Fibrella aestuarina: FAES_1639
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Entry
FAES_1639 CDS
T02429
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
fae
Fibrella aestuarina
Brite
KEGG Orthology (KO) [BR:
fae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fae03400
]
FAES_1639 (sbcC)
DNA repair and recombination proteins [BR:
fae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FAES_1639 (sbcC)
Archaeal homologous recombinant proteins
FAES_1639 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CCG99649
UniProt:
I0K696
LinkDB
All DBs
Position
complement(2036050..2039133)
Genome browser
AA seq
1027 aa
AA seq
DB search
MKIRQIRFRNINSFYGEHPPIAFASGVLGETGLFVISGPTGAGKSTLLDVMTLALYNRLP
RVSGPISSANIVEEGLIVNRQAAAEPNAAAYAEVEYEVGGHRYRSRWSIRKNRNSNWNNY
EMEVARLADDKPEGVLFPIKDLRDFPKKNEELIGLSYEQFVKSIVLAQGAFDQFLKAKAA
ERSKMLEKITGTEIYRQLSRKAFEHHKFLEEQISHKKQSIAGIRMLSDERLAELTEQITQ
ADERLDELAKAIKTFDAEKKWAEAAEQAENELAKAARTQEKLTDKQAAFADDRERLRQHD
EVTPLAGLLTELAGSERTLRKARQDQADITTELNRLTDQFDALLADATQFTGAAKLTETT
VGPAIEAFRDRLKAMQDRIVAEQNVAAPLTQAIRQQLANAPAHFSVPAFSPNQVDEAVET
LVAQQRTVTQQLDLLQDTYPDVTPATLDQRLDQLTVRQQVLGELALLEEEQQKRILEGQQ
LAEPITKFRQQLAENEPLLLAAMERERTAQEAVQRIEADQRRLSQEADLNQLRDALIADE
PCPLCGSREHPYATHYVNQLGTVAAALLLAKDEQKQAQTAARTLADTQLSLTAKVQEAER
TQAELRSLYREKRDYIDGLRLANQIDADMGPALMRAEQHELAQTQTRLHTLRNAWEQHRL
LTTLMTQLTDLQRSQRKLDELLIERNELYAGDDWAQRANTLLRTTADLQGRIGTQTELLQ
KAEADEQAALADERRILTALKPLFKKRNLIDAATARALLLDAPTVQKLRTQQEALDRERI
ELDQRTADEQRRLADAQKNRKTELPLAEVRRELDTLRREQQKVLSASGHARGEMDANRKS
LQAHQKGISELGQLEAAIIPWRELKKLIGSATGDSFSKFAQSLTLSQLIGLANRRLTDLT
DRYLLLPPRDDQDDLFVVDLYQGQAERTITSLSGGETFTLSLALALGLSDLASRNVQIDS
LFIDEGFGTLDPDALDTAIVMLEKLQQDSQKTIGIISHRHEIKERISVQIQVEKGNDGNS
RVKVVSE
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccgacagattcgattcaggaatatcaactcgttttacggcgagcacccgccc
atcgcgtttgcctctggggtgctcggcgaaacggggctttttgtgatttcggggccaacg
ggcgcgggcaagtcgacgctgctcgacgtgatgacgctggcgctatataaccggcttccc
cgcgtgagtggccccatctcgtcggccaatattgttgaggaggggttaattgtaaaccgg
caggccgccgccgagcccaacgccgccgcctacgccgaagtggaatacgaggtcggcggg
catcggtatcggtcgcggtggtcaattcgaaaaaaccggaacagcaactggaacaactac
gagatggaagtggcccggctggccgacgataaaccggagggcgtgttgtttccgatcaaa
gacctgcgcgatttcccgaagaaaaacgaagaactgattggcctctcctacgagcagttc
gtgaagtcgattgtgctggcgcagggggctttcgaccagtttttgaaagccaaagccgcc
gaacggagtaagatgctggagaaaattaccggcaccgaaatctaccggcaactcagtcgg
aaggcgtttgagcatcataaattcctggaagaacagatcagccacaaaaagcagtcgatt
gcgggcatccggatgctgagcgacgaacggctggccgaactgaccgagcagattacgcag
