Flavobacterium collinsii: TRV642_1196
Help
Entry
TRV642_1196 CDS
T08703
Name
(GenBank) polysaccharide lyase, family PL1 and CBM77 domain and type A C-terminal secretion signal containing protein precursor
Organism
fcs
Flavobacterium collinsii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM77
Pectate_lyase_4
Por_Secre_tail
Suc_Porlyase_C
Motif
Other DBs
NCBI-ProteinID:
CAI2766203
UniProt:
A0A9W4TFB7
LinkDB
All DBs
Position
TRV642:complement(1259271..1262117)
Genome browser
AA seq
948 aa
AA seq
DB search
MKRNLLILMLLLLTIPLWAQQVQITESSGWLESAFVKWQPVSNAQTYNVYYSGNGITDQK
IDDQLIRSYGSYFRADIPGLKAGSYTLKVKPIISGAEGTGSTTSTLTVSAQDRNGFAFEG
GRVPGGYKADGTPKDNAVILYITQNTKNNISMNITGASANPCVSLQNILYAIKKGKDTRP
FIIRLIGNITDMSVMEGGDVVIENANNAASYLTIEGIGNDAVANGWGVRLKSASNIEVSN
LGFMNCNSTAGDNVGMQQDNDHVWVHNCDLFYGNAGSDADQIKGDGALDNKTSTYITLSY
NHFWDNGKASLLGLSEGTTSGLYITYHHNWFDHSDSRHPRVRYYSAHIYNNYFDGVAKYG
SGSTLGSSLFVEGNYFRNSKHPMLTSLQGTDIWDEANQVNNAGTMGTFSGEAGGSIKAFN
NTFDASNGTNNMRFVAYNDPNPLYNIAGKISSTTDFDAYLATTRGETVSSSVKSKSGANT
YNNFDTDAALYVKNLTIEQPATAKTKVTQYAGRVSGGDLKWTFDNSVDDTSSLVITALKS
ALTNYTGALVAIQGEGNPPTSSQTLTSTANNNQTVSSGTAIASIVFTWGGNATDATVTGL
PASGISFVKNAAAKTITISGTPTATVSYSIATTGTGTPATGSGTITLSAAGTQTLISTNN
NNQTVASGTAIDAIVFTWGGNATDATVTGLPASGISFVKNTAAKTITISGTPTATVSYSV
ATTGTGTPATGSGTLTVTTGTPAGDKIHNFTASGKTSSFYTITGNMNSTNGSVTYAGLTL
TARLKMESSTTITYTTTDPSTLTLVFDSNFTGTVKVNNVSYTASAGIVSATIPAGSNTIT
KGSVANLFYINTEYNSGATLRMAQVANTASEPKASKVILYPNPVADVLYFSESNQVVEKV
FLYNMSGNLVKTSGKETKSMDLSTLISGTYLLKVVTTDGSFTQTVLKK
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaacctacttattctgatgcttttactgctcaccattcccctatgggcacaa
caagttcagattacagaatcttcaggctggctcgagtcagcatttgttaaatggcagcct
gtaagcaatgcacaaacctacaacgtttactactccggtaacggcatcacagaccaaaaa
atcgacgatcagctaattagaagttacggaagttatttccgcgcagacattccgggactt
aaagccggatcgtatacccttaaagtaaaaccgattatttcaggtgcagagggaacagga
tcaacaactagtactttaaccgtttctgctcaggatcgcaacggatttgcttttgaaggc
ggacgtgttcccggaggctacaaagcagatggaactccaaaagacaatgctgttatttta
tacatcacccaaaataccaaaaataacatttcgatgaacatcaccggtgccagtgcaaat
ccttgtgttagtctgcaaaacatactatatgcgatcaaaaaagggaaagacacacgtccg
tttatcattcgtttaattggaaatattaccgacatgtctgtgatggaaggcggagatgtc
gttattgaaaatgccaacaatgcagccagttatcttacaatcgaaggaataggaaatgat
gctgtagccaatggctggggcgtacgtctcaaatcggcatccaacatagaggtaagcaat
cttggttttatgaactgcaacagcactgccggtgacaatgttggcatgcagcaggacaat
gatcacgtttgggtacacaactgtgatttgttctacggaaatgcaggaagcgatgccgat
caaataaaaggagacggagcactcgacaataaaacttctacctacatcaccttatcctac
aaccatttttgggacaacggaaaagcaagtcttttaggtttaagcgagggtactaccagc
ggcctgtatatcacttatcaccacaactggtttgatcactctgattcacgtcatcctcgc
gttcgttattattcggcacacatctacaacaactattttgatggtgtagccaaatacggt
tcggggtctaccttaggctcttccttatttgtggaaggaaattacttccgcaatagtaaa
catcccatgctgacttctttacaggggactgatatctgggacgaagccaatcaggtaaac
aatgccggaactatgggaactttctcaggggaagccggaggatctataaaagccttcaac
aacacttttgacgcttcaaacggaacgaataatatgcgttttgtggcttacaacgatcct
aatccgttatacaatatcgccggaaaaattagctcaacaacagattttgatgcctatctt
gcgactacaagaggcgaaacggtaagcagttcggttaaatccaaatcgggagccaatacc
tacaacaactttgataccgatgctgccttatatgtcaaaaatctaaccatagaacagccg
gcaacagccaaaacgaaggtcactcaatacgcaggacgtgtatcgggaggtgatttaaaa
tggacctttgataatagtgtagacgatacctcttctcttgtaattacagcacttaaatcg
gcacttaccaattatacaggagctttggttgctattcagggagaaggcaatccgcctaca
agttctcagacactaacctcaacagccaataacaatcaaaccgtaagcagcggtactgca
attgcctctatcgtatttacctggggcggaaatgctacagatgccactgtgaccggacta
cctgcatcaggaattagttttgtgaaaaatgctgcagctaaaaccattactatttcagga
actccaaccgctaccgtttcttactctatagccacaaccggtaccggaactcctgctaca
ggttcaggaactatcaccctttcggcagcaggaacacaaaccttaatctcaacaaataat
aacaaccaaactgttgccagtggaacagccattgatgcaattgttttcacttggggagga
aacgcaacagacgctacggtaacaggattgcctgcttcaggaattagttttgtgaaaaat
acggctgccaaaaccatcaccatttctggaactccaaccgctactgtttcttattcggtt
gccacaaccggaaccggaacaccagcaacaggttcaggaacgcttacggttactaccgga
acaccagccggtgataagattcacaactttactgcatcaggaaaaacaagttcattttac
accattacaggaaatatgaattcaactaacggatctgtaacttatgccggattaacgcta
acggcacgtttaaaaatggagtcaagcactacaattacgtatacgaccacagacccttct
actttaactttggtttttgattctaactttaccggaactgttaaagtaaataatgtttcc
tatactgcatcggccggaattgtatccgcaactatccctgcaggttccaataccattaca
aaaggatctgttgccaatctgttctacatcaatacggagtacaacagcggagctacgtta
cgaatggcacaagtagctaacacggcctctgaaccaaaagcttccaaggtgattttatac
cccaatccggttgctgatgtattatatttctcagaatccaatcaggtcgtagagaaagtg
ttcctttataatatgtcaggcaatctggttaaaacctccggaaaagaaactaaaagtatg
gatctaagtactctcatatctggaacttacctgctaaaagtcgttaccactgacggttcc
tttacgcaaactgttcttaaaaaataa
DBGET
integrated database retrieval system
