KEGG   Falco cherrug (Saker falcon): 102059204
Entry
102059204         CDS       T02911                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
fch  Falco cherrug (Saker falcon)
Pathway
fch03410  Base excision repair
fch04140  Autophagy - animal
fch04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:fch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102059204 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102059204 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    102059204 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:fch03036]
    102059204 (HMGB1)
   03400 DNA repair and recombination proteins [BR:fch03400]
    102059204 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fch04147]
    102059204 (HMGB1)
Chromosome and associated proteins [BR:fch03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    102059204 (HMGB1)
DNA repair and recombination proteins [BR:fch03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102059204 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     102059204 (HMGB1)
Exosome [BR:fch04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   102059204 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box RNA_pol_3_Rpc31 HMG_box_5
Other DBs
NCBI-GeneID: 102059204
NCBI-ProteinID: XP_005446526
LinkDB
Position
Unknown
AA seq 215 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKF
EDMAKADKLRYEKEMKNYVPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKVDAGKKVVAKAEK
SKKKKEEEEDEDEDEEDEEDEEEEEEEDEDDDDDE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggcgatcctaaaaagccgagaggtaaaatgtcttcatacgccttctttgtg
caaacctgccgggaggagcacaagaagaaacatccagatgcttcagtgaacttttcagag
ttctcaaaaaaatgctcagaacgatggaagactatgtcttctaaggagaaagggaagttt
gaagatatggcaaaggctgacaagcttcgttatgaaaaagaaatgaaaaactatgtacca
cctaagggtgaaacaaaaaagaagttcaaggatccaaatgcaccgaagaggcctccttcg
gcttttttcttgttttgctctgagtttcgtccaaaaatcaaaggagaacatcctggtctg
tccattggggatgttgcaaagaaactgggagaaatgtggaacaacaccgctgcagatgat
aaacagccttatgaaaaaaaggctgctaaactgaaggagaagtatgaaaaggatattgct
gcataccgggccaaagggaaggttgatgcaggcaaaaaagtagttgccaaggccgagaag
agcaagaagaagaaggaggaggaggaagatgaggatgaagatgaagaggatgaagaggat
gaagaagaggaagaggaggaggatgaagatgatgatgatgatgaataa

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