Flavobacterium columnare: FCOL_01375
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Entry
FCOL_01375 CDS
T01653
Name
(GenBank) putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
fco
Flavobacterium columnare
Pathway
fco00300
Lysine biosynthesis
fco00470
D-Amino acid metabolism
fco00550
Peptidoglycan biosynthesis
fco01100
Metabolic pathways
fco01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FCOL_01375
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FCOL_01375
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FCOL_01375
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
FCOL_01375
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fco01011
]
FCOL_01375
Enzymes [BR:
fco01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
FCOL_01375
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
FCOL_01375
Peptidoglycan biosynthesis and degradation proteins [BR:
fco01011
]
Precursor biosynthesis
Amino acid ligase
FCOL_01375
Racemase
FCOL_01375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AEW85124
UniProt:
G8X973
LinkDB
All DBs
Position
329556..332000
Genome browser
AA seq
814 aa
AA seq
DB search
MALVLKQIVTALSCEFIEVDSSILIDTVSVDSRSHQNADSTLFFALIGPHHDAHQYIETL
IEQGVKSFVVQTINEKWLGKANFLKVANTLEALQLLATYYRNLFSFPVIGITGSNGKTIV
KEWLNFLLSPDYTIIRSPKSYNSQVGVPLSVIGINEMHNLGIFEAGISTVNEMQNLQKII
QPTIGILTNIGSAHDQGFIDIYEKIKEKLKLFKEVEILILNKNKTIEAFLDPSIKTFTWS
IENKEADVFFEKKEIEQHTDLKVIYKEHCFEISLPFIDEASLENSMHCVLTMLYLGYNDG
VIKDRIAQLYPVEMRLKVKTGIYNSTLIDDSYSSDFQSLKIALDFLQNQNQNPKKTLIIS
DIFQSGLTNEELYSRIAQLIIFNKITKVICIGNRITKYKNKFQNAISFESTASFVNAFDT
LDFSDETILIKGARVFEFEKIVSLLEEKKHETVLEINLNSLSHNFNYYKTKIKPTTKIMG
MVKAFGYGSGSFEIAKLLAHHKVDYLGVAFADEGIELKKAGIEVPIMVMNPEMTSFRSII
QYGLEPEIYSLRGLKAFLKILEEKKQNHYPIHIKINTGMNRLGFDEEIIPELISILKQNK
RIQVNTILSHFAESDNDADRTFSLNQINLFDRLSKQIIEVLEYNPIRHICNSSGISNYPE
GEFDMVRLGVGMYGVSNDLNEMKYLETVGTLKSVISQIRTLKIGDTVGYNRRFVVEKPTR
MAVIPIGYADGISRKWGRGVGYLLVNGEKAPILGSICMDMLMIDVTNISCAEGNEVVVFG
KDLPVTVIANAIDTIPYEILTGISRRVSRIFYRE
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcactggtacttaaacaaattgtaacagcattgtcttgtgaatttatagaagttgat
agttctattctaattgatactgtttcagtagatagtcgatcacatcaaaatgcagattca
acacttttttttgctctcattggcccccatcatgatgcacatcagtatatagaaactctt
atagaacaaggggtgaaatcatttgtagtacagactattaatgaaaaatggttgggtaaa
gctaattttttaaaagtagctaatactttagaagccttgcaattattggctacttattat
agaaatttattttcatttcctgtaataggaattacaggaagtaatggcaaaacaattgta
aaagaatggttaaactttttgttaagtccagattatacaattataagaagtccaaaaagt
tataactctcaagttggagttcctctttcggtaatagggatcaacgaaatgcacaattta
ggtatttttgaagcagggatttctactgtaaatgaaatgcaaaatttgcaaaaaataatt
caacctactattggaattttaacgaatataggttcggctcacgatcaaggttttattgat
atttatgaaaaaataaaagaaaaattaaagctttttaaggaagtagaaattctaattttg
aataaaaataaaacaattgaagcttttttagatccatccataaaaacttttacatggagt
atagaaaataaagaagcagatgttttttttgaaaaaaaagaaatagagcagcataccgat
ttaaaagttatttataaagaacattgttttgaaataagtctcccttttatagatgaagct
tctttagaaaatagtatgcactgtgttttgactatgttgtatctggggtataatgatgga
gttattaaggacagaatagctcaattatatcctgtagaaatgcgattgaaagttaaaacg
ggtatttataatagcactttaatagatgatagttatagttctgattttcagtcgttaaaa
atagcattggattttttgcaaaatcaaaatcaaaacccaaaaaaaactttaattatttcc
gacatttttcagtcaggattaacgaatgaagaactttattctagaatagcacaattaatt
atatttaataaaatcacaaaggtcatttgtattggaaatagaattaccaaatacaagaat
aaatttcagaatgctatttcttttgaatcaacggcttcttttgtaaatgcttttgatacc
cttgatttttcagacgaaaccattttgattaaaggagctcgtgtttttgaatttgaaaaa
attgtttctttattagaagaaaaaaagcatgaaaccgttttagaaattaatttaaattca
ttaagtcataacttcaattattacaaaactaaaatcaaacccacgactaaaataatgggt
atggtaaaagcttttggttacggaagcggaagttttgaaatagcaaaattattagctcat
cataaagtagattatttaggggtagcttttgcagatgaaggaattgagttaaaaaaagca
ggaatagaagtccctattatggttatgaatccagaaatgaccagttttagatctattatt
caatacgggttggaacctgaaatttacagtttacgaggtctgaaagcttttctaaaaatt
ttagaagaaaaaaaacaaaatcactatccaattcatattaagataaatacagggatgaat
cgtttgggttttgatgaagaaataatacctgaattaatatctatattaaaacaaaataaa
aggattcaggttaatactattttatcccattttgccgaaagtgataatgatgcagataga
acatttagtttgaatcaaataaacttatttgatcgcctttctaaacaaattatagaagta
ttagaatacaatccgatccgtcatatttgtaattcctcaggaattagtaattatcctgaa
ggcgagtttgatatggttcgtttaggagtagggatgtatggcgtttctaatgatctaaat
gaaatgaaatatttagaaactgtaggtaccttaaaatctgttatttctcaaatacgaact
ctaaaaataggggataccgttggatacaatagacgttttgttgtagaaaaaccaacacgt
atggctgtaattcctattggttatgcagatggaatatctagaaaatggggtagaggcgta
gggtatcttttagttaatggagaaaaagcacctattttgggaagtatttgtatggatatg
cttatgatagatgttaccaatatatcctgtgcagaaggtaatgaagtagttgtttttgga
aaagatctacctgtaactgttattgcaaacgctatagatactattccgtatgaaatacta
acaggtatttcgcgtcgagtgtcgagaattttctacagggaatag
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