Frederiksenia canicola: A4G17_03340
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Entry
A4G17_03340 CDS
T06481
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
fcl
Frederiksenia canicola
Pathway
fcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A4G17_03340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcl03400
]
A4G17_03340
Enzymes [BR:
fcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A4G17_03340
DNA repair and recombination proteins [BR:
fcl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A4G17_03340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QIM64544
LinkDB
All DBs
Position
676765..680022
Genome browser
AA seq
1085 aa
AA seq
DB search
MFTVYYSNQITHNKDLLIEILKQDPNPNPFSQETVLVQSLGMAQWLQMQLAEKIGVAGNI
QFPYPTNFLWQQYRLLFPELPKENIFDRQIMVWWLMRLLPNYLHLPEFSSLSHYLKEAEQ
LKQYQLAEKIAALFDQYLVYRPHWLVYWEENQLDKVLNEMRNSISFHSKNLPEIETNMQW
QAILWNALVKEIKKQTSEIIFNTSHRAYLQEHYFNKLDNLTLLEKEMLPKRIFIFGISYL
PQTQLSVLKKLSEYCHIHLFFTNPSEFYWANDREDKVLARLALKKHISKDELAALFSEQG
NPLLTSWGKQGKEFLNLLTEYELQSIDYFQPLAEKSLLHQIKNAILNSEYQSELVLDSHD
ESVQIHSCHSKMREIEVLHNQLLYLFEQYPELSPKDIIVMSADIDSYAPYINAVFSVYER
TDARFIPFTLSDQKVNYIDPIISSFLNLLSIKERKFTVEEIFSFFDIQAIREKYQLSDIQ
LGLLREWVELSGIRAGLNQQNPTWANYNSWENGLNRLLLGTSLKAENNPWQGLLAFNESY
GLAAEIIGSLAKFIENLTAWVTFVHKPHTLFDWKTKLIEIVDQFYQSNTEHSATILTIYE
VIETFSSRVEQTNFSEEIEIDIISSVFEQQLSEQRNNLNFLVGKVNFCTLLPMRAIPFKV
VCLLGMNEGEFPRQQVLNNFDLMQYAPQKGDRAKRDDDRYLFLESLLSAQDIFYISYIGQ
SLKDSQPKLPSILVSQLIDYIDERLIDDKTLVVNNHPMTVFSPNNFINSNAYDKEWLKAK
NQYSQSDEFLIHLGSRAELPGEIELSELINYIQSPLKWFFNNQLGIYLESYDQEIKESEN
FYLSALDKFNLLAGLLNIDLQHLSQFFENAKLKGELPACRFAEVSQEELHSSISMLHQVL
SPYLMEPADMIEVNLSLQSSQYAVKLVANVQNKFDDHIIQWRVGDLRDKDIIYCWLNYLV
LKASNSQIARFQFYYRTGKDVGYLSFKSISPDEARNILACYIEDYLASFKQLRWAITQDI
ADYLKKSAAGKTSEIELCQTTMQSSSDVYLKRILVQSDQLDYLDIHQRTLNWFEPMMQHI
EKETK
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgtttactgtttattactccaaccaaattactcacaataaagatctgctgatcgaaatt
ctaaaacaagatccaaatccaaacccatttagccaagaaaccgtgcttgtgcaaagttta
ggaatggcacaatggctacaaatgcagcttgctgagaaaataggggtggcgggtaatatt
caatttccttatcctaccaactttctatggcaacaatatcgtttactctttcccgaattg
ccgaaagaaaatatttttgatcgccaaattatggtttggtggttaatgcgattattaccc
aattacttacatttgccagaatttagctccttatcgcattatttaaaagaggcggaacaa
ttaaaacaatatcaattagctgagaaaattgcggcattatttgaccaatatttagtttat
cgtccccattggcttgtttattgggaagaaaaccaattagataaggttttaaatgaaatg
cgtaatagtatctcttttcatagtaaaaacctacctgaaattgaaacaaatatgcaatgg
caagcgattttatggaatgctttagttaaggaaattaaaaagcagacatcggaaattatt
tttaatacttctcaccgagcctatttgcaagagcattattttaataaattagataacttg
actttgttagaaaaagaaatgctaccaaaacgtatttttatatttggtatttcctatttg
