Folsomia candida: 110860031
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Entry
110860031 CDS
T05043
Name
(RefSeq) transcription elongation factor SPT5-like
KO
K15172
transcription elongation factor SPT5
Organism
fcd
Folsomia candida
Pathway
fcd03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110860031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcd03021
]
110860031
03019 Messenger RNA biogenesis [BR:
fcd03019
]
110860031
Transcription machinery [BR:
fcd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110860031
RNA polymerase I system
110860031
Messenger RNA biogenesis [BR:
fcd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
110860031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
KOW
Spt5_N
CTD
DUF3912
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
110860031
NCBI-ProteinID:
XP_021964775
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
MSSGESSEEEGSPRKFVHSDSDSDHGPGSNKRPPPVHQQDNEEEDEYYSSSEDEDNRAAA
RRKKKKRRTGYSDFIIEEAEVDDEVEEDDEWEDGAEHLISQAEMDEQGPTARDIEGSLRR
KTGLNNMWDAQKEEELEEYLRKKYAEDAVAQRHFGDGNEDMSDEITQQTLLPGIKDPSLW
MVKCRLGEEKITVLQLMRKAIAYSNNNEHEPLQIKSVIAPEGIKGYVYIEAYKQTHVKQA
IEGIGNLRMGLYKQQMVPISEMTDVLRVTKEQTGLKPKQWVRLKRGIYKDDLAQIDYVDL
AQNQCHLKLLPRIDYTRMRGGKKDDKQDDSKRKKKRRPIAKPFNQQDIRDIGGDITSDGD
FLIFESNRYSHKGFLYKTFQLNGILTEGVTPTLAELEKFGEVPIEGLELDGVASAAANTN
LKQEETHNFATGDNVEVAEGELSHLQGKILAIDGNKITIMPRHEDLKDPLDFQPSELRKY
FQQGDHVRVITGKYEGDTGLIVRVEDHCVYLFSDLTMHELKVLPKDLQLCSDMASGVDSM
GHFQWGDLVQLDSQTVGVIVRLEKELFHVLSMQGKVVQVKPQSIQKKRESKYVMGVDSRG
NTIQKRDIVNVVDGSSPDNQGEVRHIFKNYVFLYSRMCLENGGVFVVKSNHLEVAGGVKS
TAPTNVGLGFMSPRLSSPAHPSSGGGGGSAPNILSGGRSPSLGGKISTGSGPRVGRNRDL
IGQTIKITQGHYKGSIGIVKDATETTARVELHSSCQTISVDCNRIQVIGGAGGKTGNVTT
YSKTPRAESTWGKTPAYEGGRTPGYEGGRTPGYQDGSRTPGYEGGRTPGYEGGRTPGYEG
PRTPHHLGSGSTTPARPTSTPDGDDSWEPLGYTTNPQTPGGAYHNTPYTPATPGGYASDH
GYSPYNQQQPSPAGVYNTNPSPVGSYDHNIPSPSSAYHFASTVPSPGGGYGFGGTVGSSP
MTPSAGLGVGFIPPGTPGTGLDPYSTAQSSHTPHTDWLSTGIEVKIKDSIPESGLKRQIG
IVRNVLAGSCAVFLIQEERTVNIISEYLVPVLPRTGDRIKVSTGDHYRESTGTLRSVDGN
DGVVQLDATNLGHDDVLKIFPLNFLCKLVEF
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccggggaatcctccgaggaggaagggtcacctcgaaaattcgtccattcggac
tcagactcagaccacggcccgggttctaataaacgaccgcctcccgttcatcagcaggat
aacgaggaggaggatgagtactactcctcctctgaggacgaggacaaccgcgccgccgca
cgtcgcaagaagaaaaagaggcggacgggatactcggattttatcatcgaggaggcggag
gtcgacgacgaagtggaggaagacgacgaatgggaggatggagccgagcaccttatttcg
caagcagaaatggacgagcagggtcccaccgcccgggacattgaaggcagtttgcgtcga
aaaaccgggctcaacaatatgtgggacgcccaaaaggaagaagaacttgaagagtacctc
cgcaaaaaatacgcggaggacgccgtggcgcaacgacattttggcgacgggaacgaggac
atgtcggacgagataacgcagcaaactctgctcccgggaataaaagacccctccctttgg
atggtcaagtgtcgtttgggagaggagaaaatcaccgttcttcaactgatgagaaaagcg
attgcgtactcgaataataatgaacatgaacctttgcaaattaaatccgtcattgctccg
