Flavobacterium cyclinae: LOS86_09735
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Entry
LOS86_09735 CDS
T08416
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
fcc
Flavobacterium cyclinae
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcc03021
]
LOS86_09735
Transcription machinery [BR:
fcc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LOS86_09735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
DNA_pol3_delta_C
Sigma70_ECF
HTH_5
UPF0122
Motif
Other DBs
NCBI-ProteinID:
UGS20301
LinkDB
All DBs
Position
complement(2078053..2078568)
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AA seq
171 aa
AA seq
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MNQNEFVQIITPFKDKLFRLAKRMLVSTEEAEDATQEVLVRLWNKNSSLEQYNSVEALAM
TMTKNYCLDQLKSKRATNLQIVHSNYQDKQVSVETQIEHQNTLQWAEKLIGELPEQQRMI
LQLREIEEYEFSEIAQVLEMNETAVRVALSRARKTLREQIEKTHNYGTQVS
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaaacgagtttgtacaaataatcactcctttcaaggataagttatttcgttta
gcgaaacgaatgctcgttagtactgaggaggcagaagacgctacccaggaagtgttggtt
aggttatggaataaaaacagttctttggaacaatacaatagtgtggaagctttagcgatg
acgatgaccaagaattattgtttggatcaacttaaaagtaaaagagctacaaatttgcaa
attgtgcatagcaattatcaagacaagcaagtaagtgttgaaacacaaattgaacatcaa
aatacgttgcaatgggcagaaaagcttataggtgaattaccagaacagcaacgaatgata
ttgcaacttagagaaattgaagaatatgaattttcagaaattgctcaagtattagaaatg
aatgaaacagcggttcgtgtagcgttgtcaagagcgcgaaaaaccttaagagaacaaatt
gaaaaaacacataattatggaactcaagttagttga
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