTDRQSPWDELQQDKNHEETEKLKSSVMDHQEKSSLH
AAEQPTLYEQNAKDPPVQECNTEKHHTMELKNEQFLPRSPTPKCVVDVTNKNNSEKENQD
NAASTFGLQTVQKIESHSSDLKQQFANANFLEARKQEADRSWVNSVGKTDLVQPGVVKPL
PVNEHLNSEKVQYGSFMSLLNVASLAEESKLRKQSPVPDSVKSKSSASVDHPKTKSPDAK
PKFTQSSDTVKSKVSSQNSHTTGITRSASKTDHDLPRSSFHPVPARVSALEATKSPLIID
KNEHFTVYRDPTLIGQETGTNHITPYLHQHNYPLHSSSHRSCLNPNAHHPALTGSSHLLA
GSSAQAPLSAINTHPLSSASHHSVHHPHLLPAVLPGVPAASLLGAHPRLETAHASSLSHL
ALAHQQQQQMLQHQSPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHP
ETAVNAEASLRRNTPSPWLHQPTPVTSADSLGLRSHVPVRPSSADPLRPLKLTTHSSPPL
SKSIVEHRKEELERKAFVEPLRSVTTAAVKSELEQSRTQAAKESHMHRHYADPMLNQLPR
PPQESGERLSKYKEEHRRILQESIEVAPFTAKIKALEGERENYSRVTSLSSSPKSHSVKY
DKDDERSVSELYKIKHSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSGVHVDKQTNCP
STAASPQAIPSYISSLSKPPPLIKHQPESEASASKIPEQLSQSVQSHSVNSFRSDSRSPT
QLSVSSSNTLRNMPALHRAPVFHPPVHQNLEKKESSYSSLSPPTLTPVQPVNAGGGKIQE
LQKPPTLVPEPKEAQTGYKGTSEQNLSEMWKSNNAPNNEKVDWHSERMSGKSQSATASVI
VRPPSSTKYENVPVMQSASKDRVSERSSAVTNLADCLKMAEARETGRIILPNMNSDSSRT
QYEKRFAAVSQGSIPRAVTPTTTIICSTKTDVTASAAMMTSMSSQGSSEVTYSVSSAVPC
PLLECTAPRVAGQAVAQPQECKVNPPAPVTSAAGSVAQPSSGFSTSTDFVHLKKHKAALA
AAQFKSSSTTETESNSVKNQTFSTSLSLDSAIVCNTINKANSVGTGQTSQTSQPNYHTKL
KKAWLTRHSEEDKNTNKKESSASSVSEIIKPCTVNLIASTSNDLQNNLDSKILADKFVKE
DKHPRRKGKRTYDSGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKKKGDAEEEMRP
NGVLSRSAKEKSKLKLQSGSNSTGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQ
KCRECRLIRSKKGEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEALSLWTH
ENYEDDELDLETSKYILDIIGDKFCQLVTSEKTAMSWVKKDAKIAWKRAVRGVREMCDAC
EATLFNIHWVCQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIP
GSVLTDLLDAMHNIREKFEIKSHCQCTTKQITQAGKLPAMNGVSQVLQNVLNHSNKISLC
MPESQQQNTPQKSETNGNTSPRSDVSTDSKLTPPESQSPLHWLADLAEQKAREEKKENKE
CPSGKHSKEGKDQDNLESPNCKSSPPASQNNEQGSTLRDLLTTTAGKLRLGSTDAGIAFA
PVYSTGTASGKSGRTMPNILDDIIASVVENKIPPNRAPKINVKSEIKDEPKDDKKCIQDD
CSKRYSDIQYSWICDKHVLWLRDHKNSNNWKLFKECWKQGRPVLVSGMHKKMNFSLWKAE
SISLDFGNQQADILNCKDSIISNTNVKEFWDGFEDVSKRQKVKNGETPLLKLKDWPSGED
FKTMMPARYEDLLKSLPLPEYCSPEGKLNLASHLPGFFVRPDLGPRLCSAYGVAATKDHD
IGTTNLHIEVSDVVNILVYVGIAKGNGVLSKSGVLKKLEEEDLDDLLRKRLKDSSELPGA
LWHIYAGKDADKIREFLQKIAKEQGLDVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCT
VIQFLGDAIILPAGALHQVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLSKEEINYDDK
LQVKNILYHAVKEMVRALKIHEGEVEDTDEN
NT seq
6936 nt
NT seq
+upstream
nt +downstream
nt
atggtggttatgaatgaccaggtgttagaacctcagaatgttgatccttctatggttcag