gaaggaattaaaggatatgtttacattgaagcgtacaaacagacccatgtcaagcaggca
atcgaagggataggaaacctccggatgggcctctacaaacagcaaatggttcccatctcc
gaaatgacggacgtcctccgcgtgacaaaagagcaaacgggattaaagccaaaacaatgg
gttcgattaaaacgagggatctacaaggacgacttggctcaaatcgactacgtcgatcta
gcccagaaccaatgccacttaaaactcctcccacgaattgactacacaagaatgcgcggg
ggtaaaaaagatgataaacaagatgattcaaaacgtaaaaagaaacgtcgcccgatagca
aaacctttcaatcagcaggacattcgcgatatcggaggtgatatcacgtcggatggagat
ttcctcatttttgaatctaatcgttactcacacaaaggatttctttataaaacgtttcaa
ttaaacgggattttaacggaaggggtgactcccacgttagctgagttggagaaatttggt
gaagttccaatcgagggattggaattggatggggttgcctctgctgcggcgaataccaat
ttgaaacaggaggaaacacataatttcgccacgggagataacgtcgaggtcgcggaaggg
gaattgagtcatttacaggggaaaattcttgctattgatgggaataaaattacgattatg
ccgaggcatgaggatttgaaggaccccctcgacttccaaccctctgaactccgcaaatac
ttccaacaaggcgaccacgtccgagtaataaccggaaaatacgaaggcgacaccggccta
atcgtccgcgtggaggatcattgcgtttatctcttctccgacctgacaatgcacgagctg
aaagtcctaccaaaagatctccaactctgttccgatatggcaagcggagtggattcgatg
ggacatttccaatggggcgacctcgtccaattggactcacaaaccgtgggagtaatcgtg
agactagaaaaagaactcttccacgtcctctcaatgcaaggaaaagttgtgcaagtcaaa
ccgcagtctatccagaaaaagcgagagtcaaaatacgtgatgggcgttgattcacgtgga
aatacgattcaaaaacgtgacattgtgaacgtcgtggacggttcgagtccggataaccaa
ggcgaagttagacatatttttaagaactatgttttcctctatagccgaatgtgtttggag
aatggtggagttttcgttgttaaatcaaatcatttggaagttgcgggtggggttaaatcc
actgcgccgacgaatgttgggttgggatttatgtcgccaagattatcctcccctgctcat
cctagtagtggtgggggtggtggaagtgcaccaaatatcctaagtggtggtaggagtcct
tcgttgggtggaaaaatatccaccggatcagggccaagggtcggacgtaacagggattta
attggccaaactattaaaataacacaaggacattacaaaggatcgattgggattgtgaag
gatgcgacggagacgacggcgagggtggaattgcactcgagttgtcaaacgatttccgtg
gattgtaacaggattcaagttatcggaggagcgggtgggaagactgggaatgttactact
tactccaaaacaccaagggcagagagcacgtggggtaaaactcctgcttatgagggtgga
aggacccctgggtatgaagggggcaggactcctgggtatcaggatggctcgaggacgcca
gggtatgaaggtgggaggacgccggggtacgaggggggtaggactcccggttatgaaggc
ccccgcacaccccaccacttgggctccggctccacgacccccgcccggccaacctccact
cccgacggggacgattcctgggaacccctcggttacacgacaaacccacaaacccccgga
ggagcctatcacaacacgccatacacacccgccaccccgggaggctacgcctcagaccat
ggttactccccgtataaccaacagcagccctcacccgccggggtttacaacacaaatccg
agccctgttggttcttatgatcacaatattccaagtccaagcagtgcttaccattttgca
agcacggttccttcgccgggtggtgggtacggatttggtgggacggttgggagtagtccc
atgacgccgagtgcggggttgggcgtgggattcattcctcctgggacgcccggaacgggc
ctggacccgtactccacggcgcaatcgagtcacaccccgcacacggactggttaagcacc
ggaattgaagtgaagataaaggactccattcccgagtctggtctcaagcgacagattgga
atcgttcggaacgtgttggctggaagctgtgccgtgtttctcatccaagaagaacggacg
gttaacattatttccgagtatctcgtccccgtgctcccgaggactggcgaccgaatcaag
gtctcgacgggtgaccactaccgcgagtcaaccggaacgctccgatccgttgacgggaac
gatggcgtggttcaacttgacgctacaaatttaggccacgacgacgttctcaaaatcttt
ccactcaatttcctctgcaaattggtcgaattttaa
DBGET
integrated database retrieval system
