Flavobacterium columnare: FCOL_13205
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Entry
FCOL_13205 CDS
T01653
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
fco
Flavobacterium columnare
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fco03019
]
FCOL_13205
03009 Ribosome biogenesis [BR:
fco03009
]
FCOL_13205
03036 Chromosome and associated proteins [BR:
fco03036
]
FCOL_13205
Enzymes [BR:
fco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
FCOL_13205
Messenger RNA biogenesis [BR:
fco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FCOL_13205
Ribosome biogenesis [BR:
fco03009
]
Eukaryotic type
90S particles
RNase
FCOL_13205
Prokaryotic type
rRNA processing factors
FCOL_13205
Chromosome and associated proteins [BR:
fco03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
FCOL_13205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Mycovirus_RNAse
Motif
Other DBs
NCBI-ProteinID:
AEW87436
UniProt:
G8XBM1
LinkDB
All DBs
Position
3086318..3087064
Genome browser
AA seq
248 aa
AA seq
DB search
MRIIKRIFKKNRFQNPEDGNFFKKITFILGFKPENIEHYRRAFTHRSMNKTDENGYPINY
ERLEFLGDAMLGSVIAAHLFSKVPNGDEGYLTKMRSKIVSREHLNELGKDFKLIEFVETK
VSAQHFGENVHGNIFEAFIGAIYLDKGFDFCEQFIQKKIIKPYVDIDRLEGKVISYKSLF
IEWCQKEKKSFHYETYDDNAAGNVKYFAVKLHLNGEVITKARATSKKKAEEIASKRAYFV
FQSQIDNK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagaattattaagagaatatttaaaaaaaaccgttttcagaaccctgaagacgggaat
ttttttaaaaaaattactttcatcttaggttttaaacctgaaaatattgagcattatcgt
cgcgcttttactcatagatctatgaataaaacagatgaaaacggttatccaataaattat
gaacgacttgaatttttaggagatgcaatgttaggttctgtgatagctgcccatctattt
agtaaggttcctaatggagacgaggggtatttgactaaaatgcgctctaaaatagtttca
cgcgaacatttaaatgaattaggaaaagattttaaattaattgagttcgtagaaacgaaa
gtttccgcacaacattttggcgaaaatgtacacggaaatatttttgaagcttttattgga
gcaatatatttggataaaggatttgatttttgtgaacaatttattcaaaaaaaaataata
aaaccctacgtagatattgatcgtttagaaggcaaagtaataagttataaaagtcttttt
attgagtggtgtcagaaagaaaaaaaatctttccattatgaaacctatgatgataatgct
gctggaaatgtaaaatattttgcagtaaagttacatttaaacggagaggttataacgaaa
gctcgtgccacctctaagaagaaagcggaagaaatagcttctaagagagcttattttgtt
tttcaatcacaaatagacaacaaataa
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