Felis catus (domestic cat): 101100939
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Entry
101100939 CDS
T02385
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X2
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
fca
Felis catus (domestic cat)
Pathway
fca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101100939 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fca03041
]
101100939 (DDX46)
Enzymes [BR:
fca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101100939 (DDX46)
Spliceosome [BR:
fca03041
]
Complex A
U2 snRNP components
U2 related factors
101100939 (DDX46)
Complex B
101100939 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
101100939
NCBI-ProteinID:
XP_003980824
EnsemblRapid:
ENSFCTG00005023655
LinkDB
All DBs
Position
A1:111307198..111378088
Genome browser
AA seq
1030 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSR
SRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRSK
EKTDSGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMEN
IGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKK
FNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEV
DLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGIT
VKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSG
KTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYG
GTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEP
QVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIE
EEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSI
INDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYT
FITEDQARYAGDIIKALELSGTAVPSDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKFD
ETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPAP
TAGNAEKLEIAKRLALRINAQKNLGIESQDVMQQATNAILRGGTILAPTVSAKTIAEQLA
EKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRISEY
SEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSYQ
PTNKGRYKVL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcacgccattatcggaagcggtcagcatcaagggggcgctctggaagt
cgatctagaagtcgctcacctgacaaaagaagtaaacgtggagatgacaggcggtctaga
agcagagatagagatagaaggagagagaggtctcgtagcagggataaaagaagatctcgg
tcaagagaccggaagcgcctgaggcgttccagaagtagagagagagatcgaagtcgagag
cgaagaagatctcgaagtcgagacaggagacgctccaggagtagaagccgaggccggcga
tccagatcctcaagtcctggcaataaaagcaagaaagctgagaataggtctaggtccaaa
gagaaaacggatagtggggaaagttctaaagagaagaaaaaagacaaagatgacaaggag
gatgaaaaagaaaaagatgctggtaactttgatcagaataagctggaagaagaaatgagg
aagcgaaaagaacgagttgaaaaatggcgagaggagcaacgtaaaaaggccatggaaaac
ataggggaactgaaaaaggaaattgaagagatgaaacaagggaaaaaatggagtttagaa
gatgatgatgatgatgaagatgatcctgcagaagctgaaaaggaaggaaatgaaatggag
ggtgaggagttagatccgttagatgcttacatggaagaagtgaaagaggaagtaaaaaag
tttaatatgcgaagtgtgaagggtggtggagggaatgaaaagaagtctgggccaacagtc
acaaaagttgtcactgtagtgacaaccaaaaaagcagtggtagattctgataagaagaaa
ggtgagctaatggaaaatgaccaggatgccatggagtattcttcagaggaggaagaagtt
gatcttcagacggcccttacaggctaccagacaaaacagagaaagcttctagaaccagtg
gatcatggaaaaattgaatatgaaccgttcagaaaaaacttttatgttgaagttccagaa
ttagcaaaaatgtctcaagaggaggtaaatgtttttcggttggaaatggaaggcattact
gtcaagggaaaaggttgccccaaaccaattaaatcttgggtccagtgtggaatttctatg
aagatcctaaattctctcaaaaagcatggctatgaaaaacccacgccaatccagacccag
gcgattcctgctataatgtctggacgagatttgattggtattgccaagacaggaagcgga
aagaccattgcttttctgttgcccatgtttagacacatcatggatcagaggtcattagaa
gaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacaaatt
actaaagaatgtaagaagttttcaaagaccctgggacttagagtggtctgtgtttatgga
ggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtttgc
acacctggtcgaatgattgacatgttagcagctaacagtggtcgggtcacaaatcttcga
agagtaacatatgttgttttagacgaagcagacagaatgtttgacatgggttttgaacca
caggtcatgcgcattgtggataatgtccgtccggatcgacagacagttatgttttcagct
actttccccagagctatggaggctttggctcgcagaatcctcagtaaacccattgaagtg
caggttggaggcagaagcgtggtttgctcagatgtggaacaacaagtgattgtgattgaa
gaagaaaagaagttcttgaagttacttgagcttctcggccattatcaagaatcgggatct
gtcattatatttgtggataagcaagaacatgcagatggtcttctgaaagatttaatgaga
gcatcttatccttgcatgtctcttcatggaggcattgatcaatatgacagagatagcatc
ataaatgacttcaagaatgggacctgcaaacttctcgtagccacttctgttgctgcccga
ggtttagatgtgaaacatctgattcttgtagtaaattacagctgccccaaccattatgag
gattatgtgcacagagcgggaaggactggaagagcaggcaataaaggttatgcgtatact
tttatcacagaagatcaagctcgctatgctggtgacataattaaagctcttgaattgtca
ggaactgcggtgccttctgatctggagaaactttggagtgatttcaaagatcagcagaaa
gctgaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaagtttgat
gaaacagaacaagctttggccaatgagaggaagaagttgcaaaaagcagctctcggtttg
caagattcagatgatgaggacgctgcagtcgatattgatgaacaaattgaaagtatgttt
aattcaaagaagagagtaaaagatatggctgctcctggaacatctagtgttcctgctcca
actgcgggaaatgctgagaaattagaaatagctaagagactggctcttagaatcaatgct
cagaagaatttgggcattgagtctcaggatgtgatgcaacaggccaccaatgcaattctc
agaggcggcaccatcctggctcccactgtgtctgcaaaaaccattgcagagcaacttgct
gaaaagatcaatgctaagctcaattatgtgcctttggagaaacaagaagaggagaggcaa
gatggtggacagaatgaatcttttaaaagatatgaagaagaattagagatcaatgacttc
ccacagactgctaggtggaaagttacctctaaggaagctctgcagagaattagtgaatat
tctgaagccgcaattacaatcagaggaacatatttcccacctggcaaagaacctaaggaa
ggagagcggaaaatttacttggcaattgaaagtgccaatgaactggctgtgcagaaagca
aaggcagaaatcaccagacttataaaagaagaactgatccggctgcaaaattcataccaa
ccaacaaataaaggaagatacaaagtcttataa
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integrated database retrieval system
