Frankia alni: FRAAL0380
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Entry
FRAAL0380 CDS
T00384
Symbol
gadB
Name
(GenBank) glutamate decarboxylase, PLP-dependent, isozyme beta
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
fal
Frankia alni
Pathway
fal00250
Alanine, aspartate and glutamate metabolism
fal00410
beta-Alanine metabolism
fal00430
Taurine and hypotaurine metabolism
fal00650
Butanoate metabolism
fal01100
Metabolic pathways
fal01110
Biosynthesis of secondary metabolites
fal01120
Microbial metabolism in diverse environments
fal02024
Quorum sensing
Module
fal_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
FRAAL0380 (gadB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
FRAAL0380 (gadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
FRAAL0380 (gadB)
00430 Taurine and hypotaurine metabolism
FRAAL0380 (gadB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FRAAL0380 (gadB)
Enzymes [BR:
fal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
FRAAL0380 (gadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
DUF5386
Motif
Other DBs
NCBI-ProteinID:
CAJ59056
RhizoBase:
FRAAL0380
UniProt:
Q0RTP2
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All DBs
Position
448515..449921
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AA seq
468 aa
AA seq
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MALHGKASGSQAEQTVDVRPQLVRPGEDVVVPRFRIPRESISPETAYQIVHDELMLDGNA
RLNLATFVTTWMDPQADRLMAECASKNMIDKDEYPQTAELEKRCVNILADLWHAPDSEHA
VGCSTTGSSEACMLAGLALLRRWRARRRAAGAPADRPNLVMGVNVQVCWDKFARYWDVEP
RLVPMAPGRTHLTADEAAARCDENTIGVVAILGSTFDGSYEPVAEIAAALDRLAAAGGPD
VPVHVDGASGGFVAPFCDPELVWDFQLDRVVSINASGHKYGLVYPGVGWVLWRDRAHLPD
ELVFEVDYLGGKMPTFSLNFSRPGAQVVTQYYTLLQLGFAGYRRVAQACRDNARWLADEV
ARMGPFELVSDGSGIPAFAFRLRDEITDYTVFDISELLRTRGWLVPAYRFPPDLTDLAVL
RIVVRHEFSRDLAGLLVADLRRVVDRLSGAGRPLPPPPPDGEAASFHH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcacgggaaggcgagtgggtcgcaggcggagcagacggtcgacgtgcggccg
cagctggtccggccgggggaggacgtggtcgtcccccggttccggatcccgcgggagtcg
atctcgcccgagaccgcctaccagatcgttcatgacgagctgatgctcgacggcaacgcg
cggctgaacctggcgacgttcgtgaccacctggatggacccccaggccgatcggctgatg
gccgagtgcgcatccaagaacatgatcgacaaggatgagtacccgcagacggcggagctg
gagaagcgctgcgtcaacatcctcgcggacctgtggcacgcccccgactcggagcatgcg
gtcggctgctcgaccaccggctcctccgaggcgtgcatgctcgccggcctggcgctgctg
cgccgctggcgggcccggcggcgggcggcgggcgccccggccgaccggccgaacctcgtc
atgggcgtcaacgtccaggtgtgctgggacaagttcgcccgctactgggacgtggagcca
cggctggttccgatggcgccgggccgcacgcacctgaccgcagacgaggccgccgcacgc
tgtgacgagaacacgatcggcgtcgtggcgatcctcggctcgacgttcgacggcagttac
gagccggtcgccgagatcgccgccgcactcgaccgcctggccgccgcgggtggcccggac
gtgccggtgcacgtcgacggcgcgtccggcgggttcgtcgccccgttctgcgaccccgaa
ctggtctgggacttccagctcgaccgggtcgtgtcgatcaatgcctcggggcacaagtac
gggctggtctacccgggggtcggctgggtgctgtggcgcgaccgcgcccacctgccggac
gagctcgtgttcgaggtggactacctcggcgggaagatgccgacgttctcgctgaacttc
tcccggccgggggctcaggtcgtcacgcagtactacacgctgctccaactgggcttcgcc
ggctaccgccgggtggctcaggcgtgccgggacaacgcccggtggctcgccgacgaggtg
gcccggatgggtcccttcgagctcgtctcggacggcagcgggattcccgcgttcgcgttc
cggctgcgcgacgagatcaccgactacaccgtcttcgacatctccgagctgctgcgtacc
cgcggctggctggtgcccgcctaccggttcccgccggacctgaccgacctcgccgtgctg
cggatcgtggtacgccacgagttcagccgcgatctcgccgggctgctcgtcgccgacctg
cgccgggtcgtggacaggctgagcggcgccgggcggcccctcccgccgcccccgccggac
ggcgaggcggcctccttccaccactga
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