gccgacgaacgcctcgacgagttggccaaggccataaaaacgtttgatgccgaaaaaaag
tgggccgaagccgccgaacaggccgaaaacgaactggctaaagcagcacgtacccaggaa
aaactgaccgacaaacaagccgcctttgccgatgatcgtgaacgcctccggcagcatgac
gaggtgacgccccttgccggactactgaccgaactggcgggcagcgaacgcaccctgcgc
aaagcccggcaggatcaggccgacatcacgaccgaactgaaccggctaaccgatcagttc
gacgcgttgctagccgatgcaacccagtttaccggcgcagccaaactgaccgaaacgacc
gtcgggcccgccatcgaagccttccgtgaccgactgaaggcgatgcaggatcggattgtg
gccgagcaaaatgtggccgcgccgctgacgcaggccatccggcagcaactggccaacgcc
ccggcgcattttagtgtaccggcattctcgcccaatcaggtcgacgaggcggtggaaacg
ctggtggcgcaacagcggacggtaacgcagcaactcgacctgttgcaggatacgtaccca
gacgtaacgcccgccaccctcgaccaacgcctcgatcagctcacggttcggcagcaggtg
ctgggcgaactggcgctgctggaagaggagcagcagaagcggattctggaagggcagcaa
ctagccgagccgattacaaagttcagacagcaactagccgagaacgaaccgcttttactc
gcggcgatggagcgcgaacggactgcgcaggaggccgtgcaacggatcgaagccgaccaa
cgacgactcagccaggaagccgacctgaaccagttgcgtgacgcgctgattgccgacgag
ccctgcccgctatgtgggtcgcgggagcacccgtatgcgacccattatgtcaaccagttg
gggacggtggccgcagccctactgctggccaaagacgagcagaagcaggcccaaaccgcc
gcccgaacgctcgccgacacccagcttagcctgacggcaaaagtgcaggaggcggaacgt
acccaggccgaattacgcagcctttaccgtgaaaagcgtgattacatcgatggccttcgt
ttggccaaccagatcgatgccgacatggggccggcgctgatgcgggctgaacagcacgaa
ctcgctcagacgcaaacgcggctccacacgctacgcaacgcctgggaacaacaccgcctg
ctcacgacgctaatgacgcagttgaccgatcttcaacggagtcagcgcaagttggatgag
ttattgatcgagcgaaacgagctatatgcgggcgacgattgggcgcaacgggccaatacc
ctgctgcgcaccaccgccgatttgcagggccgcattggtacgcaaaccgaattgctccag
aaagccgaagccgacgaacaggcggctctggccgatgagcgccgcatcctgacggctctg
aagccactcttcaagaaacgaaatctgattgacgcggctaccgcgcgggcgctgctgctg
gatgcgccgacggtgcagaaactacgtacccagcaggaagccctcgaccgcgaacgcatc
gaactggaccaacggaccgccgacgaacaacgccgcctcgccgacgcccagaaaaaccgc
aaaaccgagcttcccctcgccgaggtacgccgcgaactggacacgctccgccgcgaacaa
caaaaggtgttgtcggcatcgggccatgcgcggggcgaaatggatgccaaccgcaagagt
ttgcaggcgcatcagaagggaataagtgaactggggcagttagaagcggccattatcccc
tggcgtgaattgaagaagttgatcggcagcgccacgggcgattcgttcagcaagtttgcc
caaagcctcacgctctcgcagttgatcgggctggccaatcggcgcctcaccgacctcacc
gaccgctacctgctcctgccgccgcgcgacgatcaggacgatctgtttgtggtggatctg
tatcaggggcaggccgagcgtacgattacgagtctgtcgggtggcgagacgtttacgctg
agtctggcactggcgctggggttatccgatctggcgtcgcgcaatgtgcagatcgacagc
ctgtttatcgacgagggcttcggcacgctcgaccccgacgcgctggatacggccatcgtg
atgctggaaaagcttcagcaggacagccagaaaacgattggtattatctcgcaccggcac
gaaatcaaggagcggatttccgtgcaaatccaggtcgagaaaggcaacgacggcaatagc
cgggtgaaggtggttagtgagtga
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integrated database retrieval system
