Fopius arisanus: 105269762
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Entry
105269762 CDS
T07645
Name
(RefSeq) uncharacterized protein LOC105269762 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
fas
Fopius arisanus
Pathway
fas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105269762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fas03021
]
105269762
03019 Messenger RNA biogenesis [BR:
fas03019
]
105269762
Transcription machinery [BR:
fas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105269762
Messenger RNA biogenesis [BR:
fas03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
105269762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
Pcf11_helical
CFIA_Pcf11
Motif
Other DBs
NCBI-GeneID:
105269762
NCBI-ProteinID:
XP_011308566
UniProt:
A0A9R1TFT8
LinkDB
All DBs
Position
Unknown
AA seq
1855 aa
AA seq
DB search
MTSTKAKEIADDYFSSLKDLTINSKPLINMLTMLAEDNVEHAEAIVEAVENHLQKVESKF
KLPVLYLIDSIVKNVNGAYLNLFTQNIVNTFCGVFEKVDEVTRASMWKLRQTWSNVFPAT
KLYSLDIRVQSIDPAWPITASPPTISSGSIHLNPRFLSMSQVSSTQPPAVAMPLATPPTD
LAPIHINSKREELLNQQKKLLELQKQKVELELLQAKLNLEEQQKQLEEQDPAVKSGMVTV
PHPTHQSHQNSTTVNTTKEIGPDQQILPSLVIPTSEENQGKPVAPVMPSQVVKQVSKQVS
RDKKLKDEFPAAAASLLKNAGTTNGPRIAPASSLMVASARQASRDPRLKAITQQPLTDIH
QVTSTSSISTVLCDKLKQQLKMQLASKIKPTMNNPLIAEGSLKNSINDNPINNNKPLNSC
KDGLSNRSNLKKERTSSNSNNSLSTNNAKSMNQVGISTNSSLSANILSSVSSNTSVNRAH
SDTRVKDNKRDTSSSRCDKATTSSKSAHRKLGNKSRLKQSSSSPTKLIKLDRETSPDRSK
SRDKESSDSSPTSLRTSPQSSSPLSKNRKKLSSKGRKRSPSPYRIPRRNLSAKEVSTSIG
STGGLTEEEQSGSLIVSPPHPPAFKDIGQNTRQRNYIRRNKEGQGSSPEQSGLVDEGESL
IESANKDEDLRAALPPPSVAAAICQKKEDLDLRVLPPPVNKRQSAEHIDGGATKRTKTEK
FDALFGHEDVDLRTLTNPKAGRPPTPPPPVISGEDNKASWAKLKSPSKNDREKQIGFDEK
RDRDRNKDRLGRPRLYKLSDDTKDRRRGFSSDEDSRPRRNKDTDKSDRGDRNIEIIMKQA
EEQWREGSISKTEYHKLIQEIWQMNEDQKLRAAQRKEKEIGSLVWEKGIEIGGYSPKDGD
MGHRKDHHNRNGPRWNQPWQPGPWAHPPFGPTAHFNPEFRPVGPWQNPRFPPMRPDFNQF
HSGFNSNLGPRMGGIMGPMGPNAPMMPGLLANGPIGPVGINPLNINGPGGLLINGPSRGN
LLGHLPNAVNSVNTSVQPSSPPQFDEKSSSEENRHSRELPSPDPKLLEEISSDSMKSINI
DNMPREIRYYGSIGVVFMSWDDPREIGFQDGTRRILIDDKDTITCAFNEPYKEFLYENDV
HKIRLGAPTRELYIDDRWYECYFGGPPITVDLGSKKVSIKLEGPPPQVKIGSVKRTDLVI
AKINLIINARTMVPVFLDSKPQVFELDGHTHTLEFTDSLKTVLLNGRPFAVEFGGLPKPI
MIRDKKHFIRFSVLPRGIRAGGIKIAGMKGESPEEGSNDVPVVREKSETAGGSANTGTSG
IEHDSASQDASDLQTGCKSDLQLDMLSSALSTAMAPASGMSYEAEPTDKKTPAAPVLPLN
LNLNELFQRLVDTGIVPKITGAAAEVKKESEVKKEPEAPLILFEKPETLKLPPNFSGLYS
GMQCGSCSLRFGPDRPMKYSAHLDWHFRQNRREKDSARKAHSRMWYYDTSDWTQFETCEE
SDDRARSWFEMEKQNAETEGANAEDTLQETVLPSVPTGSDEDGQCQVCHDAFEQFYNEEK
EEWHLRPAVIFEEKNYHPLCLEDHKRALEKSAMSVDEPATDAEDDKKEEINESMDTSTDD
AKDPELESKEESIAEEPTDESMNPPEESVEPPGEPEVQNEEEISENTEEEVKPMDEENTE
SLEPPVETVDEVEVKITEEVEEKVTENFDLVKIKEEPIDSMETEEQVFDFSNVHVKAEPE
DPEPEPIVPETGAPVDTTLAAMTSSIDGNVELESTGSTIPAPQSKIKINITKTLITTNKE
PEEPKEKPQSSDIVTEENPQLLVPASIKPSLQGRKLSVLPPVQKGHELSGLCSIM
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgacaaaggcgaaggaaatagcggatgattatttttcgtccctgaaggacctc