ccacaaacccaattatcggtattaaagaaattaagtgagtattgccacatacatttgttt
tttacgaatccaagtgagttttattgggcaaatgatagagaagataaagtattagcaaga
ttagcgttaaaaaagcatatcagtaaagatgagttagccgcattattttcagaacaaggt
aatccattattaaccagctgggggaaacaaggaaaagagtttctgaatttgcttacagaa
tatgaattgcaaagtatagactatttccaaccgcttgcagaaaaaagtttacttcatcaa
attaaaaatgcaattttaaattcagaatatcaatctgaattagtattagactctcatgat
gagtctgttcagattcactcttgtcatagcaaaatgcgagagattgaagtattacataat
cagttattatatttatttgaacaatatcctgaactttcaccaaaagacattattgtgatg
tcggcagatattgacagttatgccccttatattaatgccgtattttctgtttatgaacgt
actgatgctagatttattccattcacgttatctgaccaaaaagtcaattatattgatccc
attatttctagctttctaaatttattatcaattaaagaacggaaatttactgttgaggag
atcttttcattctttgatattcaggcaattcgagaaaaatatcaattgtccgatattcag
ctaggcttattaagggaatgggttgagctatctggaattcgggctgggctgaatcaacaa
aacccaacgtgggcgaattataactcgtgggaaaatgggttaaatcgtttattgcttggt
acaagccttaaagcggaaaataacccatggcaaggtctgttagcctttaatgaaagttat
ggcttagcggcggaaataatcggatcacttgcaaaatttattgaaaatctgaccgcttgg
gtaacatttgttcataagccacacacattatttgattggaaaacgaaacttattgaaata
gttgatcagttttatcaatcaaatacagagcattcagcaacgatattaacgatctatgag
gtaattgaaactttctcaagccgagtagaacagacgaattttagtgaagaaatcgagatt
gacattatttcttcagtatttgaacagcaattaagtgagcagcgtaataatttaaatttt
cttgttggtaaagtgaatttttgtacgttgttaccgatgagagcgattccttttaaagta
gtctgtttactgggtatgaatgaaggtgagtttcctcgtcagcaagtattaaataatttc
gatttaatgcaatatgctccacaaaaaggtgatcgtgctaaacgtgatgatgatcgttat
ctttttttagaatcgttattgtctgctcaagatattttttatattagttatattggacaa
tctttaaaggatagccaaccaaaattaccttctattttagtgtcacaattaattgattat
atagatgaaaggttaattgatgataagacgttagtggtcaataatcacccgatgactgtt
tttagtccaaataattttatcaatagcaatgcttatgataaagagtggttgaaagcaaaa
aatcaatattcacaatcggatgagtttttaattcatttgggaagtcgtgctgagttgcca
ggtgaaattgagttatcagaattaataaattatattcaatcacctttaaaatggttcttc
aataaccagttaggtatttatttggagagttatgatcaagaaataaaggaatcagaaaat
ttttatctttctgcgctagataagttcaatttattagctggattgttaaatatagattta
cagcatttatcacagttctttgagaatgcaaaattaaaaggggaactacccgcttgtcgt
tttgccgaagttagccaagaagagttacatagctcaatttctatgctacatcaagtatta
tctccttatttaatggagccggcggatatgatagaggttaacttatcgctccaatcttct
caatatgctgttaagttagtcgcgaatgttcaaaataaatttgatgatcatatcattcaa
tggcgtgtaggagatttgcgagataaagatattatttattgttggttaaattatctggta
ttaaaagcaagtaatagccagattgctcgttttcaattttattatcgaacagggaaagac
gtaggctatttgtcttttaaatcaatttcgcctgatgaggcgagaaatatattggcttgc
tatattgaagattatttagccagtttcaaacaacttaggtgggcaataacgcaagatatt
gcggattatttgaaaaaatcggctgcgggaaaaacttctgaaatagagctgtgtcaaacc
acaatgcaatcaagtagtgatgtatatttaaaacgcatattggttcaatcagatcaatta
gattatctcgatatacatcaacgtacattaaattggtttgaaccaatgatgcaacatatt
gaaaaggagaccaaatga
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