atgacctttctagatgatgttgttcactctttgttgaaaggtgaaaatattggcatcact
tcacgccggcggtctcgttccaaccagaacagcaacacagttcatggtcattatacacgt
gcacaagcaaatagtcccagaccagcaatgaattcccaaactgcagcaccaagacagaac
tctcaccagcaacagaggaatactcgaccaaataagaggaaaggctctgatagcagcatg
cctgatgaagagaagataaaggatgaaagatatgattatataggtcgaggagaaaatccc
aaaaccaaaaataaacactttcttaataaaagaagaaaacctgaacaggatgaaaaaaaa
ataagtatgaagagactgcggacagacaatatctcagattattctgagagcagtgactcg
gagatttcaaataaaagaataacagattcatcctcagagcaaaattcagaaaatgagtta
aaaagcaagaactcctcaaagataaatggagaaggaaaatcccaaactaccgaaggagtg
gaacagacactaacagatagacagtctccatgggatgaattacagcaggataaaaaccat
gaagagacagaaaaactaaagtcatcagtcatggatcatcaggaaaagtcttcactccat
gcagcggagcaaccaacactttatgagcagaatgccaaggatccacctgttcaagagtgt
aatacagaaaaacatcatactatggagttaaaaaatgagcagtttttacccagatctcct
actcctaagtgtgttgttgatgttactaataaaaacaactctgaaaaggagaatcaggat
aatgctgcaagtacctttggtttgcaaacagttcagaaaatagaatctcacagcagtgat
ttaaagcagcaatttgcaaatgcaaatttccttgaagcaagaaaacaggaagctgatcga
agttgggttaacagtgttggtaaaacggatttggtacaacctggggttgtaaaaccatta
ccagtgaatgaacacttaaactctgaaaaagtgcagtatggctcatttatgtctttgtta
aatgtagcttctctagcagaagaaagtaaactgcgtaaacaaagtccagtccccgattct
gtgaagtcaaaatctagtgcttcagttgatcatcctaaaacaaagtcacctgatgctaag
cctaaattcacccaatcttctgatactgtgaagtcaaaggttagttcccaaaacagccat
actactggaataacaaggtcagccagtaaaactgatcatgatttgcctaggtctagtttt
catccagttccagctagagttagtgctctagaagccactaagagtcctcttatcattgac
aagaatgaacatttcacagtatacagggaccccactctgattggacaagaaacaggaact
aatcacattacaccttacttgcatcagcataattatcctctgcattcctcatctcaccga
tcctgtttaaatccaaatgcacatcatcctgcattaactggttcatcccatctgctcgct
gggtcttcagctcaggctcccttgtctgctattaacactcaccctcttagtagtgcatct
caccattctgttcatcaccctcatctacttcctgcagtgttgcccggagtgcctgctgcc
tccttgctgggtgcccaccctcgactagagactgctcatgctagcagcttaagccatttg
gcattagcgcaccagcagcagcaacagatgttacaacaccagtctccacatcttctcgga
caagctcatccttctgcttcctataatcagctagggctttatccaattatttggcagtat
ccaaatggaacacatgcttactcaggacttggtctgccctcctccaaatgggtccaccca
gaaactgctgttaatgcggaggcttccttgagaaggaatactcccagcccctggttacac
cagcccaccccagtgacctcagctgacagccttggtttacggagtcacgttcctgtgcga
ccatccagcgcagatccccttcggcctctcaaactgacaacgcattccagcccaccgttg
tccaaaagcattgtagagcatcgcaaagaagaactggagaggaaagcttttgttgagcct
ctgcgttctgttaccactgcagcagtgaagagtgagctggagcagagcagaacgcaggca
gcaaaggagagccatatgcacagacattatgcagatccaatgttgaaccagctgccaagg