accatcaactccaagcccctcatcaacatgctcacaatgctcgctgaggacaacgttgaa
cacgccgaggctatcgtcgaagctgttgagaatcacttacaaaaggtggaaagcaagttc
aagctaccggtcctctatctcatcgactcaatcgtcaagaacgttaatggagcgtattta
aacctgttcacgcaaaacattgtcaatacgttttgtggtgtcttcgagaaggtggatgag
gttaccagagccagcatgtggaaactacgacagacgtggagtaatgtttttcctgcaact
aaattgtattctctcgatatacgagtacagagcatcgacccagcgtggcccatcacggca
tcaccacccacgatatcatcgggttcgatacatctgaatccaagatttttgtccatgtcg
caggtgtcgtcgactcaacctccagcagtagcaatgccattggcaactcctccaaccgat
ctggcaccgattcatataaattcaaaacgcgaagagctactgaatcagcagaaaaaatta
ctagaacttcaaaagcaaaaagttgaattagaattgctgcaggcaaagttgaatcttgag
gagcagcagaagcagttggaagagcaagatccagcagtgaaatctggaatggtaactgtt
ccccatccaactcatcagtctcatcaaaattcaacaactgtaaacacaactaaagagatt
ggtcctgaccagcagatactcccatcactagtcattccaacgagtgaggagaatcaggga
aagccagtggcaccagtgatgcctagtcaagtggttaaacaagtctctaagcaggtcagc
agagataaaaaactaaaagacgaatttccagcagcagctgcatctctcctgaaaaatgct
ggcacaacaaatggtcctcgtattgctccagcgagcagtctgatggttgcttcagcacgt
caagcatctcgtgatcctcgactgaaagccataactcaacagcccctaacagacatccac
caagtaacctcaacatcgtcaatatccactgtactttgtgataaattaaagcagcagttg
aaaatgcaattggctagcaaaatcaagccaacaatgaataatccattgatcgccgaagga
tcgttaaaaaatagtattaacgataatccaatcaacaataataaaccattaaattcgtgc
aaagatggtctctcaaatcgttcaaatctaaagaaagaacgaacctctagcaatagtaac
aatagtttatccacaaataatgcaaaatcaatgaatcaagttggtatatcgactaattca
tcattatcagctaatatattatcatccgtatcgtcgaatacgagtgttaatcgggcgcat
agtgatactagagttaaagacaataagcgagatacatcatcatcgagatgtgacaaagca
acgacatcctccaaatcagcccatagaaagttaggtaataaatcgcgattaaagcagtcg
tcatcctcaccaacaaaattaataaaattagatcgtgagacgagtccagatagatcaaaa
tcacgtgataaggagagctcggatagttcaccaacgtctttgcgtacctcaccacagtcc
tcatccccattatcaaaaaatcgtaagaaattaagcagtaaagggagaaaacgtagtcca
agtccttatcgcattccaaggcgtaatttaagtgctaaggaggtatcaacgtcaatcggt
agtacaggtggtcttactgaggaggaacagtctggttccctcattgtatcacctcctcat
ccaccagctttcaaagatatcggacagaatacgagacagagaaattatattaggaggaat
aaagagggtcagggctccagtcctgaacagtccgggctggttgacgagggggagagtctc
attgagtcggctaataaggatgaagatcttagggctgctctaccaccgcccagtgttgct
gctgctatttgtcaaaaaaaagaagacttggatctgcgagtcctgccaccaccagtgaat
aaaagacaaagtgctgaacatattgatggaggggcaacaaagagaacaaaaacggagaag
tttgatgcactattcggccacgaggatgttgacctgcgtaccctgacgaacccgaaggca
ggtagaccaccaacaccaccaccacctgtgatctccggtgaggacaataaagcaagctgg
gccaaactaaaatcaccctcgaagaacgatcgcgagaagcaaatcggtttcgacgagaag
cgtgacagagatcgtaacaaagatcgtctaggtcgtccccgtctgtacaaactctcagac
gacaccaaagatcgtcgccggggtttctccagcgacgaggactcccgtccccgcagaaac
aaggataccgacaaatcagatcgtggagacagaaacatcgagatcatcatgaaacaggca
gaggagcagtggcgggagggttcaatatctaaaactgaatatcacaaattaattcaagag
atctggcagatgaatgaggatcagaagctgcgagcagctcagaggaaggagaaagagata
ggctctctggtgtgggagaagggcattgaaatcggtggctacagtccgaaggacggtgac
atgggacacagaaaggatcaccacaatcggaatggaccacgttggaatcagccctggcag
ccaggaccctgggcacatcctcccttcggtccaactgctcacttcaatcctgaatttagg
