Ficedula albicollis (collared flycatcher): 101819281
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Entry
101819281 CDS
T02815
Symbol
NR1H4
Name
(RefSeq) nuclear receptor subfamily 1 group H member 4
KO
K08537
farnesoid X receptor
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101819281 (NR1H4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
fab03310
]
101819281 (NR1H4)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
101819281 (NR1H4)
Nuclear receptors [BR:
fab03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
101819281 (NR1H4)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
101819281
NCBI-ProteinID:
XP_005039619
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Position
1A:47630110..47667714
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AA seq
477 aa
AA seq
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MGSEMNLIGHHQLATADGFPLAEGPHLFGVLSEPMSSPVQEADVSPYAQYNNVPFPQVQP
QISSPPYYSNLGFYPPQHEEWYSPGMYELRRLPSETFFTRETEIMDIPAAKKPRLGHSTG
RVKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCEMDMYMRRKC
QECRLRKCKQMGMLAECMYTGLLTEIQCKSKRLRKNVKQPPDQTVNEDNEGHDVKQVTST
TKIYREKIELTPEQQKLLDYIMDSYSKQQIPQEVSKKLLNEEFSAEGNFLILTEMATSHV
QVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFSKKLPTGHTVLLEERIRNS
GISDEFITPMFNFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDRDSVERLQEPLLDIL
QKVCKLHHPDNPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWDVQ
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgggatctgaaatgaatttaataggacatcatcagctagccactgctgatggatttcct
cttgctgaaggtcctcatttgtttggtgtcctttcagaaccaatgagttctccagtgcaa
gaggcagatgtgtcaccttatgcacagtacaacaatgtgccatttccccaagttcagcct
cagatctcatcgccaccttattactccaacctaggcttctaccctccgcagcacgaggaa
tggtattcccctgggatgtatgaactcaggagattaccctcagagacctttttcacaagg
gaaacagagataatggatattcctgcagccaaaaagcctagactgggtcactccacagga
agagtgaaaggagaagagctctgtgtggtctgcggtgacaaagcctctgggtaccactat
aatgcccttacttgtgaaggatgcaaaggattcttcagaagaagcatcacaaaaaatgca
gtatacaagtgtaaaaatggaggcaactgcgagatggacatgtacatgaggaggaaatgc
caggagtgccgtctaaggaaatgcaagcagatgggcatgttggctgaatgtatgtataca
ggtctcttaacagagatacagtgcaagtcaaaaaggctacggaaaaatgtgaagcagccc
ccagatcagacagtcaatgaagacaatgaaggccatgatgtgaaacaagtcacttctaca
actaaaatatatagggagaagatagaacttaccccagaacagcagaaacttcttgattat
attatggattcatacagtaaacaacaaataccccaggaggtgtcaaaaaaactattgaac
gaggaattcagcgctgaaggaaattttctgattttaacagaaatggctaccagtcacgtg
caggttcttgtggaattcaccaaaaaactaccaggcttccaaacccttgatcatgaagac
cagattgctttgctgaagggctcagcagtagaagccatgttcctccgttcagctgagatt
ttcagcaagaagcttcccacggggcacactgtccttctagaagaaagaattcgcaatagt
ggtatctcagatgaatttataactcccatgtttaatttttataaaagcattggagagctg
aagatgacacaggaagaatatgcactgctcacagccatagttatcctgtctccagatcga
caatacataaaggatagagattctgtggaaaggcttcaagaaccactgctggatattcta
caaaaagtctgcaaacttcaccacccagacaaccctcaacactttgcatgccttctgggt
cgtctcacagaattacggacatttaaccatcatcatgcagagatgctgatgtcatggaga
gtgaacgaccacaaattcacacctcttctctgtgagatctgggatgtgcagtga
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