Felis catus (domestic cat): 101092216
Help
Entry
101092216 CDS
T02385
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
fca
Felis catus (domestic cat)
Pathway
fca04151
PI3K-Akt signaling pathway
fca04510
Focal adhesion
fca04512
ECM-receptor interaction
fca04611
Platelet activation
fca04820
Cytoskeleton in muscle cells
fca04926
Relaxin signaling pathway
fca04933
AGE-RAGE signaling pathway in diabetic complications
fca04974
Protein digestion and absorption
fca05146
Amoebiasis
fca05165
Human papillomavirus infection
fca05205
Proteoglycans in cancer
fca05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101092216 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101092216 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101092216 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101092216 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
101092216 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
101092216 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
101092216 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
101092216 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101092216 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
101092216 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
101092216 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101092216 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
fca00536
]
101092216 (COL1A1)
Glycosaminoglycan binding proteins [BR:
fca00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101092216 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
101092216
NCBI-ProteinID:
XP_003996748
EnsemblRapid:
ENSFCTG00005017773
UniProt:
M3W2F5
LinkDB
All DBs
Position
E1:35363335..35380533
Genome browser
AA seq
1461 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQEEEDIPPVTCVQNGLRYYDRDVWKPEACRICVC
DNGNVLCDDVICDETKNCPGAHVPPGECCPVCPDGEASPTGQETTGVEGPKGDTGPRGPR
GPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSTGGISVPGPMGP
SGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGE
RGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGP
RGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGS
EGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGP
SGPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPTGLPGP
PGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGS
PGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGP
PGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGV
PGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGA
PGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGE
AGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGP
AGPTGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPVGK
EGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGL
PGQRGERGFPGLPGPSGEPGKQGPSGPSGERGPPGPMGPPGLAGPPGESGREGSPGAEGS
PGRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPIGPVGA
RGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGP
PGAAGSPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQ
PPQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLK
MCHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPHVAQKNWYISKNPKDKRH
VWYGESMTDGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGN
LKKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGNWGKTVIEYKTTKTSRLPIIDVA
PLDVGAPDQEFGIDIGPACFL
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggagggccaagaagaagaagacatcccaccagtcacctgcgtacagaac
ggcctcaggtactatgaccgagatgtttggaaacccgaggcctgccggatctgtgtctgc
gacaacggcaacgtgttgtgcgatgacgtgatctgcgacgaaaccaagaactgccccggc
gctcatgtccccccgggcgagtgctgccccgtctgccccgacggcgaggcgtcacctacc
ggccaagaaaccacaggagtcgagggacccaaaggagacactggcccccgaggcccaagg
ggacctgccggcccccctggccgcgacggcatccctggacagcctggacttcctggaccc
cccggccctcccggaccccccggaccccctggcctcggaggaaactttgctccccaaatg
tcttacggctacgatgagaagtcaactggaggaatctctgtgcctggccccatgggtcct
tctggtcctcgtggtctccctggtccccctggtgcacctggtccccaaggtttccaaggc
