KEGG   Falco cherrug (Saker falcon): 102056103Help
Entry
102056103         CDS       T02911                                 

Gene name
LIG3
Definition
(RefSeq) DNA ligase 3
  KO
K10776  
DNA ligase 3 [EC:6.5.1.1]
Organism
fch  Falco cherrug (Saker falcon)
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:fch00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    102056103 (LIG3)
Enzymes [BR:fch01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     102056103 (LIG3)
DNA repair and recombination proteins [BR:fch03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     102056103 (LIG3)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Un
AA seq 994 aa AA seqDB search
MPAGSRTLTQAARALGRATGLFSPQTQVTLPRPYLCCVGLPEASPGYWYQPLLQRVSLQS
AGRKQGGGAGALPFRLLLNTCLRQACTAAEDMAEQRYCVDYAKRGTAGCKKCKEKIVKGM
VRIGKIVPNPFTESGGDMKEWYHVKCIFEKLEKARATTKKIEDITDLEGWEELQDEEKEL
INKHISEANCKAASTPKKKVIVQAKITATGQITTKDPLALITPSPKKFSGFTAKPKNSED
VSADPSHKSSLSAKKCDPKHKDCLLREFRKLCALVAEKPSYNVKTQIIQDFLKKGSGGDG
FHGDVYLTIKLLLPGVIKIVYNLNDKQIVKLFSRIFNCSQEEMIRDLEQGDVSETIRLFF
EQSKSCPPAAKSLLTIQEVDEFLIQLSKLTKEDDQQSVLQRITRRCTGNDLKCIIRLIKH
DLKMNAGAKHVLDALDPNAYEAFKASRNLQDVVERVLKNQQEAEKMPGVKRTLSVQASLM
TPVQPMLAEACKSIEYAMKKCPNGMYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV
AHFKDFIPQAFPGGQSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCI
YFNDISLMDRPLCERRKFLHDNMVEIPNRILFSEMKHVTKASDLADMITRVIREGLEGLV
LKDMKGNYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDP
KSEKWCTVTKCSGGHDDATLARLQTELDMVKISKDPSKIPRWLKINKIYYPDFIVPDPKK
APVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKTATNLQQLKELYQLSKEKADF
SVAAAEEDESMAGSSGENEGNSRSSTPHSTIKTPPSKSPAKAQKPEESKAVIGSPQKSEE
KRGEKRKASEMDDNGNKTLLDIFTGVKLYLSPSVKDFDRIRRYFIAYDGDLVPEFDTASA
THVIGDIDENPDAKRVSPKWIWECIRKRRLVAPC
NT seq 2985 nt NT seq  +upstreamnt  +downstreamnt
atgcccgcaggcagcaggacactaacacaagcagcccgcgcactcggcagggccacagga
cttttctccccccaaacacaggtcaccttgccaagaccctacctgtgctgcgttgggctc
cccgaggccagccccggttactggtaccagccgctgttacagcgtgtatctctccagtcc
gcaggcagaaaacaggggggtggtgctggggctttgcctttccgtctgcttttgaacact
tgccttcgccaagcctgcacggctgcagaggacatggcagagcagaggtactgcgtagac
tatgccaagcgtggcacggcaggctgcaagaaatgcaaggagaagatcgtgaagggaatg
gtgcgcattggaaagattgtgcccaatcccttcacggagtctggcggggacatgaaggag
tggtaccatgtgaagtgcatttttgagaagctggagaaggcccgggccaccaccaagaaa
atcgaagacatcacagacttggaaggatgggaagagctacaagatgaggagaaagaatta
atcaacaagcacatctcagaagctaattgcaaggctgcaagtacaccgaagaaaaaagtg
atagtccaagctaaaatcactgccacaggacaaataactacaaaagatccattagctctc
atcactccatcaccaaagaagttctctggcttcacagccaagccaaagaattcagaagat
gtctctgcagacccttcccacaagtctagcctatctgcaaaaaaatgtgatccaaagcac
aaagactgcttgctccgagagttcagaaagctctgtgccctggttgctgaaaagcctagc
tataatgtgaagacgcagatcatccaagattttctgaagaagggatctggaggagatggt
tttcatggtgatgtatacttgaccattaagctgctgttaccaggagtcattaaaattgtt
tacaacttgaacgataagcagattgtaaagctgtttagtaggatttttaactgcagccaa
gaagaaatgatccgggacctggaacagggagatgtttcagagaccatccgcctcttcttt
gaacagagcaagtcttgtcctccagctgccaaaagtctcctgaccatccaagaggtggac
gaattcctaatccagctgtcaaagcttactaaggaagatgaccagcaaagtgtgctgcag
cgtatcacgcgcaggtgtacgggcaacgacctgaaatgcatcatcaggctaattaagcat
gacttgaaaatgaatgctggagcaaagcatgtgctagatgctttggatcccaatgcttat
gaggcattcaaagcatcacgcaacctccaggatgtggtagagcgagtcctgaagaaccag
caggaggctgagaagatgccaggtgtgaagcgaaccctcagtgtgcaggcctctctgatg
acccctgttcagcccatgctggctgaagcctgcaagtcaattgagtatgccatgaagaag
tgcccaaatggcatgtatgcagagatcaagtatgatggcgagagggtgcaggtccataaa
aatggagatcatttcagctacttcagcagaagcctcaaacctgtcctcccacataaagta
gcccattttaaggacttcatcccccaggctttccctggtgggcaaagtatgatcctggat
tcagaagttcttttgattgacaacaaaactggcaaaccacttccttttgggactcttggt
gtgcacaagaaagctgctttccaggatgccaacgtttgcttgtttgtgtttgactgcatc
tatttcaatgacatcagcctgatggacaggcctctgtgtgaacgtcgtaagtttctccac
gacaacatggttgaaatccccaaccggatcctcttctcagagatgaagcatgtcacaaaa
gcttcagatctggcagatatgatcacccgagtcatccgtgagggactggaaggactggtg
ttgaaagatatgaagggtaattatgaaccgggaaaacgacactggctgaaagtgaagaag
gactacctgaacgagggtgcaatggctgacacagcagacctggtggtgctgggagctttc
tatggacaaggcagtaaagggggaatgatgtccatcttccttatgggctgctacgatccg
aagagcgagaagtggtgcactgtgaccaagtgttctggtggccatgatgatgccaccttg
gcccgtctgcaaacagagctggatatggtgaagatcagcaaggatcctagtaaaattcca
agatggctaaagatcaacaaaatctactacccagacttcattgtccctgatccaaagaaa
gccccagtgtgggagatcacaggggctgaattctctaaagccgaagcccacactgcagat
gggatctccattcgcttccctcgctgcacccgcattcgagatgacaaagactggaagaca
gccaccaacctccagcagctcaaggagctgtaccaactctccaaagagaaggctgatttc
agcgtggctgctgcggaggaggatgagtccatggctggcagcagtggagagaatgaggga
aattccaggtcttccacaccacacagcactattaaaactcccccaagcaagtcacctgca
aaagctcagaagccagaagagagcaaagcagtcattggatcccctcaaaaatcggaggag
aaacgaggggagaagagaaaagcgtctgagatggatgacaatggaaacaagacactgctg
gacatattcactggtgtgaagctttatctgtcaccctctgtgaaggactttgacagaatc
cggcgctacttcatagcatacgatggggaccttgtgccagagtttgacacagcctcagcg
acacatgttataggggacatcgatgagaatcctgatgctaagcgtgtgtctcccaaatgg
atctgggaatgcatccggaaacggagactggtagccccatgctag

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