Falco cherrug (Saker falcon): 102059204
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Entry
102059204 CDS
T02911
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03410
Base excision repair
fch04140
Autophagy - animal
fch04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102059204 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102059204 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
102059204 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fch03036
]
102059204 (HMGB1)
03400 DNA repair and recombination proteins [BR:
fch03400
]
102059204 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fch04147
]
102059204 (HMGB1)
Chromosome and associated proteins [BR:
fch03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
102059204 (HMGB1)
DNA repair and recombination proteins [BR:
fch03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
102059204 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
102059204 (HMGB1)
Exosome [BR:
fch04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
102059204 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
RNA_pol_3_Rpc31
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
102059204
NCBI-ProteinID:
XP_005446526
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKF
EDMAKADKLRYEKEMKNYVPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKVDAGKKVVAKAEK
SKKKKEEEEDEDEDEEDEEDEEEEEEEDEDDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggcgatcctaaaaagccgagaggtaaaatgtcttcatacgccttctttgtg
caaacctgccgggaggagcacaagaagaaacatccagatgcttcagtgaacttttcagag
ttctcaaaaaaatgctcagaacgatggaagactatgtcttctaaggagaaagggaagttt
gaagatatggcaaaggctgacaagcttcgttatgaaaaagaaatgaaaaactatgtacca
cctaagggtgaaacaaaaaagaagttcaaggatccaaatgcaccgaagaggcctccttcg
gcttttttcttgttttgctctgagtttcgtccaaaaatcaaaggagaacatcctggtctg
tccattggggatgttgcaaagaaactgggagaaatgtggaacaacaccgctgcagatgat
aaacagccttatgaaaaaaaggctgctaaactgaaggagaagtatgaaaaggatattgct
gcataccgggccaaagggaaggttgatgcaggcaaaaaagtagttgccaaggccgagaag
agcaagaagaagaaggaggaggaggaagatgaggatgaagatgaagaggatgaagaggat
gaagaagaggaagaggaggaggatgaagatgatgatgatgatgaataa
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