ccccctggtgagcctggcgagcctggagcttcaggtcccatgggtccccgtggtccccct
ggtccccctggcaagaacggagatgacggtgaagctggaaagcctggtcgtcctggtgag
cgtgggcctcctggacctcagggcgcccggggattgcctggaactgctggccttcctgga
atgaagggacacagaggtttcagtggtttggatggtgccaagggagacgctggtcctgct
ggtcccaagggcgagcctggtagccccggtgaaaatggagctcctggccagatgggtccc
cgtggtctgcctggtgagagaggacgccccggagcccctggccctgctggtgctcgtgga
aatgacggtgctaccggtgccgccggcccccctggtcccactggccccgctggtcctccc
ggcttccctggtgctgttggtgctaagggtgaagctggtccccaaggagcccgtggctct
gaaggtccccagggtgtgcgtggcgagcccggcccccctggccctgctggtgctgctggc
cctgctggaaaccccggtgctgacggacagcctggtgccaaaggtgccaacggcgctcct
gggattgctggtgctcctggcttccctggtgcccgaggcccctctggaccccagggcccc
agcggccctcccggtcccaagggtaacagtggcgaacctggtgcccccggcaacaaagga
gacactggcgccaagggagagcccggccccactggtatccaaggcccccctggccccgct
ggggaagaaggaaagcgaggagcccgaggcgaacccggccccactggcctgcccggaccc
cctggcgagcgcggtggacctggtagccgtggcttccctggcgcagatggtgtggctggt
cccaagggtcccgccggtgaacgtggttctcctggccctgctggccccaaaggttctcct
ggtgaagctggtcgccccggtgaagctggtctgcctggtgccaagggtctgaccggaagc
cccggcagccccggtccggatggcaaaactggtccccctggtcccgctggtcaagatggt
cgccccggacccccaggtccccccggtgcccgtggtcaggctggtgtgatgggattcccc
gggcctaaaggtgctgctggagagcctggcaaagcaggagaacgaggtgtccctgggccc
cctggcgctgttggtcctgctggcaaagatggagaagctggagctcagggaccccccggc
cctgccggccccgctggtgagagaggcgaacagggccctgctggctctcccggattccag
ggtcttcctggccccgcgggtcctcccggcgaagcaggcaaacctggcgaacagggtgtt
cctggagatcttggtgcccccggcccctctggagccagaggcgagagaggtttccctggt
gaacgcggtgtgcaaggtccccccggtcctgccggtcctcggggagccaacggtgcccct
ggcaatgatggtgctaagggtgatgctggtgcccccggagcccccggtagccagggcgct
cctggccttcagggaatgcctggtgaacgaggtgcagctggccttcctggccctaagggt
gacagaggcgatgccggtcccaaaggtgctgatggttctcctggcaaagatggtgtccgt
ggcctgactggccccattggtcctcctggccccgctggtgcccccggtgacaagggtgaa
gctggtcccagcggccccgctggtcccactggagctcgtggcgcccccggagaccgtggt
gagcctggtccccccggccctgctggcttcgctggcccccctggtgctgatggccaacct
ggtgctaaaggcgagcccggagacgctggtgctaaaggcgatgctggtccccctggtccc
gctggccccactggaccccccggccccatcggcaacgttggtgctcctggacccaaaggt
gctcgaggcagtgccggtccccctggtgctactggtttccctggtgctgctggccgagtc
ggtcctcccggcccctctggaaacgctggaccccctggccctcccggccctgtcggcaaa
gaaggcggcaaaggcccccgcggtgagactggccccgctgggcgtcccggggaagtcggt
ccccctggtccccctggccctgccggtgagaaaggatctcctggtgctgatggacctgct
ggtgctcccggcactcccggacctcaaggcattgctggacagcgtggcgtggttggcctg
cccggtcagcgaggagaaagaggcttccctggtcttcccggcccctctggtgaacctgga
aaacaaggtccttctggaccaagtggtgaacgtggcccccctggtcccatgggcccccct
ggattggctggaccccctggcgagtctggacgtgagggatctcctggtgctgaaggctcc
cctggacgagatggttctcccggccccaagggtgaccgtggtgagaccggccctgctggc
ccccctggtgctcctggcgctcctggtgcccctggtcctgtcggccccgctggcaagagt
ggcgaccgtggcgagactggtcccgctggtcccgccggtcccatcggccccgtcggtgct
cgtggtcccgctggaccccaaggcccccgtggtgacaagggtgagacaggcgaacagggt
gacagaggcataaagggtcaccgtggcttctccggtctccagggtccccctggccctccc
ggctctcctggtgaacaaggtccttccggagcttctggtcctgctggtccccgaggtccc
cccggcgctgctggctctcctgggaaggacggactcaacggtctcccaggccccatcggc
ccccctggtcctcgtggtcgcactggtgacgctggccctgttggtccccccggccctcct
ggaccccccggtcctcccggtcctcccagcggtggtttcgacttcagcttcctgccccag
ccacctcaagagaaggctcacgatggcggccgctactaccgggccgatgatgccaacgtg
gtccgtgaccgtgacctcgaggtggacaccaccctcaagagcctgagccagcagatcgag
aacatccggagccccgaaggcagccgcaagaaccctgcccgcacctgccgcgacctcaag
atgtgccactccgactggaagagcggagaatactggatcgatcccaaccaaggctgcaac
ctggatgccatcaaggtcttctgcaacatggagacaggtgagacctgcgtgtaccccact
cagccccacgtggcccagaagaactggtacatcagcaagaaccccaaggacaagaggcac
gtctggtatggcgagagcatgaccgacggattccagttcgagtatggtggccagggctcc
gatcccgccgatgtggccatccagctgacgttcctgcgcctgatgtccaccgaggcgtcc
cagaacatcacctaccactgcaagaacagcgtggcctacatggaccagcagactggcaac
ctcaagaaggccctgctcctccagggctccaacgagatcgagatccgggccgagggcaac
agccgcttcacctacagcgtcacctacgacggctgcacgagtcacaccggaaactggggc
aagacagtgatcgaatacaaaaccaccaagacctcccgcttgcccatcatcgatgtggcc
ccattggacgttggcgccccagaccaggaattcggcatcgacattggccctgcctgcttc
ctgtaa
DBGET
integrated database retrieval system
