Frateuria aurantia: Fraau_1999
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Entry
Fraau_1999 CDS
T01773
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
fau
Frateuria aurantia
Pathway
fau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Fraau_1999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fau03400
]
Fraau_1999
Enzymes [BR:
fau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Fraau_1999
DNA repair and recombination proteins [BR:
fau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Fraau_1999
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Fraau_1999
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Fraau_1999
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AFC86383
UniProt:
H8L1X6
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All DBs
Position
2120062..2121516
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AA seq
484 aa
AA seq
DB search
MTEPTFFWHDYETFGADPRRDRPVQFAGIRTDMELNIIEEPVMFYGLPPKDMPPHPEACL
ITRITPQLAAREGIREAEFAARVQEQLGRPGTCGVGYNSLRFDDEVTRQLLYRNFFDPYA
REWEHGNARWDLIDLVRMCEALRPDGIQWPSREDGAPSFKLEQLATANALEQAQAHDALS
DVRALIGLAQLIRQRQPRLWDWYYQLRRKQQVQSLLDPIAMTPLVHISSRYPASRHCLAI
IVPLAEHPSRPGEMIIYDLDHDPDDWLALDAQSIADRVFVARADLPEGIERVPLRTLRSN
RAPALAPMSVLRPVDLERLQLNPDIQLAHLEKLRRAPDLVSKVRDIFGHASDFPPAGDPE
LALYDGFAARADKPLLVKVRTSPPEALAGLASAFKDPRYPELLFRYRARNWPETLSAEET
ARWRAFLQDRLSGRSPTVELSLAEYFQRIASLREERTAPADQLLLDQLQVWGESLGEDLS
LPIA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgactgagccgactttcttctggcacgactacgagacgttcggtgccgaccccaggcgt
gaccgccctgtgcagttcgccggtatccgcaccgacatggagctgaacatcatcgaagaa
ccggtgatgttctacggcctgccgccgaaggacatgccgccgcatcccgaggcctgcctg
atcacccggatcacgccgcagctggcggcacgcgaaggcatccgtgaagccgaattcgct
gcgcgggtgcaggaacagctgggccggcccggaacctgcggcgtcggctacaactcgttg
cgcttcgatgacgaagtcacccggcaactgctttatcgcaatttcttcgatccatatgcc
cgcgaatgggagcatggcaatgcgcgctgggatctgatcgatctggtccggatgtgcgag
gcactgcgacccgacgggattcagtggccgagccgcgaagacggcgcgcccagcttcaag
ctggagcagctggcaacagccaatgcactggaacaggcgcaggcccatgacgcgctgtcg
gacgtgcgggcgctgatcgggttggcgcagctgatccgccagcggcaacctcgattgtgg
gactggtattaccagctgcgccgcaaacaacaggtccagtcactgctggatccgatcgcg
atgacgccgctggtccatatctcgtcacgttatcccgcaagtcgtcactgtctggccatc
atcgtgccgttggccgagcacccctcccgcccgggcgagatgatcatctacgacctagac
catgatccggatgattggctggcactggatgcccagagcattgccgaccgcgtctttgtc
gcccgcgccgatcttcccgagggcatcgagcgcgtgccgctgcgcaccttgcgcagcaat
cgcgcaccggcgctggcacccatgtcggtgttgcggccggtcgatctcgagcgactgcag
ttgaatccggacatccagctcgcccatctggagaagctgcgccgggccccggacctcgtc
agcaaggtccgcgacattttcggccatgcctcggacttcccgccagccggcgatcccgaa
ctggccctctatgacggtttcgccgcacgcgcagacaagcccttgctggtcaaggtccgt
accagtccgccggaggcactggccggactggcctccgcattcaaggatccgcgctatccc
gaattgctgttccgttaccgggcccgcaactggccggaaacgctttccgccgaggaaacg
gcccgctggagggctttccttcaggaccgactgagcggacgcagccccacggtcgagctc
agcctggccgagtatttccagcggatcgcaagcttgcgcgaggagcgtaccgcccctgcc
gatcaactgctgctggatcagctgcaggtctggggcgagtccctgggcgaagacctatcc
ctgccgattgcctga
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