Ficedula albicollis (collared flycatcher): 101819136
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Entry
101819136 CDS
T02815
Symbol
TAF3
Name
(RefSeq) TATA-box binding protein associated factor 3
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101819136 (TAF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fab03021
]
101819136 (TAF3)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101819136 (TAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
PHD_2
RNA_pol_Rpc4
PHD_5
Motif
Other DBs
NCBI-GeneID:
101819136
NCBI-ProteinID:
XP_016160367
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All DBs
Position
1A:4439568..4467583
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AA seq
797 aa
AA seq
DB search
MLFVTEEEEEQVPTDGGTSAEAMQVPLEEEGDMEEDEAINDENYLSKRPLESPDAEEFPP
VKRPKLSVSKGDALDGAVEPREPLSSINTQKVPPMLSPVHVQDSTDLAPPSPEPPMLAPI
AKPQVPTPKPLEAKPFVPKTKSKTSSPGQKTKSPKTTPSPVVAGSPIRSPKPGSKEKKSP
GRAKSPKSPKSPKVPAHVPQPPVKPETPSRTPLAALSEKIGKENIQVKQGQTPPEPAPKP
NMDNQVKKAPVMDKTIDDSIDAVIARACAEREPDPFEFSSGSESEGEIFTSPKRLSISES
TTPKPSVPANNANKAGATPIPASGGTSSSDISWTMDDSIDEVIRKANMGAPSNPPTSFPY
FSSPSASPPTPEPLLKVYEEKTKLASSTEVKKKLKKELKTKMKKKEKQKEKDKEKNKEKN
KDKEKNKEKDKDKEGNKEAKFQWKELLKEDDPDPYKFKLKDFEDADTKVKLKDGNTKKER
EKHKDKKKEKEKGKKDKDKKDKEKLKDKGKEDKIKVPSAPLVLPPKEMSMPLFSTPSAMR
LPSMLPSLSPMLPEKLFEEKEKPKEKKKDKKEKKKKKEREKDKEKEKKEKEKERKEREKK
EKEKEKHKHEKIKVEPVVPAPSPVIPRLTLRVGAGQDKIVISKVVSAPEAKPSTPAARPK
TPPPVPSPAPAPVHVTPPPAPAPPPPQATISPVLIPPPSPAVSAAGGSKAPVRSVVTETV
STYVIRDEWGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGLTAAPPEEMQWFCSKC
ANKRKDKKHKKRKHRAH
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgctttttgttacagaagaggaagaggagcaggttcctaccgatggaggtacatctgca
gaggccatgcaggtcccactggaagaagaaggagatatggaagaggatgaggcaattaat
gatgagaactacttgagcaagagaccattagaaagtcctgatgctgaggaattcccacct
gtgaaaaggccaaaactgtctgtttccaaaggggatgccttggacggagcagtggaacca
cgtgagcctcttagctcgataaatacacaaaaagtcccaccaatgctttctccagttcac
gttcaggacagtacagacttagcccccccttccccagaaccgcccatgttggctcccatt
gcaaaaccccaagtgccgacccccaaacctttagaggcaaagccgtttgtacccaaaaca
aagtccaagacaagttctccgggacaaaagacaaaatcaccgaaaactacaccctcacca
gtggtagctgggagtcccattcgttcaccaaaacctggatccaaagaaaaaaagtcacca
ggccgcgccaagagcccgaaaagccccaaaagtccaaaggttcctgctcatgttccgcag
ccacctgtgaagcctgaaacaccgagcagaacccctctggctgcactgagtgagaagata
ggaaaggaaaacattcaagtgaaacagggacagacgccacctgagcctgcccccaagcca
aatatggacaaccaggtgaagaaagcgccggtcatggacaagaccattgatgactcaatc
gatgctgtgattgctcgtgcgtgtgcagaacgggaacccgatcccttcgagttttcctct
ggttctgaatcagaaggggaaatttttaccagtcctaaaagactttctatttcagagtct
acaactcctaaaccttctgttcctgccaataatgcaaataaggcaggagcaactccaata
cctgcctcaggtgggacttcgagttcagacatttcatggacaatggatgactcaattgat
gaggtcattcggaaagcaaacatgggggcaccttctaatccacctaccagcttcccttac
ttctcctctccttctgcttcacctccaactccagagcctcttctcaaagtctatgaagag
aaaaccaagttggcttcatcgacagaagtgaaaaagaaattgaaaaaagagctgaaaact
aaaatgaagaagaaagaaaaacaaaaagaaaaggataaagagaagaacaaggagaaaaat
aaggataaggaaaagaacaaggagaaagataaagacaaggaaggaaacaaggaagcaaag
tttcagtggaaggaactactcaaagaggatgatcctgatccgtataaattcaaactaaag
gactttgaggatgctgacacaaaagtaaagttgaaagatggcaataccaaaaaagagaga
gaaaaacataaagataaaaagaaagagaaagagaaaggcaaaaaggacaaggataaaaaa
gacaaagagaaactcaaagataagggtaaggaagataagataaaggtgccatcagcacct
cttgtgttgcctcccaaagaaatgtctatgcccttgttcagcacaccatctgccatgagg
cttcccagcatgttaccttccttgtctcccatgctacctgaaaaactatttgaggagaaa
gagaaaccgaaagagaagaagaaggacaaaaaagagaagaagaaaaagaaagaaagggag
aaggacaaagaaaaggaaaagaaggagaaggaaaaggagaggaaagaaagagaaaagaaa
gaaaaagaaaaggagaaacacaaacatgaaaagataaaggtggaaccagttgttccagct
ccatcaccggttattcctcggctgactttaagagtgggcgcaggccaagacaagatagtc
atcagcaaggtggtgtcagctccagaggccaaaccttccactccagcagcacggcccaag
acacctccgcctgtgccatcaccggcgccagctcctgttcatgtcacccctcctcctgct
ccagctcctcctcctccccaggccaccatctcaccagtcctgatcccaccaccctcccca
gctgtgtcagcagctggaggctccaaagctcccgtccggagcgtggtgaccgagaccgtc
agtacttacgtgatccgagacgagtggggtaaccagatctggatctgtcctggctgtaac
aagccagatgatggcagtccaatgataggttgtgatgactgcgatgactggtatcactgg
ccttgcgttgggcttacggccgcacccccagaagagatgcagtggttctgctccaagtgt
gccaacaaaaggaaggataaaaaacacaagaagaggaagcacagggcgcactga
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