Flavobacterium collinsii: TRV642_1394
Help
Entry
TRV642_1394 CDS
T08703
Name
(GenBank) glycoside hydrolase, family GH13 lipoprotein precursor. Probable alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs00500
Starch and sucrose metabolism
fcs01100
Metabolic pathways
fcs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
TRV642_1394
Enzymes [BR:
fcs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
TRV642_1394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
CAI2766373
UniProt:
A0A9W4TGA0
LinkDB
All DBs
Position
TRV642:complement(1465549..1467216)
Genome browser
AA seq
555 aa
AA seq
DB search
MKKSIFLFLPLVSLIMSCSGSKSVTMNKENTSKTPFVWEGANVYFLLTDRFYNGDTSNDV
NFNRTKTPGKLRGFEGGDIIGITKKIESGYFSQLGINAIWLTPVVEQIHGGVDEGTGLSY
GFHGYWAKDWTALDPNFGTKEDLANLVKKAHAKGIRIILDGVINHTGPVTPEDPVWPSDW
VRTGVVCDYKSFENTTMCTLVENLPDVKTESTQNVELPPLLIEKWKKEGRYEKEIASLDE
FFKRTGYPRSPKYYIIKWLTDYITVFGIDGYRGDTVKHTEESVWADFKKECDYAFEVWKK
QHPLEVLDQTPFYTIAEVYGYGISGGQDYDFGDRKVNYFQNGFNSMINFEFKWNAAQNNY
EGLFSKYSNHLTNELKGYSVLNYMSSHDDGQPFDAYRVKGIEAGTKLLLCPGMSQVYYGD
ESARPLVIEGTQGDATLRSNMNWDEIQNNPETQKTLLHWQKLGQFRRNHPAVGAGIHHQI
STQPYVFSRTFTKDIYTDKVVISLDLPKGKKELPVGDVFPNGTKLKDTYSNQKVEVIDGR
VSIDSDFDIVLLEKE
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatccattttcctttttttacctttagtatccttaatcatgagttgttctggc
tctaaatcagttacaatgaataaagaaaacacttcaaaaacacccttcgtttgggaagga
gccaatgtttatttcttacttaccgatcgcttttataacggagatacttctaatgacgtt
aacttcaaccgaactaagactccgggaaaattacgtggttttgaaggtggcgatattatt
ggaatcaccaaaaaaatcgaatccggttattttagtcaattaggaatcaatgcgatctgg
ctaactcccgttgtcgagcaaatacatggtggagttgacgaaggaacagggcttagctat
ggttttcatggctattgggcaaaagactggacagcgctggatccaaatttcggaactaaa
gaggacttagccaatttagtcaaaaaagcacatgcgaaaggcatccgaattattctcgac
ggcgttatcaaccatactggcccggtaactcccgaagatcccgtttggccttcagactgg
gtgcgaacgggagtggtttgtgattacaaatcatttgaaaatacaaccatgtgtacctta
gttgagaaccttccggatgtaaaaacagaaagtacacaaaatgtcgaattaccacctctt
ttaatcgaaaaatggaagaaagaaggtcgctatgaaaaagaaatcgcttcattagacgaa
ttctttaaaagaacaggatatccaagaagccctaaatattacattataaaatggctcact
gattatattacagtattcggaattgacggttacagaggtgatactgtaaaacataccgaa
gaaagtgtctgggccgattttaaaaaagaatgtgactatgctttcgaagtctggaaaaaa
caacatcctctggaagttttagatcaaacccccttttatacgattgccgaagtttacggg
tacggaataagtggtgggcaggactatgattttggagatcgaaaagtaaattatttccaa
aacggtttcaacagcatgattaattttgaattcaagtggaacgccgctcaaaacaattat
gaaggtttgttttcgaaatattccaatcatcttactaatgaactgaaaggatattcggtt
ttaaactatatgtcttcacacgatgacggtcagccttttgatgcctatcgtgtaaaaggt
attgaagcgggaaccaaactactcctttgcccgggaatgtcacaggtatattatggtgat
gaatctgcccgacctttagtaatcgaaggcacccagggagatgccactttgcgttctaac
atgaattgggacgaaattcaaaacaacccagaaactcaaaaaacactattgcattggcaa
aaattaggtcagtttagaagaaatcatcccgctgttggtgcaggaatccaccatcaaatt
agcacacaaccttatgttttttcaagaaccttcacaaaagatatctatacggataaagtt
gtaattagcttggatttacccaaaggcaaaaaagaacttcctgttggtgatgtcttccca
aacggaacaaaattaaaagacacctactccaaccagaaagttgaagtaattgatggaaga
gtaagtattgacagcgatttcgacattgttttattggaaaaagaataa
DBGET
integrated database retrieval system
