Frankia alni: FRAAL3297
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Entry
FRAAL3297 CDS
T00384
Symbol
icd
Name
(GenBank) Isocitrate dehydrogenase [NADP] (Oxalosuccinate decarboxylase) (IDH)
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
fal
Frankia alni
Pathway
fal00020
Citrate cycle (TCA cycle)
fal00480
Glutathione metabolism
fal01100
Metabolic pathways
fal01110
Biosynthesis of secondary metabolites
fal01120
Microbial metabolism in diverse environments
fal01200
Carbon metabolism
fal01210
2-Oxocarboxylic acid metabolism
fal01230
Biosynthesis of amino acids
Module
fal_M00009
Citrate cycle (TCA cycle, Krebs cycle)
fal_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FRAAL3297 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
FRAAL3297 (icd)
Enzymes [BR:
fal01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
FRAAL3297 (icd)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
CAJ61941
RhizoBase:
FRAAL3297
UniProt:
Q0RKL6
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All DBs
Position
3583873..3586092
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AA seq
739 aa
AA seq
DB search
MTDSTIIYTHTDEAPALATYSFLPVVQAYAATAGVPVESRDISLAGRIIASFPEHLEPGQ
RIDDALAELGELAKTPGANIIKLPNISASIPQLKAAVAELQQQGYALPDYPDDPRTDAER
DIRARYDRIKGSAVNPVLREGNSDRRAPASVKAYARAHPHRMGAWSAESKTNVATMGADD
FRSTEKSVILPADDTLRIELVGDDGSTSVLLPALPVLAGEVIDAAVLRVAALREFLTAQI
ARAKAEGVLFSLHLKATMMKVSDPIIFGHGVRAFFPRTFATYGQVLAAAGLTPNDGLGGI
LKGLDALPDGAAIRASFEAELAEGPALAMVDSDRGITNLHVPSDIIVDASMPAMIRTSGH
MWGPDGAEADTLAVLPDSSYAGIYQVVIDDCRAHGAYDPATMGSVPNVGLMAQKAEEYGS
HDKTFEIATTGTVRVVNAAGEAVLEQAVSAGDIFRACQTKDAPIRDWVKLAVTRARATGD
PAVFWLDAARAHDARLIEKVQAYLPEYDTAGLTIEIKAPVDAIAFSLQRIRRGENTISVT
GNVLRDYLTDLFPILELGTSAKMLSVVPLMNGGGLFETGAGGSAPKHVQQLVKENYLRWD
SLGEFLALAVSFEQFALSTGNSRAKVLADTLDRATATFLNEDKSPARRVGGIDNRGSHFY
LSLYWAQELAAQTDDAALAEAFAPLAKTLTDQEQTIAEELLAVQGNPADIGGYYQPDPVK
ATEIMRPSKSFNEALALLG
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgactgattcgacgatcatctatacccacacggacgaggccccggccctggccacgtac
tcgttcctgccggtggtgcaggcgtacgcggcgacggccggcgtcccggtggagagccgc
gacatctccctcgcggggcggatcatcgccagcttccccgagcatctcgaacccgggcag
cgcatcgacgacgcgctcgccgagctcggtgagctggcgaagacccccggggcgaacatc
atcaagctgccgaacatctcggcgtcgatcccgcagctcaaggcggcggtcgccgagctg
cagcagcagggctacgcgttgccggactaccccgacgacccgcgtaccgacgccgagcgc
gacatccgcgcccgctacgacaggatcaagggcagcgccgtcaacccggtgctgcgcgag
ggcaactccgaccgtcgcgcccccgcctcggtgaaggcctacgcccgcgcgcacccgcac
cggatgggcgcgtggagcgccgagtcgaagacgaacgtcgccaccatgggcgccgacgac
ttccgctccaccgagaagtccgtgatcctgcccgcggacgacaccctgcggatcgagctg
gtgggcgacgacggcagcaccagcgtcctgctgcccgccctgccggtgctcgccggcgag
gtcatcgacgccgccgtcctgcgggtcgccgcgctgcgcgagttcctcaccgcgcagatc
gcccgggcgaaggccgagggagtgctgttctccctgcacctcaaggccacgatgatgaag
gtctccgacccgatcatcttcggccacggggtccgcgccttcttcccgaggacgttcgcc
acctacggccaggtactcgcggccgccgggctgaccccgaacgacggcctcggcggcatc
ctcaagggcctcgacgcgctgcccgacggcgcggcgatcagggcgtcgttcgaggccgag
ctcgccgagggcccggccctggcgatggtcgactccgaccgcggcatcaccaacctgcac
gtaccgagcgacatcatcgtcgacgcctccatgccggcgatgatccgcacctccggccac
atgtggggcccggacggcgccgaggccgacaccctcgccgtgctgccggactccagctac
gccggcatctaccaggtcgtcatcgacgactgccgcgcgcacggcgcctacgacccggcg
acgatgggctcggtgcccaacgtcggcctcatggcgcagaaggccgaggagtacggcagc
cacgacaagaccttcgagatcgccaccaccggcaccgtccgcgtggtcaacgccgccggc
gaggccgtgctggagcaggctgtcagcgccggcgacatcttccgcgcctgccagacgaag
gacgcccccatccgggactgggtgaagctcgccgtcacccgcgcccgcgccaccggcgac
ccggcggtgttctggctggacgccgcccgcgcccacgacgcccgcctgatcgagaaggtc
caggcctacctgcccgagtacgacacggccggcctcacgatcgagatcaaagcgccggtc
gacgcgatcgcgttctcgctgcagcggatccgccgcggcgagaacaccatctccgtcacc
ggcaacgtgctgcgcgactacctcaccgacctgttccccatcctggagctcggcacgagc
gccaagatgctctcggtggtcccgctgatgaacggcggcggcctgttcgagaccggcgcc
ggcggctccgcgcccaagcacgtccagcagctcgtcaaggagaactacctgcgctgggac
agcctcggtgagttcctcgcgctcgcggtgagcttcgagcagttcgccctgtccaccggc
aactcccgggcgaaggtcctcgccgacaccctcgaccgggcgaccgccacgttcctcaac
gaggacaagtccccggcgcggcgcgtcggcggcatcgacaaccgcggcagccacttctac
ctgtccctgtactgggcgcaggagctggccgcccagaccgacgacgccgccctggccgag
gccttcgcccccctggcgaagaccctcaccgaccaggagcagaccatcgccgaggagctg
ctcgccgtgcagggcaacccggccgacatcggcggctactaccagcccgacccggtgaag
gccaccgagatcatgcgcccctcgaagagcttcaacgaggccctcgcgctgctcggctga
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