ccaccacaggagtctggggagcgactgagcaaatacaaagaagagcacagacgcatactc
caagaaagtattgaagttgctccatttacagctaaaataaaggcactggagggagagaga
gagaactactccagggtaacatctttatcttcaagtcccaaaagccattcagtgaaatat
gacaaagatgatgaacgctctgtgtcagaactgtataaaattaagcattcagttccacag
agtttgccacagagtaattatttcactaccttgtctaacagtgtagtaaatgaaccacca
agatcatacccgtcaaaggaagtttcaggtgtacatgttgataagcaaactaattgtcct
tcaacagcagctagtcctcaggctatcccctcctacatttcttccctttcaaaaccgcca
cctttaattaagcaccaaccagagagcgaagcctctgcaagcaagattcctgaacagctt
tcacagtcagtgcagtctcactctgtaaattctttcagaagtgacagcaggagccctact
cagttgtcagtctcatcttcaaatacactccggaatatgcctgccttgcatagggcccct
gtgtttcaccctcctgtacaccagaacctggagaagaaggagagcagctatagcagcctt
tcacctccaactctaacccccgttcaacctgttaatgctggtggtggcaaaatacaggag
ttgcagaaaccgccaactttagtacctgagcccaaggaagcccaaactggttacaagggc
acttctgagcagaatttatcagaaatgtggaagtctaataatgcccccaataatgaaaaa
gtggattggcacagcgaaagaatgagtggaaagtcgcagtccgctacagcatctgttatt
gtgcgtcctccttctagcacaaaatatgagaatgtaccagtaatgcagtctgcttcgaaa
gatcgagttagtgagagatcttcagctgtgacaaatctagcagattgcctgaaaatggcg
gaagccagggagactggaagaatcatactgccaaatatgaactcagacagttctcgcaca
caatatgaaaagagatttgcagctgtctcgcaaggcagcattcctcgtgctgtcacccct
accacaacaatcatctgtagcaccaaaacggatgtcactgcatcagcggcaatgatgacc
agcatgtcgagccaggggagctctgaagtgacttactcggtctcaagtgcagtgccttgc
cctctgctggagtgcacggccccaagagtggccggccaggcggtggcgcaaccccaggag
tgcaaggtcaaccctccggctccggttacatccgctgctggcagcgtcgctcagcccagc
tcgggattctccacctctaccgactttgtccatttgaaaaagcacaaggcagcgttggct
gcagctcagtttaaaagtagtagcaccactgagacagagtccaactctgtgaaaaatcag
acattttcaacctctctctccctagacagtgctatcgtctgtaatacaataaacaaagcg
aactctgtaggcactgggcagacttcccagacaagtcagccaaactaccacactaaactg
aaaaaggcttggctaacaaggcattcagaggaagataaaaacactaataaaaaagagagt
tcggcgagcagtgtttcagaaattattaagccatgtactgtcaatttaatagcttctaca
tcaaatgatttgcaaaataacttagatagcaaaatcttggcagataagtttgtaaaggaa
gataagcacccaaggagaaaaggaaaacgaacttacgactctggctctgaaagtggtgac
tctgatgaaagcgagagcaagtcagagcaaaggactaaacggcaacccaagccaacttac
aaaaagaaacaaaatgatttgcagaaaaaaaagggtgatgctgaggaagaaatgagacca
aatggtgttcttagcaggagcgccaaagaaaaaagcaagctgaagttacagagcggcagt
aacagcactggtatacctcgctcagtgttaaaagactggcgcaaagttaagaagctgaag
caaacgggagagtcctttttgcaggatgattcttgttctgaaataggaccaaatttgcaa
aaatgcagagaatgtaggttaataagaagtaagaaaggagaagagccaactcattcacca
gtattttgtagattttactactttcggcggttgtcttttagtaagaacggcgtggttagg
atagatggtttctcctctcctgatcaatatgatgatgaagcactgagtttatggacacat
