Falco cherrug (Saker falcon): 102050966
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Entry
102050966 CDS
T02911
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03013
Nucleocytoplasmic transport
fch03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102050966 (UPF3A)
03015 mRNA surveillance pathway
102050966 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fch03019
]
102050966 (UPF3A)
Messenger RNA biogenesis [BR:
fch03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102050966 (UPF3A)
mRNA cycle factors
P-body specific factors
102050966 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
102050966
NCBI-ProteinID:
XP_027660678
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MQVVIRRLPPCLTKEQLEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFRNPEDILLF
RDRFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLESYCAD
EEKVCANPEILLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKK
RLREEEKRKRREEERRKRKEVEKQKKFSEKEIRIKLLKKPEKGDELASEKHKEKGEEADI
EEKNWDKSPGSGSIKSKSLEGSLKELKEKSQNDSDKEQRDLERRFREKEPERQRYRLDDG
RKHRAHYEFDKFLRRNEEELKWGKGYNQDRGKKGNYNYGFTVEAVDKLGKEDKCDDMASK
KERIRNKDRPAMQLYQPGARIRTHMGSTSKTYDCSGKSFEDALDKKYEADNSVGGGSEKS
EEAE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtagttattcgacggctccctccttgtctaactaaggagcaactggaggaacag
ctacatcctctacctgcccatgattattttgagttttgcactgctgatcccagcctttat
cctcatctctactcaagagcatacattaactttagaaatcctgaggacatccttcttttt
agagatcgctttgatggctatgtcttcattgataataaaggtttggagtatcctgcagtg
gttgaatttgctccattccagaagatttcaaaaaagaagctgaagaagaaagatgcaaaa
gccgggagcattgaagacgatccagaatataggaaatttttagagagttattgcgctgat
gaagagaaagtctgtgccaatcctgagattcttttgggagagattgaggccaaaacaagg
gaactcattgctagaagaacaacaccccttttggaatatattaaaaatagaaaattagaa
aagcagagaatacgagaagagaaaagagaagagcgaaggcggagagaattggagaagaaa
cgtctgcgggaggaagagaaaaggaagcgtagagaagaagaaagacggaagagaaaagaa
gtggagaaacaaaagaaattttctgaaaaagaaataaggatcaagcttctcaagaagcct
gaaaaaggagatgaactggccagtgaaaagcacaaagaaaaaggtgaagaagctgacatt
gaggaaaaaaactgggataaatcacctggatctgggagtataaaatccaaatctttggag
ggttcactgaaagaacttaaggaaaagtcacaaaatgatagtgacaaagagcaaagagat
ttggagagaagatttcgagaaaaagaacctgaaagacaaaggtatcgactggatgatggc
agaaagcatagagctcactatgagtttgacaagtttttgagaaggaatgaagaagagctg
aaatgggggaaaggatacaaccaagacagaggaaagaaagggaactacaactacggcttc
actgtggaggcagtagacaaactgggtaaagaggacaagtgtgatgacatggcatccaaa
aaggagcgcataagaaataaggatcgcccagccatgcagttataccagccaggagctcgc
attcgaacacatatgggatctacaagtaaaacctatgactgcagtgggaagtcctttgaa
gatgctcttgataaaaagtatgaagcagataattcagttggaggtggttctgagaagagc
gaagaagcagaataa
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