ccagtgggcccctggcagaatcccagattccctccaatgcgtccagacttcaatcagttc
cacagtggcttcaactccaatctcggaccacgaatgggtggaatcatgggcccaatgggt
cctaatgctcctatgatgcctggtcttctggcgaatggtccgataggccctgttggtatt
aatccactcaatatcaatggccctggtggtcttctaattaatggaccatctcgagggaat
ctcctcggacatcttcccaatgctgtcaactctgtcaatacctctgtgcagccatcctca
cctccgcaattcgatgagaagagctcctctgaggagaaccgacacagcagggaactaccg
tcacctgatcccaaactcctggaggaaatttccagtgacagcatgaaatccatcaacatc
gacaacatgcccagggagatcaggtattatgggtccattggtgttgtcttcatgtcctgg
gatgatcccagagaaattggtttccaggatggtacacgtagaattctcatcgatgataag
gatacgataacctgtgcgtttaatgagccgtataaggaatttttatatgagaatgatgtc
cataaaattcgactaggtgctcccactcgtgaattgtacatcgatgacaggtggtacgaa
tgttacttcggtgggcctccaattacagttgacctcggctccaagaaggtcagcataaag
ttggagggaccaccgccccaggtgaagattggctcggttaagagaacggatcttgtgata
gctaaaatcaatctcatcatcaatgccaggacaatggtgccagtttttcttgattccaag
ccccaggtattcgagctcgatggtcatacccatacgttggaattcacggactcgttgaag
actgttctcctgaatggaaggccatttgctgtggagtttgggggattgcccaagccaatt
atgatcagagataagaagcatttcatcaggttctcggttttgcctagaggtattcgcgcc
ggtggaattaagatcgctgggatgaagggagagagccctgaggaggggagtaatgatgtt
ccagtggttcgggaaaaatctgagaccgctggtggaagtgccaacactgggacatcaggg
attgagcacgactcagcctctcaggatgcttctgatctccagactggctgcaaatctgat
ttacaactggatatgctgtcctcagcgttgtccactgccatggcaccagcctctggaatg
tcctacgaggccgaacccaccgataaaaagactccagctgctccagtactgcccttgaac
ttgaatctcaatgagttgttccagagattagtggacactggaattgtcccgaagattact
ggggctgctgcggaagttaagaaggagtcggaggtgaagaaggagcctgaggcacctctc
atattattcgagaagccagagacactcaaactcccaccgaatttcagtggattgtacagt
ggaatgcagtgtggatcgtgcagtctaagatttggacctgacagacccatgaagtacagt
gctcatttggattggcacttcaggcagaacaggagggagaaggactccgccaggaaggcg
cactctaggatgtggtactatgataccagtgactggacacaattcgagacttgtgaagaa
tctgatgatagggctcgaagctggtttgaaatggagaagcaaaatgctgagactgaggga
gcaaatgccgaagacaccctccaggaaacggtcttacctagtgtaccaacaggaagtgac
gaggatggacagtgccaagtatgccatgatgcttttgaacaattttacaatgaggagaag
gaggagtggcacttgagaccagctgttatcttcgaggagaaaaattatcatcccctatgc
ctagaggatcacaagcgtgccttggagaagtccgcaatgtccgtcgacgagcctgcaaca
gacgcagaggatgacaaaaaagaggaaattaacgagtcgatggacacatccactgatgat
gcgaaagatccagaattggaatcaaaagaagaatccattgcagaagaaccgacagacgag
agtatgaatcctccggaggaatcagtggaaccccctggcgaaccagaggtacagaatgaa
gaggaaatttctgaaaacactgaggaagaggtaaaaccaatggatgaggaaaacacagaa
agcctcgagccaccagtagagactgtggacgaggttgaggtgaaaataacagaagaggtg
gaagagaaagtcactgagaattttgatcttgtgaagatcaaggaggaaccaatcgatagt
atggagactgaggaacaggtcttcgacttcagcaatgttcatgtaaaagctgaaccggaa
gatcctgaacctgaacccatagtacctgaaacaggagcaccagtggacacaacactggca
gcaatgacaagttcaatagacggtaacgttgagctggaatcaacaggttctactattccc
gctccacaatcgaagatcaaaataaatataaccaagactctaataacgacaaataaagag
cctgaagagcctaaagagaagccacagtcgtctgacatagtcaccgaggagaatccccag
ctcctcgtaccagcctcgattaagccatcactacaaggtaggaaattatcggttttgcca
cctgtgcaaaagggccacgagttgtcaggactctgttccattatgtga
DBGET
integrated database retrieval system