gaaaactatgaagatgatgaactggacctagaaacttctaaatacattctagatatcata
ggggataaattttgtcagttggtaacgtctgagaaaacagccatgtcctgggtgaaaaaa
gacgccaaaattgcatggaagagagcagtgagaggagtccgtgaaatgtgtgatgcatgt
gaagccacattatttaacattcattgggtctgccaaaaatgtggatttgtggtctgccta
gattgttacaaagcaaaggaaaggaaaagttctagagataaggagttgtatgcctggatg
aagtgtgtgaaggggcagcctcatgatcacaagcacctgatgccaacacagattattcca
ggctctgttttgacagatcttttagatgctatgcacaatattagagaaaaatttgaaatt
aaatcccattgtcagtgtaccaccaagcagatcacacaagctggcaagctccctgcaatg
aatggtgtgtctcaggttttgcagaatgtccttaaccacagtaataaaatttctctgtgt
atgcctgagtctcaacagcagaatactcctcaaaagtctgagacaaatggtaacacaagt
ccaagaagtgatgtgagcacagacagcaagttaacaccacctgaatcccagtccccactg
cattggctggctgatcttgcagagcaaaaagccagagaagaaaaaaaagagaacaaagaa
tgtccttctggaaaacattcaaaggaagggaaagaccaggataatttggagtccccaaac
tgtaaaagttctcctcctgcgtcccagaacaacgagcagggctcgactttacgagatctg
ttaactacaacagcaggcaaactgcgtctgggttctacagatgctggcattgcttttgct
ccagtttactctacaggaacagcaagtggaaagagtggaaggactatgccaaacattctt
gatgacataattgcttcagtagtagaaaacaagattccgccaaatagagcaccaaagata
aatgtaaaatctgaaataaaagatgagccaaaggatgataagaaatgtattcaggatgac
tgcagtaaacggtacagtgatatccagtattcgtggatctgtgataagcatgttctgtgg
ctcagagaccataaaaacagcaacaactggaagctcttcaaagagtgctggaaacaagga
aggcccgttttggtgtctggtatgcataagaaaatgaacttcagcctgtggaaagctgag
tcaatcagtctggattttggaaaccagcaagccgatatcttgaattgcaaggacagtatt
atttcaaacaccaatgtcaaggagttctgggatggttttgaagatgtttcaaaacggcaa
aaagtaaaaaatggagaaacacctctactaaaactgaaagactggccttctggtgaagat
ttcaagaccatgatgccagcaaggtatgaggacttactaaaaagtttacccttgcctgaa
tattgtagtccagaaggaaaactaaacttggcttcccatctgccaggattttttgtccgc
ccagatttggggcccaggctatgcagcgcatatggtgtggctgctactaaagaccatgac
ataggaaccacaaatctccatattgaagtttctgatgttgtgaacatccttgtttatgtt
ggcatagccaaaggaaatggagtactttctaaatcaggagttttgaagaagttggaagag
gaagatttggatgaccttttaaggaagcggttgaaagattcaagtgaattacctggtgct
ttatggcacatttatgctggcaaagatgctgacaagataagagagtttctgcaaaagata
gcaaaggagcaaggcctagacgttttaccagagcacgatccaatccgagatcagagctgg
tatgtgaataaaaaacttcgccaaagacttcttgaagaatatggagtaaaaacctgcacg
gttattcagttccttggagatgctattattctaccagcaggagcacttcatcaggtgcaa
aactttcacagctgtgttcaagtaacagaagactttgtgtctccagaacatcttgtacag
tcatttcacttaacgcaggagctgaggctgtcaaaggaagaaatcaattacgatgataaa
ctgcaggtcaaaaatattttgtatcacgcagttaaagaaatggtgagagctttgaagatt
cacgaaggtgaagtggaagatacggatgagaactga
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integrated database retrieval system
