Falco cherrug (Saker falcon): 102056103
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Entry
102056103 CDS
T02911
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102056103 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fch03400
]
102056103 (LIG3)
Enzymes [BR:
fch01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
102056103 (LIG3)
DNA repair and recombination proteins [BR:
fch03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
102056103 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
102056103
NCBI-ProteinID:
XP_005439850
LinkDB
All DBs
Position
Unknown
AA seq
994 aa
AA seq
DB search
MPAGSRTLTQAARALGRATGLFSPQTQVTLPRPYLCCVGLPEASPGYWYQPLLQRVSLQS
AGRKQGGGAGALPFRLLLNTCLRQACTAAEDMAEQRYCVDYAKRGTAGCKKCKEKIVKGM
VRIGKIVPNPFTESGGDMKEWYHVKCIFEKLEKARATTKKIEDITDLEGWEELQDEEKEL
INKHISEANCKAASTPKKKVIVQAKITATGQITTKDPLALITPSPKKFSGFTAKPKNSED
VSADPSHKSSLSAKKCDPKHKDCLLREFRKLCALVAEKPSYNVKTQIIQDFLKKGSGGDG
FHGDVYLTIKLLLPGVIKIVYNLNDKQIVKLFSRIFNCSQEEMIRDLEQGDVSETIRLFF
EQSKSCPPAAKSLLTIQEVDEFLIQLSKLTKEDDQQSVLQRITRRCTGNDLKCIIRLIKH
DLKMNAGAKHVLDALDPNAYEAFKASRNLQDVVERVLKNQQEAEKMPGVKRTLSVQASLM
TPVQPMLAEACKSIEYAMKKCPNGMYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV
AHFKDFIPQAFPGGQSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCI
YFNDISLMDRPLCERRKFLHDNMVEIPNRILFSEMKHVTKASDLADMITRVIREGLEGLV
LKDMKGNYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDP
KSEKWCTVTKCSGGHDDATLARLQTELDMVKISKDPSKIPRWLKINKIYYPDFIVPDPKK
APVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKTATNLQQLKELYQLSKEKADF
SVAAAEEDESMAGSSGENEGNSRSSTPHSTIKTPPSKSPAKAQKPEESKAVIGSPQKSEE
KRGEKRKASEMDDNGNKTLLDIFTGVKLYLSPSVKDFDRIRRYFIAYDGDLVPEFDTASA
THVIGDIDENPDAKRVSPKWIWECIRKRRLVAPC
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcaggcagcaggacactaacacaagcagcccgcgcactcggcagggccacagga
cttttctccccccaaacacaggtcaccttgccaagaccctacctgtgctgcgttgggctc
cccgaggccagccccggttactggtaccagccgctgttacagcgtgtatctctccagtcc
gcaggcagaaaacaggggggtggtgctggggctttgcctttccgtctgcttttgaacact
tgccttcgccaagcctgcacggctgcagaggacatggcagagcagaggtactgcgtagac
tatgccaagcgtggcacggcaggctgcaagaaatgcaaggagaagatcgtgaagggaatg
gtgcgcattggaaagattgtgcccaatcccttcacggagtctggcggggacatgaaggag
tggtaccatgtgaagtgcatttttgagaagctggagaaggcccgggccaccaccaagaaa
atcgaagacatcacagacttggaaggatgggaagagctacaagatgaggagaaagaatta
atcaacaagcacatctcagaagctaattgcaaggctgcaagtacaccgaagaaaaaagtg
atagtccaagctaaaatcactgccacaggacaaataactacaaaagatccattagctctc
atcactccatcaccaaagaagttctctggcttcacagccaagccaaagaattcagaagat
gtctctgcagacccttcccacaagtctagcctatctgcaaaaaaatgtgatccaaagcac
aaagactgcttgctccgagagttcagaaagctctgtgccctggttgctgaaaagcctagc
tataatgtgaagacgcagatcatccaagattttctgaagaagggatctggaggagatggt
tttcatggtgatgtatacttgaccattaagctgctgttaccaggagtcattaaaattgtt
tacaacttgaacgataagcagattgtaaagctgtttagtaggatttttaactgcagccaa
gaagaaatgatccgggacctggaacagggagatgtttcagagaccatccgcctcttcttt
gaacagagcaagtcttgtcctccagctgccaaaagtctcctgaccatccaagaggtggac
gaattcctaatccagctgtcaaagcttactaaggaagatgaccagcaaagtgtgctgcag
cgtatcacgcgcaggtgtacgggcaacgacctgaaatgcatcatcaggctaattaagcat
gacttgaaaatgaatgctggagcaaagcatgtgctagatgctttggatcccaatgcttat
gaggcattcaaagcatcacgcaacctccaggatgtggtagagcgagtcctgaagaaccag
caggaggctgagaagatgccaggtgtgaagcgaaccctcagtgtgcaggcctctctgatg
acccctgttcagcccatgctggctgaagcctgcaagtcaattgagtatgccatgaagaag
tgcccaaatggcatgtatgcagagatcaagtatgatggcgagagggtgcaggtccataaa
aatggagatcatttcagctacttcagcagaagcctcaaacctgtcctcccacataaagta
gcccattttaaggacttcatcccccaggctttccctggtgggcaaagtatgatcctggat
tcagaagttcttttgattgacaacaaaactggcaaaccacttccttttgggactcttggt
gtgcacaagaaagctgctttccaggatgccaacgtttgcttgtttgtgtttgactgcatc
tatttcaatgacatcagcctgatggacaggcctctgtgtgaacgtcgtaagtttctccac
gacaacatggttgaaatccccaaccggatcctcttctcagagatgaagcatgtcacaaaa
gcttcagatctggcagatatgatcacccgagtcatccgtgagggactggaaggactggtg
ttgaaagatatgaagggtaattatgaaccgggaaaacgacactggctgaaagtgaagaag
gactacctgaacgagggtgcaatggctgacacagcagacctggtggtgctgggagctttc
tatggacaaggcagtaaagggggaatgatgtccatcttccttatgggctgctacgatccg
aagagcgagaagtggtgcactgtgaccaagtgttctggtggccatgatgatgccaccttg
gcccgtctgcaaacagagctggatatggtgaagatcagcaaggatcctagtaaaattcca
agatggctaaagatcaacaaaatctactacccagacttcattgtccctgatccaaagaaa
gccccagtgtgggagatcacaggggctgaattctctaaagccgaagcccacactgcagat
gggatctccattcgcttccctcgctgcacccgcattcgagatgacaaagactggaagaca
gccaccaacctccagcagctcaaggagctgtaccaactctccaaagagaaggctgatttc
agcgtggctgctgcggaggaggatgagtccatggctggcagcagtggagagaatgaggga
aattccaggtcttccacaccacacagcactattaaaactcccccaagcaagtcacctgca
aaagctcagaagccagaagagagcaaagcagtcattggatcccctcaaaaatcggaggag
aaacgaggggagaagagaaaagcgtctgagatggatgacaatggaaacaagacactgctg
gacatattcactggtgtgaagctttatctgtcaccctctgtgaaggactttgacagaatc
cggcgctacttcatagcatacgatggggaccttgtgccagagtttgacacagcctcagcg
acacatgttataggggacatcgatgagaatcctgatgctaagcgtgtgtctcccaaatgg
atctgggaatgcatccggaaacggagactggtagccccatgctag
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